Chro.50218 | CG1349 gene product

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_IDPredictionOTHERSPmTPCS_Position
Chro.50218OTHER0.9991210.0007880.000091
No Results

  • Fasta :-

    >Chro.50218 MAKKVLVALANGFEEIEFVTPVDILRRADLNVTIAVSGDCKKVMGAHGITIMGDKLLDEV LSEDYDLVMCPGGMDCAIKLGSDQNLLKILRETKKKGGIIASICASPVIVFEKNGLLSDV EKAVSYPSMMNELDKPDSSNAAVCVSSNVVTSQGPGTSVLFGLKLVEMLCGVEKSKLIAD TIVAA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/100 Sequence name : 100 Sequence length : 185 VALUES OF COMPUTED PARAMETERS Coef20 : 3.918 CoefTot : 0.057 ChDiff : -5 ZoneTo : 13 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.465 0.134 0.530 MesoH : -0.273 0.486 -0.262 0.236 MuHd_075 : 11.222 6.729 3.722 2.236 MuHd_095 : 29.999 20.245 8.800 6.394 MuHd_100 : 33.249 21.811 10.364 6.675 MuHd_105 : 31.207 20.230 10.098 6.158 Hmax_075 : 1.313 7.700 -1.358 3.343 Hmax_095 : 10.325 16.887 1.160 5.617 Hmax_100 : 18.200 20.500 3.792 7.000 Hmax_105 : 17.600 20.650 3.926 7.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9031 0.0969 DFMC : 0.9296 0.0704
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 185 Chro.50218 MAKKVLVALANGFEEIEFVTPVDILRRADLNVTIAVSGDCKKVMGAHGITIMGDKLLDEVLSEDYDLVMCPGGMDCAIKL 80 GSDQNLLKILRETKKKGGIIASICASPVIVFEKNGLLSDVEKAVSYPSMMNELDKPDSSNAAVCVSSNVVTSQGPGTSVL 160 FGLKLVEMLCGVEKSKLIADTIVAA 240 ................................................................................ 80 ................................................................................ 160 ......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50218 3 ----MAK|KV 0.080 . Chro.50218 4 ---MAKK|VL 0.089 . Chro.50218 26 TPVDILR|RA 0.088 . Chro.50218 27 PVDILRR|AD 0.097 . Chro.50218 41 AVSGDCK|KV 0.081 . Chro.50218 42 VSGDCKK|VM 0.120 . Chro.50218 55 ITIMGDK|LL 0.067 . Chro.50218 79 GMDCAIK|LG 0.063 . Chro.50218 88 SDQNLLK|IL 0.062 . Chro.50218 91 NLLKILR|ET 0.081 . Chro.50218 94 KILRETK|KK 0.141 . Chro.50218 95 ILRETKK|KG 0.108 . Chro.50218 96 LRETKKK|GG 0.110 . Chro.50218 113 PVIVFEK|NG 0.056 . Chro.50218 122 LLSDVEK|AV 0.093 . Chro.50218 135 MMNELDK|PD 0.068 . Chro.50218 164 SVLFGLK|LV 0.062 . Chro.50218 174 MLCGVEK|SK 0.076 . Chro.50218 176 CGVEKSK|LI 0.065 . ____________________________^_________________

  • Fasta :-

    >Chro.50218 ATGGCAAAAAAGGTTTTAGTTGCTCTCGCAAATGGATTCGAAGAAATTGAATTCGTAACT CCAGTTGATATTCTGAGAAGGGCGGACCTGAATGTTACAATAGCAGTTTCAGGAGATTGC AAAAAAGTTATGGGGGCACACGGGATAACTATTATGGGTGACAAGTTGTTGGATGAGGTA TTGTCTGAAGACTACGATTTAGTCATGTGCCCTGGTGGAATGGATTGCGCAATTAAGCTT GGGAGTGATCAAAATTTGTTGAAAATATTGCGTGAAACGAAAAAAAAAGGTGGAATAATA GCTTCTATTTGTGCTTCTCCTGTTATTGTATTTGAGAAAAATGGTCTACTTTCAGATGTT GAAAAAGCAGTTAGTTATCCATCTATGATGAATGAACTTGATAAGCCAGATAGCTCAAAT GCAGCAGTTTGCGTGAGCTCTAATGTGGTAACCTCACAGGGACCAGGAACTTCTGTTTTA TTTGGTTTAAAGCTTGTAGAAATGTTGTGTGGAGTGGAAAAATCGAAGTTAATTGCAGAT ACAATAGTTGCAGCTTGA
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  • Fasta :-

    MAKKVLVALANGFEEIEFVTPVDILRRADLNVTIAVSGDCKKVMGAHGITIMGDKLLDEV LSEDYDLVMCPGGMDCAIKLGSDQNLLKILRETKKKGGIIASICASPVIVFEKNGLLSDV EKAVSYPSMMNELDKPDSSNAAVCVSSNVVTSQGPGTSVLFGLKLVEMLCGVEKSKLIAD TIVAA

  • title: conserved cys residue
  • coordinates: C104
No Results
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No Results

Chro.50218      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India