Chro.30468 | insulin degrading enzyme

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.30468SP0.2632550.7353670.001378CS pos: 22-23. NFN-YY. Pr: 0.2337
No Results

  • Fasta :-

    >Chro.30468 MFISLKFLFLFGLVYLLPLNFNYYNSENCVKSFSFSNQAHNYDSKSPHIKSVIDDDKFIK SRVDKAKYRYIKFKNGLKAFLVSKEDAEKSEVAILVDVGFLYDPPKIIGLSNLVQYSLLL ASYQYPNINEFHNFIKLLNGRIYLDLHEKSTVYSFTIGTEYLSESIFRFSSYFHSPLLNN DTINKAMLTIFSQLNRMKRSEFWARREIEREIIGLNAKFDTFYYGNKNTLLNNPHLSEGE IYEKVRHYFSKFYSPNNMKLAIVGREPLDKLEKYVIQNFAHIRSNGFNIVRIDDNYKYVG NPFIRISKNIVTIRRFKKTGINTINLRFPIEIQVVN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/709 Sequence name : 709 Sequence length : 336 VALUES OF COMPUTED PARAMETERS Coef20 : 4.320 CoefTot : -1.233 ChDiff : 14 ZoneTo : 42 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.929 2.247 0.231 0.800 MesoH : -0.549 0.317 -0.407 0.261 MuHd_075 : 23.787 18.348 8.515 4.703 MuHd_095 : 23.160 13.005 7.030 3.790 MuHd_100 : 20.160 12.786 7.242 3.086 MuHd_105 : 29.727 17.880 10.374 4.656 Hmax_075 : 6.650 8.167 1.300 2.625 Hmax_095 : 6.388 5.775 0.787 2.336 Hmax_100 : 6.700 8.200 1.351 3.840 Hmax_105 : 7.583 5.483 0.615 2.135 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8494 0.1506 DFMC : 0.8070 0.1930
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 336 Chro.30468 MFISLKFLFLFGLVYLLPLNFNYYNSENCVKSFSFSNQAHNYDSKSPHIKSVIDDDKFIKSRVDKAKYRYIKFKNGLKAF 80 LVSKEDAEKSEVAILVDVGFLYDPPKIIGLSNLVQYSLLLASYQYPNINEFHNFIKLLNGRIYLDLHEKSTVYSFTIGTE 160 YLSESIFRFSSYFHSPLLNNDTINKAMLTIFSQLNRMKRSEFWARREIEREIIGLNAKFDTFYYGNKNTLLNNPHLSEGE 240 IYEKVRHYFSKFYSPNNMKLAIVGREPLDKLEKYVIQNFAHIRSNGFNIVRIDDNYKYVGNPFIRISKNIVTIRRFKKTG 320 INTINLRFPIEIQVVN 400 ................................................................................ 80 ................................................................................ 160 ......................................P......................................... 240 ................................................................................ 320 ................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Chro.30468 6 -MFISLK|FL 0.061 . Chro.30468 31 NSENCVK|SF 0.082 . Chro.30468 45 AHNYDSK|SP 0.078 . Chro.30468 50 SKSPHIK|SV 0.174 . Chro.30468 57 SVIDDDK|FI 0.065 . Chro.30468 60 DDDKFIK|SR 0.068 . Chro.30468 62 DKFIKSR|VD 0.085 . Chro.30468 65 IKSRVDK|AK 0.218 . Chro.30468 67 SRVDKAK|YR 0.103 . Chro.30468 69 VDKAKYR|YI 0.107 . Chro.30468 72 AKYRYIK|FK 0.137 . Chro.30468 74 YRYIKFK|NG 0.080 . Chro.30468 78 KFKNGLK|AF 0.055 . Chro.30468 84 KAFLVSK|ED 0.057 . Chro.30468 89 SKEDAEK|SE 0.077 . Chro.30468 106 FLYDPPK|II 0.072 . Chro.30468 136 EFHNFIK|LL 0.063 . Chro.30468 141 IKLLNGR|IY 0.073 . Chro.30468 149 YLDLHEK|ST 0.073 . Chro.30468 168 LSESIFR|FS 0.096 . Chro.30468 185 NNDTINK|AM 0.060 . Chro.30468 196 IFSQLNR|MK 0.096 . Chro.30468 198 SQLNRMK|RS 0.061 . Chro.30468 199 QLNRMKR|SE 0.774 *ProP* Chro.30468 205 RSEFWAR|RE 0.090 . Chro.30468 206 SEFWARR|EI 0.174 . Chro.30468 210 ARREIER|EI 0.102 . Chro.30468 218 IIGLNAK|FD 0.061 . Chro.30468 227 TFYYGNK|NT 0.060 . Chro.30468 244 EGEIYEK|VR 0.051 . Chro.30468 246 EIYEKVR|HY 0.104 . Chro.30468 251 VRHYFSK|FY 0.115 . Chro.30468 259 YSPNNMK|LA 0.066 . Chro.30468 265 KLAIVGR|EP 0.095 . Chro.30468 270 GREPLDK|LE 0.069 . Chro.30468 273 PLDKLEK|YV 0.085 . Chro.30468 283 QNFAHIR|SN 0.154 . Chro.30468 291 NGFNIVR|ID 0.075 . Chro.30468 297 RIDDNYK|YV 0.078 . Chro.30468 305 VGNPFIR|IS 0.090 . Chro.30468 308 PFIRISK|NI 0.113 . Chro.30468 314 KNIVTIR|RF 0.092 . Chro.30468 315 NIVTIRR|FK 0.180 . Chro.30468 317 VTIRRFK|KT 0.142 . Chro.30468 318 TIRRFKK|TG 0.282 . Chro.30468 327 INTINLR|FP 0.084 . ____________________________^_________________

  • Fasta :-

    >Chro.30468 ATGTTTATAAGCTTGAAGTTTCTATTTCTTTTTGGTTTGGTTTATTTATTGCCATTAAAC TTTAATTACTATAATTCTGAAAACTGTGTGAAAAGCTTTTCATTTTCAAACCAGGCTCAT AATTACGATTCTAAGAGCCCACACATTAAATCAGTGATTGATGACGATAAATTTATAAAA TCCAGAGTTGATAAAGCAAAATATCGCTATATTAAATTTAAAAACGGTTTGAAGGCTTTT TTAGTAAGCAAAGAAGATGCAGAAAAGTCTGAAGTTGCAATTTTAGTTGATGTCGGGTTT CTTTACGACCCTCCAAAAATTATTGGATTATCAAATTTAGTGCAATATAGCCTTTTGTTA GCTTCTTATCAATATCCAAATATAAATGAGTTCCATAACTTTATAAAGCTATTGAATGGA AGAATATATTTGGACCTTCATGAAAAATCTACAGTATATTCATTTACAATAGGCACTGAA TACCTTAGTGAAAGCATATTCAGATTTAGTAGCTATTTCCATAGTCCTTTGTTGAATAAT GATACTATTAACAAAGCAATGCTAACAATATTTAGCCAGTTAAATAGAATGAAAAGAAGT GAATTCTGGGCAAGAAGAGAAATTGAAAGAGAAATAATTGGCTTAAATGCTAAATTTGAC ACATTCTATTATGGAAATAAAAATACTCTATTAAATAATCCACATTTATCAGAAGGAGAG ATCTATGAAAAAGTTCGTCACTATTTCTCAAAATTCTATTCACCTAATAACATGAAACTT GCTATAGTTGGAAGAGAACCTCTTGACAAATTGGAAAAATATGTAATTCAGAACTTTGCT CATATTAGAAGTAACGGTTTTAATATAGTAAGAATTGATGATAACTATAAATATGTTGGA AACCCTTTCATTAGAATCTCAAAGAACATTGTTACTATACGGAGATTTAAAAAAACTGGG ATTAACACAATCAATCTCCGATTTCCAATTGAAATACAAGTTGTTAATTGA
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  • Fasta :-

    MFISLKFLFLFGLVYLLPLNFNYYNSENCVKSFSFSNQAHNYDSKSPHIKSVIDDDKFIK SRVDKAKYRYIKFKNGLKAFLVSKEDAEKSEVAILVDVGFLYDPPKIIGLSNLVQYSLLL ASYQYPNINEFHNFIKLLNGRIYLDLHEKSTVYSFTIGTEYLSESIFRFSSYFHSPLLNN DTINKAMLTIFSQLNRMKRSEFWARREIEREIIGLNAKFDTFYYGNKNTLLNNPHLSEGE IYEKVRHYFSKFYSPNNMKLAIVGREPLDKLEKYVIQNFAHIRSNGFNIVRIDDNYKYVG NPFIRISKNIVTIRRFKKTGINTINLRFPIEIQVVN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.3046851 SPHIKSVIDD0.995unspChro.3046883 SAFLVSKEDA0.997unsp

Chro.30468      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India