Chro.80372 | ubiquitin carboxy-terminal hydrolase L1

_IDPredictionOTHERSPmTPCS_Position
Chro.80372OTHER0.9923060.0039240.003770
No Results

  • Fasta :-

    >Chro.80372 MNYYFYIIISAEMKNFPKFSASCEKFRFMNKKNKIWKPLISDPKLLEEYSVGLGVKSKIS FIDIYTTEETEFYFCGINPISLIALVPINDEKICKKRNKLGCEMNISQSVWFMKQYITNS CSAVALLHSILNNDKIELEEESIAKMLLNLKGDPNDLPRERGFYLINDKNIEYLHEKLSS RDLTKDCDKSEFHYVSFVSNHGHIIELDGRLPCQISHGVCKSDEFLKNTLKIIKEHFILP IGINGKIAIVALCIK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/361 Sequence name : 361 Sequence length : 255 VALUES OF COMPUTED PARAMETERS Coef20 : 3.776 CoefTot : -0.352 ChDiff : 2 ZoneTo : 11 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.606 2.065 0.326 0.719 MesoH : -0.704 0.315 -0.395 0.200 MuHd_075 : 9.860 1.564 1.835 1.829 MuHd_095 : 25.022 17.597 6.458 6.067 MuHd_100 : 17.780 12.133 4.039 4.303 MuHd_105 : 13.389 3.998 4.171 2.338 Hmax_075 : 4.433 2.800 -1.940 2.860 Hmax_095 : 10.500 11.900 0.210 5.360 Hmax_100 : 8.200 9.500 -0.864 4.320 Hmax_105 : 9.200 4.200 0.192 3.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9553 0.0447 DFMC : 0.9799 0.0201
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 255 Chro.80372 MNYYFYIIISAEMKNFPKFSASCEKFRFMNKKNKIWKPLISDPKLLEEYSVGLGVKSKISFIDIYTTEETEFYFCGINPI 80 SLIALVPINDEKICKKRNKLGCEMNISQSVWFMKQYITNSCSAVALLHSILNNDKIELEEESIAKMLLNLKGDPNDLPRE 160 RGFYLINDKNIEYLHEKLSSRDLTKDCDKSEFHYVSFVSNHGHIIELDGRLPCQISHGVCKSDEFLKNTLKIIKEHFILP 240 IGINGKIAIVALCIK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Chro.80372 14 IISAEMK|NF 0.061 . Chro.80372 18 EMKNFPK|FS 0.069 . Chro.80372 25 FSASCEK|FR 0.065 . Chro.80372 27 ASCEKFR|FM 0.123 . Chro.80372 31 KFRFMNK|KN 0.059 . Chro.80372 32 FRFMNKK|NK 0.123 . Chro.80372 34 FMNKKNK|IW 0.075 . Chro.80372 37 KKNKIWK|PL 0.072 . Chro.80372 44 PLISDPK|LL 0.062 . Chro.80372 56 SVGLGVK|SK 0.072 . Chro.80372 58 GLGVKSK|IS 0.073 . Chro.80372 92 VPINDEK|IC 0.058 . Chro.80372 95 NDEKICK|KR 0.060 . Chro.80372 96 DEKICKK|RN 0.080 . Chro.80372 97 EKICKKR|NK 0.217 . Chro.80372 99 ICKKRNK|LG 0.065 . Chro.80372 114 QSVWFMK|QY 0.074 . Chro.80372 135 SILNNDK|IE 0.056 . Chro.80372 145 EEESIAK|ML 0.059 . Chro.80372 151 KMLLNLK|GD 0.055 . Chro.80372 159 DPNDLPR|ER 0.100 . Chro.80372 161 NDLPRER|GF 0.077 . Chro.80372 169 FYLINDK|NI 0.055 . Chro.80372 177 IEYLHEK|LS 0.064 . Chro.80372 181 HEKLSSR|DL 0.103 . Chro.80372 185 SSRDLTK|DC 0.118 . Chro.80372 189 LTKDCDK|SE 0.071 . Chro.80372 210 IIELDGR|LP 0.078 . Chro.80372 221 ISHGVCK|SD 0.104 . Chro.80372 227 KSDEFLK|NT 0.067 . Chro.80372 231 FLKNTLK|II 0.058 . Chro.80372 234 NTLKIIK|EH 0.059 . Chro.80372 246 PIGINGK|IA 0.071 . Chro.80372 255 IVALCIK|-- 0.061 . ____________________________^_________________

  • Fasta :-

    >Chro.80372 ATGAACTATTATTTTTATATTATCATTTCTGCTGAAATGAAAAATTTTCCAAAGTTTTCC GCCAGCTGTGAAAAATTCAGATTTATGAATAAAAAAAACAAAATATGGAAACCTCTTATT TCTGATCCAAAATTACTTGAAGAGTATTCCGTTGGATTAGGTGTTAAATCTAAAATTAGC TTTATTGATATTTACACAACAGAAGAGACCGAATTTTATTTTTGTGGTATAAATCCAATT TCTTTAATAGCTTTAGTACCAATTAATGATGAAAAAATTTGCAAAAAGAGAAATAAATTA GGATGCGAAATGAATATCTCCCAGAGTGTTTGGTTCATGAAACAATACATTACGAATTCT TGCAGTGCAGTTGCGCTTTTACATTCAATTTTGAATAATGATAAAATAGAACTTGAAGAA GAAAGCATCGCCAAGATGTTATTGAATTTAAAAGGTGATCCAAATGATCTACCCAGAGAA AGAGGGTTTTATTTAATAAATGACAAGAATATTGAGTATCTACACGAAAAATTATCATCA AGAGATCTAACTAAAGACTGTGATAAATCAGAGTTCCATTATGTATCTTTTGTAAGTAAT CATGGGCATATAATAGAATTAGATGGAAGGCTTCCCTGTCAAATTAGCCACGGAGTATGC AAAAGTGATGAATTTCTTAAAAACACACTAAAAATCATAAAAGAACATTTTATTTTGCCA ATAGGAATAAATGGCAAAATAGCTATTGTTGCATTGTGTATAAAATAG
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  • Fasta :-

    MNYYFYIIISAEMKNFPKFSASCEKFRFMNKKNKIWKPLISDPKLLEEYSVGLGVKSKIS FIDIYTTEETEFYFCGINPISLIALVPINDEKICKKRNKLGCEMNISQSVWFMKQYITNS CSAVALLHSILNNDKIELEEESIAKMLLNLKGDPNDLPRERGFYLINDKNIEYLHEKLSS RDLTKDCDKSEFHYVSFVSNHGHIIELDGRLPCQISHGVCKSDEFLKNTLKIIKEHFILP IGINGKIAIVALCIK

  • title: catalytic site
  • coordinates: Q115,C121,H193,D208
No Results
No Results
IDSitePeptideScoreMethod
Chro.80372179 SHEKLSSRDL0.992unsp

Chro.80372      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India