Chro.60574 | similar to CGI-67 protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Chro.60574OTHER0.9999700.0000100.000020
No Results

  • Fasta :-

    >Chro.60574 MTDFSEKNLEYRLDSSEHQAQGQGQGQGQGQGQIQNENKIPSGPIIATLCCLSALGLRGK VVSSFSFFPPKLSGLVLRDRDGSEIEFKKEYIRMRFGLEKITLRSVTNIEKRLEDLLVGE RKADIFCTWLESGRSKIPISCISISPVHNEDGTREKIPAFIFSHGNATDIGSMLPWFVNL SLKLNAHVLAYDYRSYGLSKGKPTERGIYADIKAVYEYARDELNFPTDRIFLLGQSIGSA PTIHLARKLRKKLRKNTGTRTTSDKSNIDCNRSGLPLGGIIIQSGIASGLNALLAPDYKK DIPCDVFPNYRNIRKVPFPILILHGTNDQVIHISNSKKLFENAKENKFHPPVTTWWVEGA NHNLPGPNPKKEYYQKIGAFINSVI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/200 Sequence name : 200 Sequence length : 385 VALUES OF COMPUTED PARAMETERS Coef20 : 3.370 CoefTot : 0.000 ChDiff : 13 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.700 1.600 0.472 0.637 MesoH : -0.602 0.217 -0.406 0.192 MuHd_075 : 26.482 14.283 7.141 5.505 MuHd_095 : 32.875 17.956 9.310 3.664 MuHd_100 : 34.639 15.169 9.460 2.575 MuHd_105 : 27.155 8.914 7.163 0.893 Hmax_075 : -2.683 3.383 -3.428 2.240 Hmax_095 : -2.800 2.362 -2.770 0.831 Hmax_100 : -0.900 2.700 -1.688 0.310 Hmax_105 : -7.583 -1.050 -2.994 0.385 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9155 0.0845 DFMC : 0.9189 0.0811
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 385 Chro.60574 MTDFSEKNLEYRLDSSEHQAQGQGQGQGQGQGQIQNENKIPSGPIIATLCCLSALGLRGKVVSSFSFFPPKLSGLVLRDR 80 DGSEIEFKKEYIRMRFGLEKITLRSVTNIEKRLEDLLVGERKADIFCTWLESGRSKIPISCISISPVHNEDGTREKIPAF 160 IFSHGNATDIGSMLPWFVNLSLKLNAHVLAYDYRSYGLSKGKPTERGIYADIKAVYEYARDELNFPTDRIFLLGQSIGSA 240 PTIHLARKLRKKLRKNTGTRTTSDKSNIDCNRSGLPLGGIIIQSGIASGLNALLAPDYKKDIPCDVFPNYRNIRKVPFPI 320 LILHGTNDQVIHISNSKKLFENAKENKFHPPVTTWWVEGANHNLPGPNPKKEYYQKIGAFINSVI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.60574 7 MTDFSEK|NL 0.067 . Chro.60574 12 EKNLEYR|LD 0.092 . Chro.60574 39 QIQNENK|IP 0.066 . Chro.60574 58 LSALGLR|GK 0.075 . Chro.60574 60 ALGLRGK|VV 0.070 . Chro.60574 71 FSFFPPK|LS 0.075 . Chro.60574 78 LSGLVLR|DR 0.166 . Chro.60574 80 GLVLRDR|DG 0.123 . Chro.60574 88 GSEIEFK|KE 0.061 . Chro.60574 89 SEIEFKK|EY 0.106 . Chro.60574 93 FKKEYIR|MR 0.084 . Chro.60574 95 KEYIRMR|FG 0.101 . Chro.60574 100 MRFGLEK|IT 0.070 . Chro.60574 104 LEKITLR|SV 0.192 . Chro.60574 111 SVTNIEK|RL 0.065 . Chro.60574 112 VTNIEKR|LE 0.124 . Chro.60574 121 DLLVGER|KA 0.072 . Chro.60574 122 LLVGERK|AD 0.076 . Chro.60574 134 TWLESGR|SK 0.114 . Chro.60574 136 LESGRSK|IP 0.070 . Chro.60574 154 HNEDGTR|EK 0.084 . Chro.60574 156 EDGTREK|IP 0.062 . Chro.60574 183 FVNLSLK|LN 0.063 . Chro.60574 194 VLAYDYR|SY 0.142 . Chro.60574 200 RSYGLSK|GK 0.068 . Chro.60574 202 YGLSKGK|PT 0.072 . Chro.60574 206 KGKPTER|GI 0.108 . Chro.60574 213 GIYADIK|AV 0.084 . Chro.60574 220 AVYEYAR|DE 0.086 . Chro.60574 229 LNFPTDR|IF 0.075 . Chro.60574 247 PTIHLAR|KL 0.101 . Chro.60574 248 TIHLARK|LR 0.079 . Chro.60574 250 HLARKLR|KK 0.248 . Chro.60574 251 LARKLRK|KL 0.107 . Chro.60574 252 ARKLRKK|LR 0.089 . Chro.60574 254 KLRKKLR|KN 0.128 . Chro.60574 255 LRKKLRK|NT 0.133 . Chro.60574 260 RKNTGTR|TT 0.107 . Chro.60574 265 TRTTSDK|SN 0.106 . Chro.60574 272 SNIDCNR|SG 0.116 . Chro.60574 299 LLAPDYK|KD 0.061 . Chro.60574 300 LAPDYKK|DI 0.092 . Chro.60574 311 DVFPNYR|NI 0.088 . Chro.60574 314 PNYRNIR|KV 0.227 . Chro.60574 315 NYRNIRK|VP 0.079 . Chro.60574 337 IHISNSK|KL 0.058 . Chro.60574 338 HISNSKK|LF 0.134 . Chro.60574 344 KLFENAK|EN 0.063 . Chro.60574 347 ENAKENK|FH 0.076 . Chro.60574 370 LPGPNPK|KE 0.066 . Chro.60574 371 PGPNPKK|EY 0.111 . Chro.60574 376 KKEYYQK|IG 0.062 . ____________________________^_________________

  • Fasta :-

    >Chro.60574 ATGACAGATTTTAGTGAAAAGAATTTGGAGTATAGGTTGGACAGTTCAGAACACCAAGCA CAAGGTCAGGGACAAGGGCAAGGGCAAGGGCAAGGACAAATTCAGAACGAAAATAAGATT CCAAGTGGTCCCATAATAGCAACATTATGTTGCTTGTCGGCTTTGGGTTTAAGAGGAAAA GTGGTATCATCATTCTCATTCTTTCCTCCGAAATTGAGCGGTCTAGTATTGAGAGATCGA GATGGAAGCGAAATAGAGTTTAAGAAGGAGTATATACGCATGAGATTTGGGTTAGAAAAG ATTACCTTAAGATCTGTGACTAATATAGAAAAGAGATTGGAAGATTTGTTAGTTGGAGAG AGAAAGGCTGATATTTTTTGTACTTGGTTGGAAAGTGGTAGATCAAAGATACCTATTTCT TGCATTAGTATATCCCCAGTTCATAATGAAGATGGTACTAGAGAAAAGATTCCAGCATTC ATATTTAGTCATGGAAATGCGACAGATATTGGAAGCATGCTACCTTGGTTTGTAAATTTG AGCTTAAAGTTAAATGCGCATGTTTTAGCTTATGATTATAGATCATATGGTCTTTCCAAA GGAAAACCGACAGAGAGAGGGATTTATGCAGATATTAAAGCAGTTTATGAATATGCAAGA GACGAATTAAATTTTCCAACTGATAGAATTTTTCTGTTAGGACAAAGTATAGGTTCAGCT CCAACAATACACCTTGCTAGAAAACTTAGGAAGAAGTTGAGAAAGAATACAGGTACAAGA ACAACTTCTGATAAATCCAATATTGATTGTAATAGGTCTGGGCTCCCTTTAGGAGGAATT ATTATTCAATCTGGAATAGCTTCGGGTTTAAATGCTCTTTTAGCTCCAGATTATAAGAAA GATATACCATGTGATGTATTTCCAAACTATAGGAATATTCGAAAAGTGCCATTTCCAATT CTTATTTTGCATGGAACTAATGACCAAGTTATTCATATTTCAAACTCTAAGAAGTTGTTT GAGAATGCGAAAGAAAATAAATTCCATCCTCCAGTAACTACTTGGTGGGTTGAGGGAGCT AACCATAATCTTCCAGGGCCAAACCCCAAAAAAGAGTACTACCAAAAAATTGGTGCTTTT ATTAACTCTGTAATTTAA
  • Download Fasta

  • Fasta :-

    MTDFSEKNLEYRLDSSEHQAQGQGQGQGQGQGQIQNENKIPSGPIIATLCCLSALGLRGK VVSSFSFFPPKLSGLVLRDRDGSEIEFKKEYIRMRFGLEKITLRSVTNIEKRLEDLLVGE RKADIFCTWLESGRSKIPISCISISPVHNEDGTREKIPAFIFSHGNATDIGSMLPWFVNL SLKLNAHVLAYDYRSYGLSKGKPTERGIYADIKAVYEYARDELNFPTDRIFLLGQSIGSA PTIHLARKLRKKLRKNTGTRTTSDKSNIDCNRSGLPLGGIIIQSGIASGLNALLAPDYKK DIPCDVFPNYRNIRKVPFPILILHGTNDQVIHISNSKKLFENAKENKFHPPVTTWWVEGA NHNLPGPNPKKEYYQKIGAFINSVI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.60574263 STRTTSDKSN0.996unspChro.60574263 STRTTSDKSN0.996unspChro.60574263 STRTTSDKSN0.996unspChro.6057415 SYRLDSSEHQ0.994unspChro.6057483 SDRDGSEIEF0.997unsp

Chro.60574      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India