Chro.80075 | hydrolase, alpha/beta fold family

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_IDPredictionOTHERSPmTPCS_Position
Chro.80075SP0.0111840.9886980.000118CS pos: 23-24. VYG-EE. Pr: 0.9075
No Results

  • Fasta :-

    >Chro.80075 MWLFKYIFAILSFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSRGIVNYQLHKENDDGP ISVCLHCFMGTISDCSSISKNLAKNGYRTLRFDFYGHGLSQYKNFGQYSVDDYVDQTMEL LEKLGLYNITAISEEELHSSSFTPKLHVIGTSLGGFVAMRIAQRFPKHIGKLVLDAPPGL LKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYLPNTKIIVY ENCKHRCSKYCKEQFVEDVIKYFKNELDQELVSMSQYYNSVHDMVHSSEKRSLPSIRGTK TDTLLEPNSISEDTCSTSTSGSQEIAVQLASSTEDNTETGSSMSGSGNFNDDFCKTKN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/895 Sequence name : 895 Sequence length : 418 VALUES OF COMPUTED PARAMETERS Coef20 : 4.437 CoefTot : -0.559 ChDiff : -7 ZoneTo : 23 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.582 1.906 0.257 0.756 MesoH : -0.277 0.344 -0.342 0.260 MuHd_075 : 26.149 15.070 7.171 5.259 MuHd_095 : 23.786 19.385 8.123 6.531 MuHd_100 : 22.355 18.372 7.652 6.044 MuHd_105 : 15.494 16.772 6.349 4.692 Hmax_075 : 21.100 20.213 3.476 7.473 Hmax_095 : 19.425 21.600 4.040 7.752 Hmax_100 : 20.200 26.100 4.951 8.220 Hmax_105 : 21.400 22.100 4.390 7.612 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6644 0.3356 DFMC : 0.8225 0.1775
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 418 Chro.80075 MWLFKYIFAILSFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSRGIVNYQLHKENDDGPISVCLHCFMGTISDCSSISK 80 NLAKNGYRTLRFDFYGHGLSQYKNFGQYSVDDYVDQTMELLEKLGLYNITAISEEELHSSSFTPKLHVIGTSLGGFVAMR 160 IAQRFPKHIGKLVLDAPPGLLKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL 240 TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYLPNTKIIVYENCKHRCSKYCKEQFVEDVI 320 KYFKNELDQELVSMSQYYNSVHDMVHSSEKRSLPSIRGTKTDTLLEPNSISEDTCSTSTSGSQEIAVQLASSTEDNTETG 400 SSMSGSGNFNDDFCKTKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.80075 5 --MWLFK|YI 0.087 . Chro.80075 20 AYVGIFK|VY 0.064 . Chro.80075 27 VYGEEQK|VI 0.059 . Chro.80075 40 YFEEGSK|IQ 0.051 . Chro.80075 45 SKIQLSR|GI 0.130 . Chro.80075 54 VNYQLHK|EN 0.067 . Chro.80075 80 DCSSISK|NL 0.065 . Chro.80075 84 ISKNLAK|NG 0.067 . Chro.80075 88 LAKNGYR|TL 0.077 . Chro.80075 91 NGYRTLR|FD 0.255 . Chro.80075 103 HGLSQYK|NF 0.064 . Chro.80075 123 TMELLEK|LG 0.055 . Chro.80075 145 SSSFTPK|LH 0.074 . Chro.80075 160 GGFVAMR|IA 0.099 . Chro.80075 164 AMRIAQR|FP 0.108 . Chro.80075 167 IAQRFPK|HI 0.276 . Chro.80075 171 FPKHIGK|LV 0.088 . Chro.80075 182 APPGLLK|KK 0.053 . Chro.80075 183 PPGLLKK|KV 0.137 . Chro.80075 184 PGLLKKK|VA 0.095 . Chro.80075 226 ENLSSPK|LD 0.064 . Chro.80075 230 SPKLDFR|AK 0.095 . Chro.80075 232 KLDFRAK|HY 0.076 . Chro.80075 236 RAKHYCK|QI 0.060 . Chro.80075 263 IYQEFSK|VD 0.058 . Chro.80075 277 FWGAEDR|LC 0.065 . Chro.80075 296 EYLPNTK|II 0.053 . Chro.80075 304 IVYENCK|HR 0.057 . Chro.80075 306 YENCKHR|CS 0.104 . Chro.80075 309 CKHRCSK|YC 0.201 . Chro.80075 312 RCSKYCK|EQ 0.074 . Chro.80075 321 FVEDVIK|YF 0.075 . Chro.80075 324 DVIKYFK|NE 0.057 . Chro.80075 350 MVHSSEK|RS 0.066 . Chro.80075 351 VHSSEKR|SL 0.352 . Chro.80075 357 RSLPSIR|GT 0.104 . Chro.80075 360 PSIRGTK|TD 0.101 . Chro.80075 415 FNDDFCK|TK 0.060 . Chro.80075 417 DDFCKTK|N- 0.066 . ____________________________^_________________

  • Fasta :-

    >Chro.80075 ATGTGGTTATTTAAATATATATTTGCAATCTTAAGTTTTGCTTATGTAGGTATCTTCAAA GTTTATGGAGAAGAGCAAAAGGTCATTCCTGACCACTTTTACTTTGAAGAAGGTTCTAAA ATCCAATTATCACGTGGAATAGTTAATTATCAATTACATAAAGAAAATGATGATGGACCT ATTTCTGTATGTCTTCATTGTTTTATGGGTACAATTTCAGATTGTTCAAGTATTTCAAAG AATTTAGCTAAGAATGGTTATAGAACTTTAAGATTTGATTTTTATGGGCATGGTTTGTCT CAATATAAAAATTTTGGGCAATATTCTGTGGATGATTATGTTGACCAAACAATGGAATTA CTTGAGAAATTGGGTCTTTACAATATAACTGCTATTTCTGAAGAAGAGTTACATTCAAGC AGTTTCACACCAAAGTTGCATGTAATAGGTACATCTTTGGGTGGATTTGTAGCAATGAGA ATTGCTCAGAGATTTCCAAAACATATTGGCAAATTGGTTTTAGATGCTCCTCCTGGTTTA TTAAAGAAGAAAGTTGCGCCTTATTTACAATATTCAATCATTAACTATCCATTACAACTT TTTGCCAATATATACTCACCAGTTTGGGGTTGTTATCAATTTATGGATCCTCCATCCGAG AATCTTTCTTCTCCAAAGCTTGATTTTAGAGCAAAGCACTATTGTAAACAAATACTTTTA ACATCTCTACAACTATTTTTGGGAATTAATTTATGGAATAATCAACAAATTTATCAAGAA TTTAGTAAAGTCGATGTACCAACTCTTTTTTTCTGGGGAGCTGAAGATAGATTATGTCCA CTTTCTTCAGCAATTACTATTCTAAATGAATATTTACCAAACACAAAGATTATTGTTTAT GAGAATTGTAAGCATAGATGCTCTAAATATTGTAAAGAACAATTTGTTGAAGATGTTATT AAATACTTTAAGAATGAATTAGATCAAGAACTTGTCTCAATGTCACAATATTACAATTCA GTACATGATATGGTTCATTCTTCAGAAAAGAGATCACTTCCATCAATTAGAGGTACCAAA ACGGATACTTTATTAGAGCCTAACTCAATATCTGAAGATACATGTTCAACAAGTACATCT GGTAGTCAAGAGATTGCAGTTCAGTTAGCATCCTCAACTGAAGATAATACCGAGACTGGG AGTTCTATGAGTGGTTCGGGAAATTTTAATGATGATTTTTGTAAAACTAAGAATTAG
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  • Fasta :-

    MWLFKYIFAILSFAYVGIFKVYGEEQKVIPDHFYFEEGSKIQLSRGIVNYQLHKENDDGP ISVCLHCFMGTISDCSSISKNLAKNGYRTLRFDFYGHGLSQYKNFGQYSVDDYVDQTMEL LEKLGLYNITAISEEELHSSSFTPKLHVIGTSLGGFVAMRIAQRFPKHIGKLVLDAPPGL LKKKVAPYLQYSIINYPLQLFANIYSPVWGCYQFMDPPSENLSSPKLDFRAKHYCKQILL TSLQLFLGINLWNNQQIYQEFSKVDVPTLFFWGAEDRLCPLSSAITILNEYLPNTKIIVY ENCKHRCSKYCKEQFVEDVIKYFKNELDQELVSMSQYYNSVHDMVHSSEKRSLPSIRGTK TDTLLEPNSISEDTCSTSTSGSQEIAVQLASSTEDNTETGSSMSGSGNFNDDFCKTKN

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
Chro.80075T3930.5180.062Chro.80075T3790.5010.077
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
Chro.80075T3930.5180.062Chro.80075T3790.5010.077
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Chro.80075355 SRSLPSIRGT0.993unspChro.80075392 SQLASSTEDN0.997unsp

Chro.80075      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India