Chro.60119 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.60119OTHER0.9999370.0000510.000011
No Results

  • Fasta :-

    >Chro.60119 MKVEKVPDSTYDMVGGLDEQIKEIKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKT LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSLIFMDEIDSIGSQ RTEGESGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDDALLRPGR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/268 Sequence name : 268 Sequence length : 172 VALUES OF COMPUTED PARAMETERS Coef20 : 2.756 CoefTot : -0.113 ChDiff : -9 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.394 0.788 -0.127 0.445 MesoH : -0.753 0.193 -0.408 0.174 MuHd_075 : 19.352 2.765 4.081 1.836 MuHd_095 : 21.734 17.382 5.680 3.758 MuHd_100 : 32.870 22.665 8.805 5.670 MuHd_105 : 42.205 24.813 11.268 6.991 Hmax_075 : 2.333 6.183 -1.565 2.065 Hmax_095 : -0.087 8.925 -0.787 2.809 Hmax_100 : 15.000 16.000 2.388 5.110 Hmax_105 : 15.867 16.000 2.658 5.110 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9271 0.0729 DFMC : 0.9044 0.0956
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 172 Chro.60119 MKVEKVPDSTYDMVGGLDEQIKEIKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 80 ELVQKYIGEGSRMVRELFVMAREHAPSLIFMDEIDSIGSQRTEGESGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRI 160 DILDDALLRPGR 240 ................................................................................ 80 ................................................................................ 160 ............ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.60119 2 -----MK|VE 0.056 . Chro.60119 5 --MKVEK|VP 0.063 . Chro.60119 22 GLDEQIK|EI 0.071 . Chro.60119 25 EQIKEIK|EV 0.070 . Chro.60119 33 VIELPIK|HP 0.060 . Chro.60119 47 LGIAQPK|GV 0.085 . Chro.60119 59 GPPGTGK|TL 0.059 . Chro.60119 64 GKTLLAR|AV 0.134 . Chro.60119 76 TDCTFIR|VS 0.131 . Chro.60119 85 GSELVQK|YI 0.105 . Chro.60119 92 YIGEGSR|MV 0.115 . Chro.60119 95 EGSRMVR|EL 0.260 . Chro.60119 102 ELFVMAR|EH 0.093 . Chro.60119 121 DSIGSQR|TE 0.114 . Chro.60119 133 GDSEVQR|TM 0.126 . Chro.60119 152 ESTQNIK|II 0.060 . Chro.60119 159 IIMATNR|ID 0.074 . Chro.60119 169 LDDALLR|PG 0.070 . Chro.60119 172 ALLRPGR|-- 0.210 . ____________________________^_________________

  • Fasta :-

    >Chro.60119 ATGAAGGTTGAAAAAGTTCCAGACAGTACATATGATATGGTTGGTGGACTTGATGAACAA ATTAAAGAAATTAAGGAGGTAATAGAACTTCCAATAAAACATCCTGAGATATTTGAAAGT TTGGGAATTGCTCAACCGAAAGGAGTTCTATTATATGGTCCACCAGGTACCGGCAAGACT TTATTAGCAAGAGCTGTTGCTCATCATACAGATTGTACTTTTATTAGAGTATCTGGTTCT GAGCTTGTTCAAAAATATATTGGAGAAGGAAGTAGAATGGTTAGAGAACTATTCGTTATG GCTAGAGAACATGCTCCATCTTTAATTTTTATGGATGAAATTGACTCAATAGGATCACAA AGAACAGAAGGGGAAAGTGGTGATAGCGAAGTACAGAGGACAATGCTTGAACTTTTAAAC CAATTGGATGGTTTTGAGTCAACACAAAATATTAAGATTATTATGGCAACCAATAGAATT GATATATTAGATGATGCTCTTCTTAGACCTGGTCG
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  • Fasta :-

    MKVEKVPDSTYDMVGGLDEQIKEIKEVIELPIKHPEIFESLGIAQPKGVLLYGPPGTGKT LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSLIFMDEIDSIGSQ RTEGESGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDDALLRPGR

  • title: ATP binding site
  • coordinates: P54,P55,G56,T57,G58,K59,T60,L61,D112,N158
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.601199 SKVPDSTYDM0.997unspChro.6011978 SFIRVSGSEL0.996unsp

Chro.60119      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India