Chro.50181 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
Chro.50181OTHER0.9998950.0000260.000078
No Results

  • Fasta :-

    >Chro.50181 MYSYYKLHPKLYPFNISYIKDQINLAVEYLIDMSSESKSPENMERDFREKWMANHGIAFC NYLILINLFGWNTLKTVFQVYDQLSEVDEELVQTHNNQQKMAMWIIIFSSVVGFNLKYFF TQWGWWFCIERATSEIDIQSLCVRIQNHLINIKGICVKNKVSKDEIELGYEDLAVINGWK IWKLDSLEILLNIQC
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/357 Sequence name : 357 Sequence length : 195 VALUES OF COMPUTED PARAMETERS Coef20 : 3.224 CoefTot : -1.535 ChDiff : -5 ZoneTo : 20 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.388 1.565 0.068 0.659 MesoH : -0.205 0.396 -0.400 0.303 MuHd_075 : 22.309 10.938 6.021 3.044 MuHd_095 : 13.832 13.449 4.058 4.432 MuHd_100 : 17.360 10.814 4.799 4.942 MuHd_105 : 15.172 9.520 3.946 3.935 Hmax_075 : 10.733 7.900 1.858 4.083 Hmax_095 : 5.950 7.000 -0.206 3.815 Hmax_100 : 3.700 3.600 -1.206 2.960 Hmax_105 : 9.917 8.900 0.912 4.363 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9342 0.0658 DFMC : 0.9171 0.0829
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 195 Chro.50181 MYSYYKLHPKLYPFNISYIKDQINLAVEYLIDMSSESKSPENMERDFREKWMANHGIAFCNYLILINLFGWNTLKTVFQV 80 YDQLSEVDEELVQTHNNQQKMAMWIIIFSSVVGFNLKYFFTQWGWWFCIERATSEIDIQSLCVRIQNHLINIKGICVKNK 160 VSKDEIELGYEDLAVINGWKIWKLDSLEILLNIQC 240 ................................................................................ 80 ................................................................................ 160 ................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50181 6 -MYSYYK|LH 0.052 . Chro.50181 10 YYKLHPK|LY 0.060 . Chro.50181 20 FNISYIK|DQ 0.058 . Chro.50181 38 DMSSESK|SP 0.089 . Chro.50181 45 SPENMER|DF 0.130 . Chro.50181 48 NMERDFR|EK 0.232 . Chro.50181 50 ERDFREK|WM 0.067 . Chro.50181 75 FGWNTLK|TV 0.083 . Chro.50181 100 THNNQQK|MA 0.103 . Chro.50181 117 VVGFNLK|YF 0.066 . Chro.50181 131 WWFCIER|AT 0.111 . Chro.50181 144 IQSLCVR|IQ 0.093 . Chro.50181 153 NHLINIK|GI 0.065 . Chro.50181 158 IKGICVK|NK 0.060 . Chro.50181 160 GICVKNK|VS 0.075 . Chro.50181 163 VKNKVSK|DE 0.078 . Chro.50181 180 AVINGWK|IW 0.052 . Chro.50181 183 NGWKIWK|LD 0.058 . ____________________________^_________________

  • Fasta :-

    >Chro.50181 ATGTATTCATATTATAAATTACATCCCAAATTGTATCCTTTTAACATTAGCTATATCAAA GATCAAATTAATCTTGCAGTAGAATACCTAATTGATATGAGTTCCGAAAGTAAATCTCCA GAAAACATGGAACGGGACTTCAGAGAAAAATGGATGGCAAACCATGGGATTGCATTCTGT AATTATTTGATTTTAATTAATTTATTTGGATGGAACACATTGAAGACAGTTTTCCAAGTA TATGATCAGCTTTCAGAAGTTGATGAAGAATTAGTTCAAACACATAACAATCAACAAAAG ATGGCTATGTGGATAATTATCTTTTCTTCAGTAGTCGGATTCAATTTAAAGTACTTTTTT ACACAATGGGGATGGTGGTTTTGCATTGAGCGCGCGACATCAGAAATTGACATCCAGTCA TTGTGTGTAAGAATACAAAATCATTTAATAAATATAAAAGGAATTTGTGTGAAGAATAAG GTCTCAAAGGACGAAATTGAGCTTGGGTACGAAGATTTAGCTGTTATAAACGGTTGGAAA ATCTGGAAGCTTGATTCACTTGAAATATTACTAAATATTCAATGTTAG
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  • Fasta :-

    MYSYYKLHPKLYPFNISYIKDQINLAVEYLIDMSSESKSPENMERDFREKWMANHGIAFC NYLILINLFGWNTLKTVFQVYDQLSEVDEELVQTHNNQQKMAMWIIIFSSVVGFNLKYFF TQWGWWFCIERATSEIDIQSLCVRIQNHLINIKGICVKNKVSKDEIELGYEDLAVINGWK IWKLDSLEILLNIQC

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.50181134 SERATSEIDI0.998unspChro.50181134 SERATSEIDI0.998unspChro.50181134 SERATSEIDI0.998unspChro.5018139 SSESKSPENM0.998unspChro.5018185 SYDQLSEVDE0.994unsp

Chro.50181      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India