Chro.60437 | aspartyl protease precursor

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_IDPredictionOTHERSPmTPCS_Position
Chro.60437SP0.0052300.9946040.000167CS pos: 18-19. AFC-EG. Pr: 0.5125
No Results

  • Fasta :-

    >Chro.60437 MVFQVFFILMMLKISAFCEGLSNKIRSNTRAELGMEAILSNGLFNSNAQKVELKLSLSEG GMKYSEGNYFSRWITKSKYSEAMDSQDLRNYQNSQYFGKIEVGTPPRKFVVIFDTGSSSV WIPSIECKHKGCEPHNKYDPKLSTSYQKLGDGSLETYIQYGTGSCVLKFGKEVINIGKLK IEDQSFGMAIEESTSPFAELPFDGLVGLGFPDKNSKKNNIPTIVENIKERNILPRNLFGV YISRDSSIPGSISFGAADPKYTISGQKITWHRLTGSHYWEIKIKDIKINGVSTNYCFGDC KAAIDTGSSVSTAPSSFMRKITKVIPMEGECNRYLSSPRITYVIEDIHGNEIEMHMDPQD YVIDEGGPSFNAFNYYWGPQEHYCSIGYIPLDIPAPRGPLFVLGNNFIRKYYSIFDRDNL MVGFTLAKHSKYGPMFISLSSNSESVLKMATFGITIILSLLLFIIY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/538 Sequence name : 538 Sequence length : 466 VALUES OF COMPUTED PARAMETERS Coef20 : 4.476 CoefTot : 0.229 ChDiff : 2 ZoneTo : 18 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.535 2.612 0.499 0.898 MesoH : -0.085 0.612 -0.272 0.299 MuHd_075 : 18.135 8.649 2.326 3.650 MuHd_095 : 9.721 8.099 3.172 2.271 MuHd_100 : 5.037 4.315 1.705 1.345 MuHd_105 : 6.293 6.762 3.909 0.660 Hmax_075 : 21.787 22.700 3.863 7.820 Hmax_095 : 22.662 21.262 4.674 7.201 Hmax_100 : 23.300 24.200 4.621 7.130 Hmax_105 : 18.783 24.033 3.946 7.257 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9610 0.0390 DFMC : 0.9277 0.0723
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 466 Chro.60437 MVFQVFFILMMLKISAFCEGLSNKIRSNTRAELGMEAILSNGLFNSNAQKVELKLSLSEGGMKYSEGNYFSRWITKSKYS 80 EAMDSQDLRNYQNSQYFGKIEVGTPPRKFVVIFDTGSSSVWIPSIECKHKGCEPHNKYDPKLSTSYQKLGDGSLETYIQY 160 GTGSCVLKFGKEVINIGKLKIEDQSFGMAIEESTSPFAELPFDGLVGLGFPDKNSKKNNIPTIVENIKERNILPRNLFGV 240 YISRDSSIPGSISFGAADPKYTISGQKITWHRLTGSHYWEIKIKDIKINGVSTNYCFGDCKAAIDTGSSVSTAPSSFMRK 320 ITKVIPMEGECNRYLSSPRITYVIEDIHGNEIEMHMDPQDYVIDEGGPSFNAFNYYWGPQEHYCSIGYIPLDIPAPRGPL 400 FVLGNNFIRKYYSIFDRDNLMVGFTLAKHSKYGPMFISLSSNSESVLKMATFGITIILSLLLFIIY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.60437 13 FILMMLK|IS 0.057 . Chro.60437 24 CEGLSNK|IR 0.059 . Chro.60437 26 GLSNKIR|SN 0.261 . Chro.60437 30 KIRSNTR|AE 0.085 . Chro.60437 50 FNSNAQK|VE 0.057 . Chro.60437 54 AQKVELK|LS 0.062 . Chro.60437 63 LSEGGMK|YS 0.068 . Chro.60437 72 EGNYFSR|WI 0.129 . Chro.60437 76 FSRWITK|SK 0.087 . Chro.60437 78 RWITKSK|YS 0.082 . Chro.60437 89 MDSQDLR|NY 0.097 . Chro.60437 99 NSQYFGK|IE 0.062 . Chro.60437 107 EVGTPPR|KF 0.087 . Chro.60437 108 VGTPPRK|FV 0.091 . Chro.60437 128 IPSIECK|HK 0.100 . Chro.60437 130 SIECKHK|GC 0.080 . Chro.60437 137 GCEPHNK|YD 0.070 . Chro.60437 141 HNKYDPK|LS 0.071 . Chro.60437 148 LSTSYQK|LG 0.067 . Chro.60437 168 TGSCVLK|FG 0.086 . Chro.60437 171 CVLKFGK|EV 0.074 . Chro.60437 178 EVINIGK|LK 0.057 . Chro.60437 180 INIGKLK|IE 0.081 . Chro.60437 213 GLGFPDK|NS 0.059 . Chro.60437 216 FPDKNSK|KN 0.057 . Chro.60437 217 PDKNSKK|NN 0.099 . Chro.60437 228 TIVENIK|ER 0.059 . Chro.60437 230 VENIKER|NI 0.088 . Chro.60437 235 ERNILPR|NL 0.141 . Chro.60437 244 FGVYISR|DS 0.093 . Chro.60437 260 FGAADPK|YT 0.078 . Chro.60437 267 YTISGQK|IT 0.066 . Chro.60437 272 QKITWHR|LT 0.103 . Chro.60437 282 SHYWEIK|IK 0.075 . Chro.60437 284 YWEIKIK|DI 0.089 . Chro.60437 287 IKIKDIK|IN 0.071 . Chro.60437 301 YCFGDCK|AA 0.070 . Chro.60437 319 APSSFMR|KI 0.207 . Chro.60437 320 PSSFMRK|IT 0.113 . Chro.60437 323 FMRKITK|VI 0.065 . Chro.60437 333 MEGECNR|YL 0.104 . Chro.60437 339 RYLSSPR|IT 0.104 . Chro.60437 397 LDIPAPR|GP 0.090 . Chro.60437 409 LGNNFIR|KY 0.093 . Chro.60437 410 GNNFIRK|YY 0.119 . Chro.60437 417 YYSIFDR|DN 0.145 . Chro.60437 428 VGFTLAK|HS 0.062 . Chro.60437 431 TLAKHSK|YG 0.069 . Chro.60437 448 NSESVLK|MA 0.074 . ____________________________^_________________

  • Fasta :-

    >Chro.60437 ATGGTATTTCAAGTGTTTTTTATTTTAATGATGCTGAAAATATCAGCTTTTTGTGAAGGA TTATCAAACAAGATTAGGTCAAATACTAGGGCAGAGTTAGGAATGGAGGCTATACTAAGT AATGGCTTATTTAATTCAAATGCTCAAAAAGTTGAGTTAAAATTAAGTCTATCTGAGGGA GGAATGAAATATTCAGAAGGCAACTATTTTTCAAGGTGGATTACCAAGAGTAAGTATTCA GAGGCAATGGACTCTCAGGATCTTAGAAATTACCAAAATAGTCAATATTTTGGTAAAATT GAGGTGGGAACGCCTCCAAGAAAGTTCGTTGTCATCTTTGATACAGGAAGCTCCAGTGTA TGGATTCCAAGTATTGAATGTAAGCATAAAGGTTGTGAGCCTCACAACAAGTATGATCCA AAGTTGAGTACCTCTTATCAAAAATTGGGGGACGGATCATTGGAGACATATATCCAATAT GGTACGGGTTCTTGTGTGTTGAAGTTTGGTAAAGAAGTCATAAATATTGGAAAGCTGAAG ATAGAAGACCAGTCTTTCGGGATGGCTATTGAGGAAAGTACATCTCCTTTTGCTGAATTA CCATTCGATGGTTTGGTAGGACTTGGATTTCCAGATAAGAACAGTAAAAAAAATAATATC CCAACAATTGTTGAGAATATTAAAGAACGAAACATTTTACCAAGAAATCTTTTTGGAGTC TACATTTCCAGAGATTCAAGTATTCCAGGTTCAATTTCTTTTGGAGCTGCTGATCCTAAG TACACAATAAGTGGTCAAAAAATAACCTGGCATCGACTTACTGGGTCTCATTACTGGGAA ATCAAGATTAAAGATATAAAGATTAATGGGGTTAGCACAAACTATTGCTTCGGGGACTGC AAGGCAGCTATAGATACTGGTTCATCTGTCTCCACAGCCCCAAGTAGTTTTATGAGAAAG ATCACCAAAGTTATACCCATGGAGGGAGAATGTAACAGATATCTATCTTCTCCTAGAATA ACTTATGTGATAGAAGATATTCATGGAAATGAGATAGAAATGCATATGGATCCTCAAGAC TACGTAATTGATGAAGGAGGGCCTTCATTTAATGCTTTTAACTATTATTGGGGCCCGCAA GAACATTATTGTAGCATTGGATATATCCCTCTTGATATTCCAGCTCCTAGAGGTCCACTT TTTGTACTTGGAAATAACTTTATTCGAAAGTACTACTCAATATTTGATAGGGATAACCTA ATGGTGGGCTTCACATTGGCAAAACATAGTAAATATGGACCTATGTTCATCTCATTATCA TCCAATTCAGAATCTGTTCTTAAAATGGCTACATTTGGAATAACCATTATCCTCAGCCTG CTACTATTTATTATTTATTAA
  • Download Fasta

  • Fasta :-

    MVFQVFFILMMLKISAFCEGLSNKIRSNTRAELGMEAILSNGLFNSNAQKVELKLSLSEG GMKYSEGNYFSRWITKSKYSEAMDSQDLRNYQNSQYFGKIEVGTPPRKFVVIFDTGSSSV WIPSIECKHKGCEPHNKYDPKLSTSYQKLGDGSLETYIQYGTGSCVLKFGKEVINIGKLK IEDQSFGMAIEESTSPFAELPFDGLVGLGFPDKNSKKNNIPTIVENIKERNILPRNLFGV YISRDSSIPGSISFGAADPKYTISGQKITWHRLTGSHYWEIKIKDIKINGVSTNYCFGDC KAAIDTGSSVSTAPSSFMRKITKVIPMEGECNRYLSSPRITYVIEDIHGNEIEMHMDPQD YVIDEGGPSFNAFNYYWGPQEHYCSIGYIPLDIPAPRGPLFVLGNNFIRKYYSIFDRDNL MVGFTLAKHSKYGPMFISLSSNSESVLKMATFGITIILSLLLFIIY

    No Results
  • title: inhibitor binding site
  • coordinates: D114,G116,S118,Y157,I158,Q159,L205
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.60437246 SISRDSSIPG0.991unspChro.60437247 SSRDSSIPGS0.99unsp

Chro.60437      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India