Chro.50347 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.50347OTHER0.9962390.0033170.000443
No Results

  • Fasta :-

    >Chro.50347 MYDIETIVEYFSNILFKNSKLIMIGISTGAFLTFSYSTNYTRKDIKCENEYFISNNNLIG IICIACVDNIPESYILDFSNEQLNEFNELGYTKINTKIPIVKINHINKVKDDLKLISRNY LESYNIFPTYNFLLENKEKVVNYPILLIHGTDDQSVPFQMSLNLLNLNNNFSNKNNRYLR LLKINNGNHLLSNSKHIKKAQNEISNFVFEIL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/355 Sequence name : 355 Sequence length : 212 VALUES OF COMPUTED PARAMETERS Coef20 : 3.715 CoefTot : -0.157 ChDiff : 0 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.929 1.594 0.284 0.626 MesoH : -0.568 0.346 -0.333 0.227 MuHd_075 : 28.818 11.329 6.710 4.380 MuHd_095 : 32.105 27.232 10.374 7.062 MuHd_100 : 31.039 26.632 9.124 6.912 MuHd_105 : 24.736 23.043 6.735 5.895 Hmax_075 : 5.425 5.483 -1.378 3.127 Hmax_095 : 19.900 21.800 4.021 7.220 Hmax_100 : 13.900 20.800 2.696 6.820 Hmax_105 : 14.875 19.863 2.478 6.527 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8130 0.1870 DFMC : 0.8961 0.1039
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 212 Chro.50347 MYDIETIVEYFSNILFKNSKLIMIGISTGAFLTFSYSTNYTRKDIKCENEYFISNNNLIGIICIACVDNIPESYILDFSN 80 EQLNEFNELGYTKINTKIPIVKINHINKVKDDLKLISRNYLESYNIFPTYNFLLENKEKVVNYPILLIHGTDDQSVPFQM 160 SLNLLNLNNNFSNKNNRYLRLLKINNGNHLLSNSKHIKKAQNEISNFVFEIL 240 ................................................................................ 80 ................................................................................ 160 .................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50347 17 FSNILFK|NS 0.071 . Chro.50347 20 ILFKNSK|LI 0.072 . Chro.50347 42 YSTNYTR|KD 0.087 . Chro.50347 43 STNYTRK|DI 0.128 . Chro.50347 46 YTRKDIK|CE 0.060 . Chro.50347 93 NELGYTK|IN 0.060 . Chro.50347 97 YTKINTK|IP 0.061 . Chro.50347 102 TKIPIVK|IN 0.065 . Chro.50347 108 KINHINK|VK 0.065 . Chro.50347 110 NHINKVK|DD 0.065 . Chro.50347 114 KVKDDLK|LI 0.062 . Chro.50347 118 DLKLISR|NY 0.069 . Chro.50347 137 NFLLENK|EK 0.052 . Chro.50347 139 LLENKEK|VV 0.071 . Chro.50347 174 NNNFSNK|NN 0.068 . Chro.50347 177 FSNKNNR|YL 0.096 . Chro.50347 180 KNNRYLR|LL 0.252 . Chro.50347 183 RYLRLLK|IN 0.083 . Chro.50347 195 HLLSNSK|HI 0.065 . Chro.50347 198 SNSKHIK|KA 0.098 . Chro.50347 199 NSKHIKK|AQ 0.097 . ____________________________^_________________

  • Fasta :-

    >Chro.50347 ATGTATGATATTGAAACAATAGTAGAATATTTTTCTAATATATTATTTAAAAATTCAAAA TTAATAATGATTGGTATAAGTACAGGTGCATTTCTAACATTTTCTTATTCAACTAATTAT ACAAGAAAAGATATAAAATGTGAAAATGAATACTTTATTTCAAATAATAATTTAATTGGT ATAATATGTATTGCATGTGTAGATAATATTCCAGAAAGTTATATATTAGATTTTAGTAAT GAACAATTAAATGAATTTAACGAATTAGGATATACAAAAATTAATACAAAAATACCAATT GTTAAAATTAATCACATAAATAAAGTAAAAGATGATTTAAAATTAATTTCAAGAAATTAT TTGGAATCATACAATATATTTCCAACATATAATTTTCTATTAGAAAATAAAGAAAAAGTG GTTAATTATCCAATATTATTAATACATGGTACTGATGATCAATCGGTACCTTTTCAAATG TCATTAAATTTATTAAATTTAAATAATAATTTTAGTAATAAAAACAACAGATATTTAAGA CTTTTGAAAATTAATAATGGAAATCATTTATTATCTAATTCAAAACATATAAAAAAAGCA CAAAATGAAATTTCAAATTTTGTGTTTGAAATATTATAA
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  • Fasta :-

    MYDIETIVEYFSNILFKNSKLIMIGISTGAFLTFSYSTNYTRKDIKCENEYFISNNNLIG IICIACVDNIPESYILDFSNEQLNEFNELGYTKINTKIPIVKINHINKVKDDLKLISRNY LESYNIFPTYNFLLENKEKVVNYPILLIHGTDDQSVPFQMSLNLLNLNNNFSNKNNRYLR LLKINNGNHLLSNSKHIKKAQNEISNFVFEIL

    No Results
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Chro.50347      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India