Chro.50180 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.50180OTHER0.9975350.0024390.000027
No Results

  • Fasta :-

    >Chro.50180 MEISPKVWFLIPSNGSDYSEFNVCIPNKKYHTTLTKSHFKIYTCKNVDFIRNLKLCRLNL ELEELVSFSEDNSQWEETNNFEIIINDYMQYSIILSIYINNTYNSNQLFMLRLKSDDHHI ISIDESQNEFINFSLRSRLIEINTCLIRDYLLKGLNKIEINGTPGQIHCFGEKTFGLFWG KNHNRGSFGWCSGITLYGEGAILSFSHESFLIDKNGHQILNIILENFYKFKGETKKDKCI GFLGFSNSESSEFINSISKNNFDYFKGSFFEYVELESIEKSVSNNELNILVINGNKEKKN TVNETKLSSKILKNYICSGGLLIIGLCPWGWEYISGGKVNSNSISNDINKEMGMIFTNEY FCNEVSSVNSKNLSNYFSSSIYYWKKLLKSMNGTENDTKLNLDEYFIMTKDIECHLNMDI KTSEQNKILNLIAQLLKKRNYLNLKPPFNMEEKINILYMAIACSRLKEDKIHEICDLEGD KYTFDDFDDWISMNQFWKIESNITNSLLREEHAELNLSRNELHCPVYDIPFEWQNTGVYI KHRSFLKAEFIPINKYSLTPIKSKLHVGSHSDFLRYKEEKIMRRVPLVKKIYNWSISETN NITIESPCEGIVYFEYIPNNDHTNTKGSLKKPNSNEPHGHLIGFIKFIPLIGKEVITTPI YTIDKLQLDTCSFDNRTIITDKYLWARIFSEANRKFSNLLPAWTELHGKKIILTIPSRIL YRINCLIVDDLLEFWDKVIDTQNELYFNYKWTKERIVCDIQISDGYMHSGKFLFFFD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/38 Sequence name : 38 Sequence length : 777 VALUES OF COMPUTED PARAMETERS Coef20 : 3.363 CoefTot : -0.778 ChDiff : -8 ZoneTo : 16 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.718 1.618 0.372 0.695 MesoH : -0.468 0.180 -0.379 0.217 MuHd_075 : 13.046 3.377 2.582 0.787 MuHd_095 : 30.467 14.736 8.148 4.850 MuHd_100 : 26.646 12.261 6.315 4.499 MuHd_105 : 14.877 9.978 2.988 3.114 Hmax_075 : 6.883 5.017 -1.275 3.220 Hmax_095 : 12.100 11.800 1.443 5.270 Hmax_100 : 11.900 11.400 0.793 4.510 Hmax_105 : 6.212 9.200 -1.124 3.264 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9920 0.0080 DFMC : 0.9915 0.0085
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 777 Chro.50180 MEISPKVWFLIPSNGSDYSEFNVCIPNKKYHTTLTKSHFKIYTCKNVDFIRNLKLCRLNLELEELVSFSEDNSQWEETNN 80 FEIIINDYMQYSIILSIYINNTYNSNQLFMLRLKSDDHHIISIDESQNEFINFSLRSRLIEINTCLIRDYLLKGLNKIEI 160 NGTPGQIHCFGEKTFGLFWGKNHNRGSFGWCSGITLYGEGAILSFSHESFLIDKNGHQILNIILENFYKFKGETKKDKCI 240 GFLGFSNSESSEFINSISKNNFDYFKGSFFEYVELESIEKSVSNNELNILVINGNKEKKNTVNETKLSSKILKNYICSGG 320 LLIIGLCPWGWEYISGGKVNSNSISNDINKEMGMIFTNEYFCNEVSSVNSKNLSNYFSSSIYYWKKLLKSMNGTENDTKL 400 NLDEYFIMTKDIECHLNMDIKTSEQNKILNLIAQLLKKRNYLNLKPPFNMEEKINILYMAIACSRLKEDKIHEICDLEGD 480 KYTFDDFDDWISMNQFWKIESNITNSLLREEHAELNLSRNELHCPVYDIPFEWQNTGVYIKHRSFLKAEFIPINKYSLTP 560 IKSKLHVGSHSDFLRYKEEKIMRRVPLVKKIYNWSISETNNITIESPCEGIVYFEYIPNNDHTNTKGSLKKPNSNEPHGH 640 LIGFIKFIPLIGKEVITTPIYTIDKLQLDTCSFDNRTIITDKYLWARIFSEANRKFSNLLPAWTELHGKKIILTIPSRIL 720 YRINCLIVDDLLEFWDKVIDTQNELYFNYKWTKERIVCDIQISDGYMHSGKFLFFFD 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ......................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50180 6 -MEISPK|VW 0.061 . Chro.50180 28 NVCIPNK|KY 0.067 . Chro.50180 29 VCIPNKK|YH 0.094 . Chro.50180 36 YHTTLTK|SH 0.076 . Chro.50180 40 LTKSHFK|IY 0.065 . Chro.50180 45 FKIYTCK|NV 0.085 . Chro.50180 51 KNVDFIR|NL 0.082 . Chro.50180 54 DFIRNLK|LC 0.077 . Chro.50180 57 RNLKLCR|LN 0.074 . Chro.50180 112 NQLFMLR|LK 0.082 . Chro.50180 114 LFMLRLK|SD 0.077 . Chro.50180 136 FINFSLR|SR 0.119 . Chro.50180 138 NFSLRSR|LI 0.096 . Chro.50180 148 INTCLIR|DY 0.080 . Chro.50180 153 IRDYLLK|GL 0.082 . Chro.50180 157 LLKGLNK|IE 0.061 . Chro.50180 173 IHCFGEK|TF 0.057 . Chro.50180 181 FGLFWGK|NH 0.058 . Chro.50180 185 WGKNHNR|GS 0.102 . Chro.50180 214 ESFLIDK|NG 0.065 . Chro.50180 229 ILENFYK|FK 0.074 . Chro.50180 231 ENFYKFK|GE 0.074 . Chro.50180 235 KFKGETK|KD 0.059 . Chro.50180 236 FKGETKK|DK 0.179 . Chro.50180 238 GETKKDK|CI 0.082 . Chro.50180 259 FINSISK|NN 0.064 . Chro.50180 266 NNFDYFK|GS 0.065 . Chro.50180 280 ELESIEK|SV 0.095 . Chro.50180 296 LVINGNK|EK 0.053 . Chro.50180 298 INGNKEK|KN 0.070 . Chro.50180 299 NGNKEKK|NT 0.101 . Chro.50180 306 NTVNETK|LS 0.075 . Chro.50180 310 ETKLSSK|IL 0.064 . Chro.50180 313 LSSKILK|NY 0.077 . Chro.50180 338 EYISGGK|VN 0.056 . Chro.50180 350 ISNDINK|EM 0.082 . Chro.50180 371 VSSVNSK|NL 0.081 . Chro.50180 385 SSIYYWK|KL 0.069 . Chro.50180 386 SIYYWKK|LL 0.102 . Chro.50180 389 YWKKLLK|SM 0.082 . Chro.50180 399 GTENDTK|LN 0.062 . Chro.50180 410 EYFIMTK|DI 0.077 . Chro.50180 421 HLNMDIK|TS 0.069 . Chro.50180 427 KTSEQNK|IL 0.067 . Chro.50180 437 LIAQLLK|KR 0.053 . Chro.50180 438 IAQLLKK|RN 0.081 . Chro.50180 439 AQLLKKR|NY 0.108 . Chro.50180 445 RNYLNLK|PP 0.062 . Chro.50180 453 PFNMEEK|IN 0.061 . Chro.50180 465 MAIACSR|LK 0.101 . Chro.50180 467 IACSRLK|ED 0.058 . Chro.50180 470 SRLKEDK|IH 0.068 . Chro.50180 481 CDLEGDK|YT 0.065 . Chro.50180 498 SMNQFWK|IE 0.077 . Chro.50180 509 ITNSLLR|EE 0.093 . Chro.50180 519 AELNLSR|NE 0.070 . Chro.50180 541 NTGVYIK|HR 0.060 . Chro.50180 543 GVYIKHR|SF 0.203 . Chro.50180 547 KHRSFLK|AE 0.061 . Chro.50180 555 EFIPINK|YS 0.055 . Chro.50180 562 YSLTPIK|SK 0.081 . Chro.50180 564 LTPIKSK|LH 0.059 . Chro.50180 575 SHSDFLR|YK 0.155 . Chro.50180 577 SDFLRYK|EE 0.062 . Chro.50180 580 LRYKEEK|IM 0.070 . Chro.50180 583 KEEKIMR|RV 0.098 . Chro.50180 584 EEKIMRR|VP 0.083 . Chro.50180 589 RRVPLVK|KI 0.066 . Chro.50180 590 RVPLVKK|IY 0.087 . Chro.50180 626 NDHTNTK|GS 0.069 . Chro.50180 630 NTKGSLK|KP 0.063 . Chro.50180 631 TKGSLKK|PN 0.158 . Chro.50180 646 HLIGFIK|FI 0.078 . Chro.50180 653 FIPLIGK|EV 0.064 . Chro.50180 665 PIYTIDK|LQ 0.050 . Chro.50180 676 TCSFDNR|TI 0.099 . Chro.50180 682 RTIITDK|YL 0.075 . Chro.50180 687 DKYLWAR|IF 0.111 . Chro.50180 694 IFSEANR|KF 0.107 . Chro.50180 695 FSEANRK|FS 0.074 . Chro.50180 709 WTELHGK|KI 0.064 . Chro.50180 710 TELHGKK|II 0.110 . Chro.50180 718 ILTIPSR|IL 0.079 . Chro.50180 722 PSRILYR|IN 0.096 . Chro.50180 737 LLEFWDK|VI 0.068 . Chro.50180 750 ELYFNYK|WT 0.064 . Chro.50180 753 FNYKWTK|ER 0.062 . Chro.50180 755 YKWTKER|IV 0.170 . Chro.50180 771 GYMHSGK|FL 0.071 . ____________________________^_________________

  • Fasta :-

    >Chro.50180 ATGGAAATATCTCCCAAGGTGTGGTTTTTGATACCGAGTAATGGATCTGACTACAGTGAA TTTAATGTTTGCATTCCAAATAAGAAGTATCATACTACACTTACAAAAAGTCACTTTAAA ATATATACGTGCAAAAATGTAGATTTTATTCGGAATTTAAAATTGTGCAGATTAAATTTG GAATTAGAGGAACTTGTGAGTTTTTCCGAAGATAATTCACAATGGGAAGAGACTAACAAT TTTGAGATTATTATTAATGATTATATGCAATATAGCATAATTTTGAGCATATATATAAAT AATACATACAATAGTAACCAATTATTTATGCTTCGTTTAAAAAGCGATGACCATCATATC ATTAGTATTGATGAATCTCAGAATGAATTTATTAACTTTAGTTTAAGAAGTCGCTTAATT GAGATTAATACATGTTTAATAAGAGATTACCTTTTAAAAGGGTTGAATAAAATAGAAATA AATGGGACACCTGGACAAATACATTGCTTTGGGGAAAAAACTTTTGGACTATTTTGGGGG AAAAATCACAACAGGGGTAGCTTTGGCTGGTGCTCTGGAATAACTTTATATGGAGAAGGG GCGATTTTATCGTTCTCTCATGAAAGTTTTTTGATTGATAAAAATGGACATCAAATATTA AATATTATTTTAGAGAACTTCTATAAATTCAAAGGAGAAACAAAAAAAGATAAATGTATT GGGTTTTTAGGATTTTCTAACTCAGAGTCATCAGAATTTATTAATAGTATTAGCAAAAAC AATTTTGATTATTTTAAAGGCTCATTTTTCGAATATGTTGAATTAGAAAGCATTGAAAAA AGCGTTTCTAATAATGAACTAAATATTTTAGTAATTAACGGAAACAAAGAAAAAAAAAAT ACGGTAAACGAGACAAAATTATCTTCAAAAATACTCAAGAATTATATTTGTTCAGGTGGG TTGCTTATTATCGGATTATGCCCCTGGGGATGGGAATATATCAGCGGTGGGAAAGTAAAT TCCAATTCAATTTCGAATGATATTAATAAAGAGATGGGAATGATTTTTACAAACGAATAT TTTTGCAATGAAGTAAGTTCTGTAAACTCCAAAAATCTATCAAATTATTTTTCAAGCTCA ATTTACTATTGGAAAAAGTTATTGAAGTCAATGAATGGCACAGAAAACGACACTAAATTA AATCTTGATGAGTATTTTATTATGACAAAAGATATTGAATGTCACCTAAATATGGATATA AAAACAAGCGAGCAAAATAAAATTCTTAATTTAATAGCTCAACTACTAAAAAAAAGGAAC TATTTGAATTTGAAACCTCCTTTCAATATGGAAGAAAAAATTAATATCTTGTATATGGCA ATTGCTTGTTCAAGGTTAAAAGAAGATAAAATTCATGAAATTTGTGATTTAGAAGGTGAT AAGTACACTTTCGATGATTTTGATGATTGGATCAGTATGAATCAATTTTGGAAAATAGAA AGTAATATAACAAATTCTTTGTTGAGAGAAGAGCATGCGGAATTAAATTTATCAAGAAAT GAATTACATTGCCCAGTTTATGATATTCCATTTGAGTGGCAAAATACTGGAGTTTACATT AAACACAGAAGTTTTTTAAAAGCTGAATTTATTCCCATAAACAAATATTCTTTAACGCCA ATTAAATCAAAGTTACATGTTGGCAGTCACAGTGATTTTCTCAGATATAAAGAAGAAAAA ATAATGAGAAGGGTTCCGTTAGTAAAAAAAATTTATAATTGGAGTATCTCTGAGACAAAT AATATAACTATCGAGTCCCCATGCGAAGGAATTGTGTATTTCGAATATATTCCAAATAAT GACCATACAAATACAAAAGGATCATTAAAAAAGCCAAACAGTAATGAACCACATGGGCAT TTAATAGGATTTATTAAGTTCATACCATTAATTGGAAAAGAAGTGATAACAACTCCCATT TATACAATTGATAAGTTGCAGCTTGATACTTGCTCATTTGATAATAGAACAATAATTACG GATAAATATTTATGGGCAAGAATTTTTTCAGAGGCAAACAGAAAGTTCTCTAATTTATTA CCTGCTTGGACCGAACTGCATGGAAAGAAAATAATCCTTACGATCCCAAGCAGAATTTTG TATAGGATAAACTGCTTAATTGTTGATGATTTACTTGAGTTTTGGGATAAAGTTATTGAT ACTCAAAATGAGCTTTACTTTAATTATAAATGGACTAAGGAAAGAATTGTTTGTGATATA CAAATTTCAGATGGATATATGCATAGTGGTAAGTTTCTATTTTTTTTTGATTAA
  • Download Fasta

  • Fasta :-

    MEISPKVWFLIPSNGSDYSEFNVCIPNKKYHTTLTKSHFKIYTCKNVDFIRNLKLCRLNL ELEELVSFSEDNSQWEETNNFEIIINDYMQYSIILSIYINNTYNSNQLFMLRLKSDDHHI ISIDESQNEFINFSLRSRLIEINTCLIRDYLLKGLNKIEINGTPGQIHCFGEKTFGLFWG KNHNRGSFGWCSGITLYGEGAILSFSHESFLIDKNGHQILNIILENFYKFKGETKKDKCI GFLGFSNSESSEFINSISKNNFDYFKGSFFEYVELESIEKSVSNNELNILVINGNKEKKN TVNETKLSSKILKNYICSGGLLIIGLCPWGWEYISGGKVNSNSISNDINKEMGMIFTNEY FCNEVSSVNSKNLSNYFSSSIYYWKKLLKSMNGTENDTKLNLDEYFIMTKDIECHLNMDI KTSEQNKILNLIAQLLKKRNYLNLKPPFNMEEKINILYMAIACSRLKEDKIHEICDLEGD KYTFDDFDDWISMNQFWKIESNITNSLLREEHAELNLSRNELHCPVYDIPFEWQNTGVYI KHRSFLKAEFIPINKYSLTPIKSKLHVGSHSDFLRYKEEKIMRRVPLVKKIYNWSISETN NITIESPCEGIVYFEYIPNNDHTNTKGSLKKPNSNEPHGHLIGFIKFIPLIGKEVITTPI YTIDKLQLDTCSFDNRTIITDKYLWARIFSEANRKFSNLLPAWTELHGKKIILTIPSRIL YRINCLIVDDLLEFWDKVIDTQNELYFNYKWTKERIVCDIQISDGYMHSGKFLFFFD

    No Results
    No Results
No Results
No Results
No Results

Chro.50180      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India