Chro.30306 | hypothetical protein

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	Chro.30306	SP	0.114033	0.882795	0.003172	CS pos: 22-23. ACC-AV. Pr: 0.2432

No Results

Fasta :-
>Chro.30306 MDSLFSRINIIFCSFIISLACCAVGNFASSFIYKELPIGDTELHSILDLGISPYLRNDQA NIALNINTNLSNSLNWNTNQIFTFIYVSYKNKHQNNYVTVWDDIFSEKKNKTSFSMKGVI NKYPIRDIGRNLRSKSINLNIAFCYMPIVGSIKYHHLKVSIEKKLPVNYFQYK
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/701 Sequence name : 701 Sequence length : 173 VALUES OF COMPUTED PARAMETERS Coef20 : 4.971 CoefTot : 0.448 ChDiff : 8 ZoneTo : 34 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.994 2.476 0.634 0.739 MesoH : -0.176 0.590 -0.219 0.296 MuHd_075 : 18.638 13.915 5.686 4.362 MuHd_095 : 20.559 22.529 7.127 6.621 MuHd_100 : 17.658 18.732 6.910 5.781 MuHd_105 : 16.475 11.298 5.092 4.453 Hmax_075 : 20.183 14.000 4.024 5.020 Hmax_095 : 23.500 23.537 5.430 7.822 Hmax_100 : 23.500 22.400 5.430 8.600 Hmax_105 : 19.900 14.600 5.706 6.659 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8651 0.1349 DFMC : 0.9525 0.0475

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 173 Chro.30306 MDSLFSRINIIFCSFIISLACCAVGNFASSFIYKELPIGDTELHSILDLGISPYLRNDQANIALNINTNLSNSLNWNTNQ 80 IFTFIYVSYKNKHQNNYVTVWDDIFSEKKNKTSFSMKGVINKYPIRDIGRNLRSKSINLNIAFCYMPIVGSIKYHHLKVS 160 IEKKLPVNYFQYK 240 ................................................................................ 80 ................................................................................ 160 ............. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.30306 7 MDSLFSR|IN 0.091 . Chro.30306 34 ASSFIYK|EL 0.081 . Chro.30306 56 GISPYLR|ND 0.083 . Chro.30306 90 FIYVSYK|NK 0.069 . Chro.30306 92 YVSYKNK|HQ 0.072 . Chro.30306 108 DDIFSEK|KN 0.066 . Chro.30306 109 DIFSEKK|NK 0.070 . Chro.30306 111 FSEKKNK|TS 0.066 . Chro.30306 117 KTSFSMK|GV 0.116 . Chro.30306 122 MKGVINK|YP 0.066 . Chro.30306 126 INKYPIR|DI 0.169 . Chro.30306 130 PIRDIGR|NL 0.079 . Chro.30306 133 DIGRNLR|SK 0.395 . Chro.30306 135 GRNLRSK|SI 0.096 . Chro.30306 153 PIVGSIK|YH 0.061 . Chro.30306 158 IKYHHLK|VS 0.063 . Chro.30306 163 LKVSIEK|KL 0.063 . Chro.30306 164 KVSIEKK|LP 0.093 . Chro.30306 173 VNYFQYK|-- 0.071 . ____________________________^_________________

Fasta :-
>Chro.30306 ATGGATTCACTCTTTTCAAGAATAAATATTATCTTTTGCTCATTTATAATTTCTTTGGCA TGCTGTGCAGTTGGAAACTTTGCATCTTCATTTATTTACAAAGAACTCCCAATAGGAGAT ACTGAATTACACTCCATTCTTGACTTAGGAATTAGCCCATATTTAAGGAATGATCAAGCA AATATTGCGCTCAACATTAATACAAACCTTTCTAATTCTTTGAACTGGAATACAAACCAA ATCTTCACATTTATATATGTAAGCTATAAAAATAAACACCAAAATAATTATGTAACAGTT TGGGATGATATTTTTTCAGAAAAAAAAAACAAAACAAGTTTTTCAATGAAAGGAGTGATA AATAAATATCCAATTAGGGATATCGGGAGAAACCTTAGAAGCAAAAGTATAAATCTTAAT ATTGCATTCTGCTACATGCCGATTGTGGGTAGCATTAAATATCACCATTTAAAAGTGTCG ATTGAAAAAAAATTGCCAGTGAATTATTTTCAATATAAATG
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Fasta :-

MDSLFSRINIIFCSFIISLACCAVGNFASSFIYKELPIGDTELHSILDLGISPYLRNDQA NIALNINTNLSNSLNWNTNQIFTFIYVSYKNKHQNNYVTVWDDIFSEKKNKTSFSMKGVI NKYPIRDIGRNLRSKSINLNIAFCYMPIVGSIKYHHLKVSIEKKLPVNYFQYK