Chro.30482 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.30482OTHER0.9996450.0003340.000021
No Results

  • Fasta :-

    >Chro.30482 MSLPPNLFPEDLSFPYSPKKLEVIFSIISFLFLRSFEDIKYYYNKLSTSLSFSINTPTIF SFYTYGIILEISGITDNLPHAISTIASRIKEFPNTVKASDLTVAKDYYLRYIRNNNFEHL PAIQFQSILKILLFNQNLTTCSVNNEIKEIKLNEITNAIDFLVKNGTFEGIIYGNINPIK ARELLLLFFINLGRTSAEEKNINKRSNIFLKILISVKKIFFGCFNHIKYFIYKFTGNFTL QSEPPVHLKSIPTQNITQNSLKDLQVIDLLSFKEGTNFVYFEKSKFDSFQFHTLILKICF GIFHS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/15 Sequence name : 15 Sequence length : 305 VALUES OF COMPUTED PARAMETERS Coef20 : 2.974 CoefTot : -0.537 ChDiff : 7 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.441 1.800 0.178 0.634 MesoH : 0.021 0.530 -0.233 0.319 MuHd_075 : 24.387 16.625 6.868 3.999 MuHd_095 : 13.931 9.437 3.711 3.161 MuHd_100 : 11.225 7.222 2.552 2.948 MuHd_105 : 8.786 5.541 1.542 2.402 Hmax_075 : 13.900 11.800 1.939 4.400 Hmax_095 : 8.750 7.500 -0.298 3.840 Hmax_100 : 9.400 3.200 -0.221 3.560 Hmax_105 : 9.900 6.183 -0.286 3.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9870 0.0130 DFMC : 0.9818 0.0182
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 305 Chro.30482 MSLPPNLFPEDLSFPYSPKKLEVIFSIISFLFLRSFEDIKYYYNKLSTSLSFSINTPTIFSFYTYGIILEISGITDNLPH 80 AISTIASRIKEFPNTVKASDLTVAKDYYLRYIRNNNFEHLPAIQFQSILKILLFNQNLTTCSVNNEIKEIKLNEITNAID 160 FLVKNGTFEGIIYGNINPIKARELLLLFFINLGRTSAEEKNINKRSNIFLKILISVKKIFFGCFNHIKYFIYKFTGNFTL 240 QSEPPVHLKSIPTQNITQNSLKDLQVIDLLSFKEGTNFVYFEKSKFDSFQFHTLILKICFGIFHS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.30482 19 SFPYSPK|KL 0.073 . Chro.30482 20 FPYSPKK|LE 0.070 . Chro.30482 34 ISFLFLR|SF 0.135 . Chro.30482 40 RSFEDIK|YY 0.071 . Chro.30482 45 IKYYYNK|LS 0.061 . Chro.30482 88 ISTIASR|IK 0.077 . Chro.30482 90 TIASRIK|EF 0.064 . Chro.30482 97 EFPNTVK|AS 0.055 . Chro.30482 105 SDLTVAK|DY 0.062 . Chro.30482 110 AKDYYLR|YI 0.088 . Chro.30482 113 YYLRYIR|NN 0.107 . Chro.30482 130 QFQSILK|IL 0.056 . Chro.30482 148 SVNNEIK|EI 0.073 . Chro.30482 151 NEIKEIK|LN 0.061 . Chro.30482 164 AIDFLVK|NG 0.054 . Chro.30482 180 GNINPIK|AR 0.067 . Chro.30482 182 INPIKAR|EL 0.086 . Chro.30482 194 FFINLGR|TS 0.069 . Chro.30482 200 RTSAEEK|NI 0.068 . Chro.30482 204 EEKNINK|RS 0.058 . Chro.30482 205 EKNINKR|SN 0.226 . Chro.30482 211 RSNIFLK|IL 0.079 . Chro.30482 217 KILISVK|KI 0.061 . Chro.30482 218 ILISVKK|IF 0.116 . Chro.30482 228 GCFNHIK|YF 0.073 . Chro.30482 233 IKYFIYK|FT 0.090 . Chro.30482 249 EPPVHLK|SI 0.098 . Chro.30482 262 ITQNSLK|DL 0.075 . Chro.30482 273 IDLLSFK|EG 0.054 . Chro.30482 283 NFVYFEK|SK 0.082 . Chro.30482 285 VYFEKSK|FD 0.078 . Chro.30482 297 FHTLILK|IC 0.059 . ____________________________^_________________

  • Fasta :-

    >Chro.30482 ATGAGTCTTCCACCAAATTTATTTCCTGAAGATCTATCTTTTCCATACTCTCCAAAAAAA CTTGAAGTAATTTTTTCAATAATATCATTTTTGTTTCTAAGGTCTTTTGAAGATATTAAA TATTATTACAATAAGTTGTCAACCAGCTTAAGTTTCTCAATTAATACACCAACCATTTTT TCCTTCTATACATATGGAATAATTCTAGAAATTTCAGGAATTACAGATAATCTTCCTCAT GCAATATCAACTATTGCATCTCGCATTAAAGAATTTCCAAATACTGTGAAAGCTTCTGAT TTAACTGTTGCAAAGGATTATTATTTAAGGTACATAAGAAATAATAACTTTGAGCATTTA CCTGCAATTCAATTTCAATCTATATTAAAGATTTTATTGTTTAATCAAAATTTGACAACT TGTTCAGTCAATAATGAAATTAAAGAGATTAAATTAAATGAAATTACTAACGCTATTGAT TTCCTTGTAAAAAATGGGACATTTGAAGGTATAATCTATGGAAATATTAATCCAATTAAA GCAAGAGAACTCCTATTATTATTTTTCATAAATCTTGGTAGAACTTCAGCTGAAGAAAAA AATATAAACAAAAGATCAAATATTTTCTTAAAAATACTTATCTCGGTTAAAAAGATTTTC TTTGGTTGTTTTAATCACATTAAATATTTTATTTATAAATTTACTGGAAATTTTACCTTA CAAAGTGAACCTCCCGTACATTTAAAGTCAATTCCTACACAAAATATAACGCAAAATTCT CTGAAAGATCTTCAAGTCATTGATTTGCTTTCATTTAAAGAAGGAACTAATTTCGTTTAT TTTGAAAAGTCTAAATTTGATTCTTTCCAATTTCATACATTAATTCTGAAAATATGCTTT GGGATATTTCACAGTTGA
  • Download Fasta

  • Fasta :-

    MSLPPNLFPEDLSFPYSPKKLEVIFSIISFLFLRSFEDIKYYYNKLSTSLSFSINTPTIF SFYTYGIILEISGITDNLPHAISTIASRIKEFPNTVKASDLTVAKDYYLRYIRNNNFEHL PAIQFQSILKILLFNQNLTTCSVNNEIKEIKLNEITNAIDFLVKNGTFEGIIYGNINPIK ARELLLLFFINLGRTSAEEKNINKRSNIFLKILISVKKIFFGCFNHIKYFIYKFTGNFTL QSEPPVHLKSIPTQNITQNSLKDLQVIDLLSFKEGTNFVYFEKSKFDSFQFHTLILKICF GIFHS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.30482196 SLGRTSAEEK0.993unspChro.30482196 SLGRTSAEEK0.993unspChro.30482196 SLGRTSAEEK0.993unspChro.3048217 SSFPYSPKKL0.992unspChro.3048235 SLFLRSFEDI0.991unsp

Chro.30482      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India