Chro.50457 | erythrocyte membrane-associated antigen

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_IDPredictionOTHERSPmTPCS_Position
Chro.50457OTHER0.9963380.0035620.000100
No Results

  • Fasta :-

    >Chro.50457 MSCRGISIWNDILMLYNASRVYFDVNFENQNSSFLYLNNLPKYWDPISIYWSEPKQSGFV YDDALSLFQIYNFEICGSNIMENISSNWLAALDLSSTCLSLPPFLFARLMAWLPLDCPEY SINNDKLELDKLKENYSQNNELLPYSSLCVVKKKPLPVISFWLSQTDSNDNKVEPIKIFL DDYIIHFNNIDYLCVINSTLGTFGKVNYIPYSEGNSYNYFTPYYSSSNTPLILFGSLFLK SYGIVIDNNSRKVGFYPKYKYKGYNSNTIEHSVNSNCAPKKECLLENGFKYDSSINECIP PNCSDWLLYEFNVETNTCELNSIFPLVLTFIIVLFTFFEIHIMYLKQYILDRSSEISNS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/578 Sequence name : 578 Sequence length : 359 VALUES OF COMPUTED PARAMETERS Coef20 : 4.546 CoefTot : -0.025 ChDiff : -12 ZoneTo : 10 KR : 1 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.600 2.559 0.448 0.914 MesoH : -0.055 0.464 -0.241 0.314 MuHd_075 : 3.601 6.484 3.342 0.805 MuHd_095 : 14.036 2.795 0.172 3.120 MuHd_100 : 18.828 8.049 3.039 4.812 MuHd_105 : 24.995 13.594 6.216 6.478 Hmax_075 : 10.383 12.800 2.531 4.060 Hmax_095 : 8.575 8.500 -0.255 4.646 Hmax_100 : 14.600 12.100 1.600 6.090 Hmax_105 : 15.900 12.600 2.357 5.650 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9559 0.0441 DFMC : 0.9562 0.0438
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 359 Chro.50457 MSCRGISIWNDILMLYNASRVYFDVNFENQNSSFLYLNNLPKYWDPISIYWSEPKQSGFVYDDALSLFQIYNFEICGSNI 80 MENISSNWLAALDLSSTCLSLPPFLFARLMAWLPLDCPEYSINNDKLELDKLKENYSQNNELLPYSSLCVVKKKPLPVIS 160 FWLSQTDSNDNKVEPIKIFLDDYIIHFNNIDYLCVINSTLGTFGKVNYIPYSEGNSYNYFTPYYSSSNTPLILFGSLFLK 240 SYGIVIDNNSRKVGFYPKYKYKGYNSNTIEHSVNSNCAPKKECLLENGFKYDSSINECIPPNCSDWLLYEFNVETNTCEL 320 NSIFPLVLTFIIVLFTFFEIHIMYLKQYILDRSSEISNS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.50457 4 ---MSCR|GI 0.126 . Chro.50457 20 MLYNASR|VY 0.097 . Chro.50457 42 YLNNLPK|YW 0.079 . Chro.50457 55 IYWSEPK|QS 0.073 . Chro.50457 108 PPFLFAR|LM 0.085 . Chro.50457 126 YSINNDK|LE 0.061 . Chro.50457 131 DKLELDK|LK 0.055 . Chro.50457 133 LELDKLK|EN 0.063 . Chro.50457 152 SSLCVVK|KK 0.058 . Chro.50457 153 SLCVVKK|KP 0.105 . Chro.50457 154 LCVVKKK|PL 0.113 . Chro.50457 172 TDSNDNK|VE 0.062 . Chro.50457 177 NKVEPIK|IF 0.059 . Chro.50457 205 TLGTFGK|VN 0.062 . Chro.50457 240 FGSLFLK|SY 0.112 . Chro.50457 251 VIDNNSR|KV 0.093 . Chro.50457 252 IDNNSRK|VG 0.073 . Chro.50457 258 KVGFYPK|YK 0.073 . Chro.50457 260 GFYPKYK|YK 0.079 . Chro.50457 262 YPKYKYK|GY 0.075 . Chro.50457 280 NSNCAPK|KE 0.067 . Chro.50457 281 SNCAPKK|EC 0.089 . Chro.50457 290 LLENGFK|YD 0.071 . Chro.50457 346 IHIMYLK|QY 0.057 . Chro.50457 352 KQYILDR|SS 0.145 . ____________________________^_________________

  • Fasta :-

    >Chro.50457 ATGTCATGCAGAGGTATATCTATTTGGAATGATATATTAATGTTATATAACGCATCAAGA GTTTATTTTGATGTAAATTTTGAAAATCAAAATTCATCTTTTCTATATTTAAATAACTTA CCAAAATATTGGGATCCTATTTCAATTTATTGGAGCGAGCCAAAACAATCTGGATTTGTT TATGATGATGCTCTAAGTCTATTTCAAATCTACAATTTTGAGATATGTGGTTCAAACATT ATGGAAAATATTTCTTCAAATTGGCTTGCTGCTTTGGACTTATCATCAACTTGTCTATCT TTACCTCCCTTTTTATTCGCAAGACTAATGGCATGGTTACCTTTGGATTGTCCCGAATAT AGTATTAATAATGATAAACTCGAGCTTGATAAATTAAAAGAAAATTATTCACAAAATAAT GAATTACTTCCATATTCATCTTTATGCGTTGTTAAAAAGAAGCCTCTCCCTGTTATATCT TTTTGGTTAAGTCAAACTGATTCGAATGATAATAAAGTCGAGCCTATAAAGATCTTTTTG GATGATTATATTATTCATTTTAATAATATTGACTATCTATGTGTAATCAATTCAACACTA GGTACTTTTGGAAAAGTTAATTACATACCTTACAGTGAAGGTAATAGTTATAACTACTTC ACTCCTTATTATTCATCCTCTAATACTCCCTTGATACTCTTTGGTTCTCTTTTTCTCAAA TCATATGGCATTGTAATTGATAACAACTCGAGAAAAGTTGGATTTTATCCAAAATATAAA TACAAGGGTTATAATTCTAACACTATTGAACACTCTGTGAATTCAAATTGTGCTCCTAAA AAAGAGTGTCTATTAGAAAATGGATTTAAATATGATTCATCTATTAATGAATGCATCCCC CCGAATTGCTCAGACTGGCTCCTTTACGAATTTAATGTTGAAACTAATACATGTGAACTA AACTCAATATTTCCTCTCGTTCTCACATTTATTATCGTTCTATTTACTTTCTTTGAAATA CATATAATGTACCTAAAACAATATATTCTTGACAGATCTAGTGAAATTTCTAATTCATGA
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  • Fasta :-

    MSCRGISIWNDILMLYNASRVYFDVNFENQNSSFLYLNNLPKYWDPISIYWSEPKQSGFV YDDALSLFQIYNFEICGSNIMENISSNWLAALDLSSTCLSLPPFLFARLMAWLPLDCPEY SINNDKLELDKLKENYSQNNELLPYSSLCVVKKKPLPVISFWLSQTDSNDNKVEPIKIFL DDYIIHFNNIDYLCVINSTLGTFGKVNYIPYSEGNSYNYFTPYYSSSNTPLILFGSLFLK SYGIVIDNNSRKVGFYPKYKYKGYNSNTIEHSVNSNCAPKKECLLENGFKYDSSINECIP PNCSDWLLYEFNVETNTCELNSIFPLVLTFIIVLFTFFEIHIMYLKQYILDRSSEISNS

    No Results
No Results
No Results
IDSitePeptideScoreMethod
Chro.50457354 SLDRSSEISN0.994unsp

Chro.50457      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India