Chro.60469 | hypothetical protein

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No Results
No Results

  • Fasta :-

    >Chro.60469 MCKSLLNYTDAVRDNLNYYPIDVPLLICHCVHDILTDFEGSESTISYFNKSINEIQQCES TESNIESEFVLWPITCKKMSHILTREIGFQDLIEKILEWVSKKESLHESKCKSLRRAEKN SEPLFISIKNKPFLRQNLNKNIQVSN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/13 Sequence name : 13 Sequence length : 146 VALUES OF COMPUTED PARAMETERS Coef20 : 3.628 CoefTot : -0.048 ChDiff : -2 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.194 1.235 -0.008 0.481 MesoH : -0.975 0.024 -0.478 0.145 MuHd_075 : 26.482 21.309 6.900 6.329 MuHd_095 : 35.326 20.349 8.852 5.558 MuHd_100 : 42.987 25.931 11.775 7.435 MuHd_105 : 42.185 25.550 12.274 7.818 Hmax_075 : 4.900 9.625 0.175 2.879 Hmax_095 : 12.700 10.900 1.515 3.970 Hmax_100 : 14.100 14.200 3.440 4.440 Hmax_105 : 16.567 20.300 5.032 5.413 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6500 0.3500 DFMC : 0.8782 0.1218
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 146 Chro.60469 MCKSLLNYTDAVRDNLNYYPIDVPLLICHCVHDILTDFEGSESTISYFNKSINEIQQCESTESNIESEFVLWPITCKKMS 80 HILTREIGFQDLIEKILEWVSKKESLHESKCKSLRRAEKNSEPLFISIKNKPFLRQNLNKNIQVSN 160 ................................................................................ 80 .................................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.60469 3 ----MCK|SL 0.079 . Chro.60469 13 NYTDAVR|DN 0.070 . Chro.60469 50 TISYFNK|SI 0.172 . Chro.60469 77 LWPITCK|KM 0.069 . Chro.60469 78 WPITCKK|MS 0.107 . Chro.60469 85 MSHILTR|EI 0.150 . Chro.60469 95 FQDLIEK|IL 0.060 . Chro.60469 102 ILEWVSK|KE 0.069 . Chro.60469 103 LEWVSKK|ES 0.093 . Chro.60469 110 ESLHESK|CK 0.061 . Chro.60469 112 LHESKCK|SL 0.112 . Chro.60469 115 SKCKSLR|RA 0.117 . Chro.60469 116 KCKSLRR|AE 0.158 . Chro.60469 119 SLRRAEK|NS 0.173 . Chro.60469 129 PLFISIK|NK 0.054 . Chro.60469 131 FISIKNK|PF 0.071 . Chro.60469 135 KNKPFLR|QN 0.085 . Chro.60469 140 LRQNLNK|NI 0.083 . ____________________________^_________________

  • Fasta :-

    >Chro.60469 ATGTGTAAAAGTCTTTTGAATTATACTGATGCAGTCAGAGATAATTTAAATTATTATCCA ATTGATGTTCCTCTATTAATATGTCATTGTGTACATGACATATTGACAGACTTTGAAGGA AGTGAAAGTACTATTAGTTATTTTAATAAATCAATCAATGAAATCCAACAATGTGAATCT ACCGAAAGTAATATAGAATCAGAATTTGTATTATGGCCAATTACTTGTAAGAAAATGTCC CATATTCTAACTAGAGAAATAGGATTTCAGGATTTAATTGAAAAAATTTTAGAATGGGTA TCTAAAAAAGAGTCTTTGCACGAAAGCAAGTGTAAAAGTTTGAGAAGAGCGGAAAAAAAT AGCGAGCCGCTTTTCATATCAATAAAAAATAAGCCATTTTTAAGACAAAATCTAAATAAA AACATTCAGGTATCTAATTAA
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  • Fasta :-

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No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.60469113 SSKCKSLRRA0.992unspChro.60469113 SSKCKSLRRA0.992unspChro.60469113 SSKCKSLRRA0.992unspChro.60469101 SLEWVSKKES0.994unspChro.60469105 SSKKESLHES0.994unsp

Chro.60469      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India