Chro.40035 | ubiquitin-conjugating enzyme

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.40035OTHER0.9998720.0001130.000015
No Results

  • Fasta :-

    >Chro.40035 MGTPYEGGIFQLDIIVPKEYPYEPPKVKFITRIWHPNISSQTGAICLDILKDAWSPALTL RTVMLSIQALLSSPEPNDPQDALVASLYKSDYQEYIETAKSWTQMYAKPTSKEERIKRFL DMGFNRESIITALERNNWDENLALNELLFEN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/679 Sequence name : 679 Sequence length : 151 VALUES OF COMPUTED PARAMETERS Coef20 : 2.685 CoefTot : -0.660 ChDiff : -6 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.259 0.023 0.449 MesoH : -0.603 0.204 -0.400 0.204 MuHd_075 : 12.431 12.226 2.964 3.188 MuHd_095 : 17.783 10.836 5.286 3.266 MuHd_100 : 14.577 11.891 4.414 3.363 MuHd_105 : 7.588 9.967 2.708 2.347 Hmax_075 : 18.317 19.717 3.605 7.350 Hmax_095 : 12.000 11.100 1.774 5.100 Hmax_100 : 15.300 17.200 3.196 6.380 Hmax_105 : 13.883 17.850 3.570 6.697 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9953 0.0047 DFMC : 0.9949 0.0051
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 151 Chro.40035 MGTPYEGGIFQLDIIVPKEYPYEPPKVKFITRIWHPNISSQTGAICLDILKDAWSPALTLRTVMLSIQALLSSPEPNDPQ 80 DALVASLYKSDYQEYIETAKSWTQMYAKPTSKEERIKRFLDMGFNRESIITALERNNWDENLALNELLFEN 160 ................................................................................ 80 .....................................P................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Chro.40035 18 LDIIVPK|EY 0.064 . Chro.40035 26 YPYEPPK|VK 0.063 . Chro.40035 28 YEPPKVK|FI 0.073 . Chro.40035 32 KVKFITR|IW 0.124 . Chro.40035 51 ICLDILK|DA 0.059 . Chro.40035 61 SPALTLR|TV 0.153 . Chro.40035 89 LVASLYK|SD 0.076 . Chro.40035 100 EYIETAK|SW 0.082 . Chro.40035 108 WTQMYAK|PT 0.088 . Chro.40035 112 YAKPTSK|EE 0.058 . Chro.40035 115 PTSKEER|IK 0.102 . Chro.40035 117 SKEERIK|RF 0.068 . Chro.40035 118 KEERIKR|FL 0.768 *ProP* Chro.40035 126 LDMGFNR|ES 0.083 . Chro.40035 135 IITALER|NN 0.083 . ____________________________^_________________

  • Fasta :-

    >Chro.40035 ATGGGAACACCATATGAAGGAGGTATATTTCAACTTGATATTATTGTACCAAAAGAATAT CCATACGAGCCTCCAAAAGTTAAATTCATCACAAGAATTTGGCATCCGAATATTTCTAGT CAAACAGGAGCTATTTGCTTGGATATTTTAAAAGATGCCTGGAGTCCTGCTTTAACTCTT AGAACAGTAATGCTTTCTATACAAGCATTACTCTCCTCTCCTGAACCAAATGATCCCCAA GATGCATTGGTCGCATCTCTATACAAAAGTGATTACCAAGAATATATTGAAACGGCCAAA AGTTGGACACAAATGTATGCAAAGCCAACATCAAAGGAAGAAAGGATTAAGAGATTTCTT GATATGGGATTCAACCGTGAATCTATAATAACAGCACTAGAAAGAAATAATTGGGATGAA AATCTCGCTCTAAATGAGCTATTATTTGAAAACTAA
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  • Fasta :-

    MGTPYEGGIFQLDIIVPKEYPYEPPKVKFITRIWHPNISSQTGAICLDILKDAWSPALTL RTVMLSIQALLSSPEPNDPQDALVASLYKSDYQEYIETAKSWTQMYAKPTSKEERIKRFL DMGFNRESIITALERNNWDENLALNELLFEN

  • title: active site cysteine
  • coordinates: C46
No Results
No Results
IDSitePeptideScoreMethod
Chro.40035111 SAKPTSKEER0.995unsp

Chro.40035      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India