Chro.50094 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.50094OTHER0.9951650.0025050.002330
No Results

  • Fasta :-

    >Chro.50094 MLQERNDRQTSNGFKPKVWLWNSFFYTKLTCDQSNDETGYCYKNVSRWTQRKKIDLFNYD IILLPINVNNVHWTLGVVNFKLGYIQYIDSLGGQFQDHLGCTKMSSIFFQNMNRYIQDEY FDKKKEKFPGQLKHFTRFSEPVPQQNNGSDCGVFTCMFAECISEGRSFDFDTTQIDRIRE VMLVECIKNEIF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/307 Sequence name : 307 Sequence length : 192 VALUES OF COMPUTED PARAMETERS Coef20 : 3.681 CoefTot : -0.033 ChDiff : 0 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.706 1.188 0.096 0.554 MesoH : -0.807 0.017 -0.505 0.177 MuHd_075 : 12.772 4.213 2.781 0.820 MuHd_095 : 25.898 14.402 5.844 5.675 MuHd_100 : 19.264 7.229 3.901 4.239 MuHd_105 : 14.337 5.216 2.427 3.019 Hmax_075 : -18.375 -5.717 -6.647 -1.528 Hmax_095 : -5.600 -1.050 -3.969 0.613 Hmax_100 : -9.000 -5.000 -5.613 -0.400 Hmax_105 : -8.200 -2.800 -5.367 -0.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8802 0.1198 DFMC : 0.9237 0.0763
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 192 Chro.50094 MLQERNDRQTSNGFKPKVWLWNSFFYTKLTCDQSNDETGYCYKNVSRWTQRKKIDLFNYDIILLPINVNNVHWTLGVVNF 80 KLGYIQYIDSLGGQFQDHLGCTKMSSIFFQNMNRYIQDEYFDKKKEKFPGQLKHFTRFSEPVPQQNNGSDCGVFTCMFAE 160 CISEGRSFDFDTTQIDRIREVMLVECIKNEIF 240 ................................................................................ 80 ................................................................................ 160 ................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50094 5 --MLQER|ND 0.080 . Chro.50094 8 LQERNDR|QT 0.300 . Chro.50094 15 QTSNGFK|PK 0.062 . Chro.50094 17 SNGFKPK|VW 0.068 . Chro.50094 28 NSFFYTK|LT 0.066 . Chro.50094 43 ETGYCYK|NV 0.073 . Chro.50094 47 CYKNVSR|WT 0.086 . Chro.50094 51 VSRWTQR|KK 0.094 . Chro.50094 52 SRWTQRK|KI 0.099 . Chro.50094 53 RWTQRKK|ID 0.082 . Chro.50094 81 LGVVNFK|LG 0.060 . Chro.50094 103 DHLGCTK|MS 0.062 . Chro.50094 114 FFQNMNR|YI 0.099 . Chro.50094 123 QDEYFDK|KK 0.067 . Chro.50094 124 DEYFDKK|KE 0.070 . Chro.50094 125 EYFDKKK|EK 0.106 . Chro.50094 127 FDKKKEK|FP 0.095 . Chro.50094 133 KFPGQLK|HF 0.053 . Chro.50094 137 QLKHFTR|FS 0.178 . Chro.50094 166 ECISEGR|SF 0.108 . Chro.50094 177 DTTQIDR|IR 0.071 . Chro.50094 179 TQIDRIR|EV 0.144 . Chro.50094 188 MLVECIK|NE 0.059 . ____________________________^_________________

  • Fasta :-

    >Chro.50094 ATGCTTCAAGAAAGAAATGATCGTCAAACTTCCAATGGATTTAAGCCTAAGGTATGGCTT TGGAATTCTTTCTTTTACACAAAATTAACATGTGATCAAAGCAATGATGAAACAGGATAT TGTTATAAAAATGTTTCAAGATGGACACAGAGAAAAAAAATTGACTTATTTAATTATGAT ATTATACTTTTACCTATTAATGTCAATAATGTACATTGGACTTTGGGTGTTGTTAATTTT AAGCTTGGATATATTCAGTACATAGATTCATTAGGCGGGCAATTTCAAGACCATTTGGGC TGCACAAAGATGTCATCCATATTCTTTCAAAACATGAATAGATATATACAGGATGAATAT TTTGATAAAAAAAAGGAGAAATTTCCAGGCCAGTTGAAGCATTTTACGAGGTTTTCGGAA CCAGTTCCACAACAGAATAATGGCTCAGATTGTGGGGTATTCACATGTATGTTTGCTGAG TGTATTTCTGAAGGAAGGTCTTTTGATTTTGACACAACTCAAATTGACAGGATTCGTGAG GTTATGTTAGTGGAATGTATTAAAAATGAAATATTTTGA
  • Download Fasta

  • Fasta :-

    MLQERNDRQTSNGFKPKVWLWNSFFYTKLTCDQSNDETGYCYKNVSRWTQRKKIDLFNYD IILLPINVNNVHWTLGVVNFKLGYIQYIDSLGGQFQDHLGCTKMSSIFFQNMNRYIQDEY FDKKKEKFPGQLKHFTRFSEPVPQQNNGSDCGVFTCMFAECISEGRSFDFDTTQIDRIRE VMLVECIKNEIF

    No Results
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Chro.50094      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India