EDI_002840 | cysteine proteinase 2 precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_002840SP0.0072080.9927790.000014CS pos: 14-15. INA-IS. Pr: 0.7711
No Results

  • Fasta :-

    >EDI_002840 MFLFLVFLLCEINAISFKEWISVHKKSFSPIEYLRRRAVFIENTKYVNEMNKQNLGFTLS NEGPFAVLTREESIAVTQGFRMDKSDLEQHKTLKREMTEAIDYRNIQGKNYMTPVKDQEN CGSCYAFSSVALMETAVLLAYDDLSPNTYALSTAEIVSCCYDPNGCRGCEGGSIGSALKY AQDNGMQTESSFPYKPFEQRCLQGEKVMKVKKYTHSDTKGDDEKVRSEILSYGPVGSSMD ASRSSFLLYHGGIYNDKKCRSDKPTIAVVIIGYGIDKSNNKYFIVRNNWGQYWGEQGYFR ISSDNNLCGLSNDIYYIESIERLK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_002840.fa Sequence name : EDI_002840 Sequence length : 324 VALUES OF COMPUTED PARAMETERS Coef20 : 4.514 CoefTot : 0.488 ChDiff : -1 ZoneTo : 10 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 2.235 0.266 0.762 MesoH : -0.411 0.145 -0.209 0.167 MuHd_075 : 7.372 4.093 3.931 1.755 MuHd_095 : 15.101 5.964 2.893 2.294 MuHd_100 : 14.755 7.578 3.963 2.386 MuHd_105 : 10.647 7.589 4.211 1.876 Hmax_075 : 20.400 22.400 5.503 7.020 Hmax_095 : 19.500 20.500 3.632 6.660 Hmax_100 : 19.500 21.500 3.828 6.660 Hmax_105 : 21.700 25.100 4.640 7.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9986 0.0014 DFMC : 0.9977 0.0023
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 324 EDI_002840 MFLFLVFLLCEINAISFKEWISVHKKSFSPIEYLRRRAVFIENTKYVNEMNKQNLGFTLSNEGPFAVLTREESIAVTQGF 80 RMDKSDLEQHKTLKREMTEAIDYRNIQGKNYMTPVKDQENCGSCYAFSSVALMETAVLLAYDDLSPNTYALSTAEIVSCC 160 YDPNGCRGCEGGSIGSALKYAQDNGMQTESSFPYKPFEQRCLQGEKVMKVKKYTHSDTKGDDEKVRSEILSYGPVGSSMD 240 ASRSSFLLYHGGIYNDKKCRSDKPTIAVVIIGYGIDKSNNKYFIVRNNWGQYWGEQGYFRISSDNNLCGLSNDIYYIESI 320 ERLK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_002840 18 INAISFK|EW 0.073 . EDI_002840 25 EWISVHK|KS 0.060 . EDI_002840 26 WISVHKK|SF 0.340 . EDI_002840 35 SPIEYLR|RR 0.072 . EDI_002840 36 PIEYLRR|RA 0.135 . EDI_002840 37 IEYLRRR|AV 0.197 . EDI_002840 45 VFIENTK|YV 0.070 . EDI_002840 52 YVNEMNK|QN 0.059 . EDI_002840 70 PFAVLTR|EE 0.114 . EDI_002840 81 AVTQGFR|MD 0.070 . EDI_002840 84 QGFRMDK|SD 0.173 . EDI_002840 91 SDLEQHK|TL 0.067 . EDI_002840 94 EQHKTLK|RE 0.059 . EDI_002840 95 QHKTLKR|EM 0.146 . EDI_002840 104 TEAIDYR|NI 0.115 . EDI_002840 109 YRNIQGK|NY 0.083 . EDI_002840 116 NYMTPVK|DQ 0.074 . EDI_002840 167 YDPNGCR|GC 0.085 . EDI_002840 179 SIGSALK|YA 0.079 . EDI_002840 195 ESSFPYK|PF 0.089 . EDI_002840 200 YKPFEQR|CL 0.096 . EDI_002840 206 RCLQGEK|VM 0.054 . EDI_002840 209 QGEKVMK|VK 0.058 . EDI_002840 211 EKVMKVK|KY 0.069 . EDI_002840 212 KVMKVKK|YT 0.133 . EDI_002840 219 YTHSDTK|GD 0.070 . EDI_002840 224 TKGDDEK|VR 0.070 . EDI_002840 226 GDDEKVR|SE 0.108 . EDI_002840 243 SSMDASR|SS 0.139 . EDI_002840 257 GGIYNDK|KC 0.060 . EDI_002840 258 GIYNDKK|CR 0.131 . EDI_002840 260 YNDKKCR|SD 0.139 . EDI_002840 263 KKCRSDK|PT 0.187 . EDI_002840 277 IGYGIDK|SN 0.075 . EDI_002840 281 IDKSNNK|YF 0.064 . EDI_002840 286 NKYFIVR|NN 0.096 . EDI_002840 300 GEQGYFR|IS 0.105 . EDI_002840 322 YIESIER|LK 0.070 . EDI_002840 324 ESIERLK|-- 0.061 . ____________________________^_________________

  • Fasta :-

    >EDI_002840 ATGTTTTTGTTCCTCGTATTCCTTTTATGTGAAATAAATGCTATTTCATTTAAAGAATGG ATTAGTGTTCATAAAAAATCATTTAGTCCAATTGAATATTTAAGAAGAAGAGCAGTTTTT ATTGAAAATACAAAATATGTTAATGAAATGAACAAGCAAAATTTAGGATTTACTTTATCT AATGAAGGTCCATTTGCTGTTCTTACTCGTGAAGAGAGTATTGCTGTTACACAAGGATTT CGTATGGATAAATCTGATCTTGAACAACACAAAACTTTGAAAAGAGAAATGACTGAAGCT ATTGATTATAGAAATATTCAAGGAAAAAATTATATGACCCCAGTTAAAGACCAAGAGAAT TGTGGTTCATGTTATGCTTTTAGTTCTGTTGCACTAATGGAAACTGCTGTTTTGTTGGCA TATGATGATCTTAGTCCTAATACTTACGCACTTTCCACTGCTGAAATTGTTTCATGTTGT TATGATCCTAATGGATGTAGAGGGTGTGAAGGAGGGTCTATTGGAAGTGCACTAAAATAT GCACAAGATAATGGAATGCAAACTGAATCAAGTTTCCCCTATAAACCATTTGAACAACGT TGTTTACAAGGTGAAAAAGTTATGAAAGTTAAAAAATATACTCATAGTGATACTAAAGGA GATGATGAAAAAGTCCGTTCTGAGATATTGTCATATGGACCTGTTGGATCATCGATGGAT GCCTCACGTTCATCATTCCTTTTATATCATGGTGGTATTTATAATGATAAAAAATGTCGT TCTGATAAGCCAACAATTGCTGTAGTTATTATTGGATATGGTATTGATAAGAGTAATAAT AAATATTTTATTGTTAGAAATAATTGGGGACAATATTGGGGAGAACAAGGATATTTTAGA ATATCATCAGACAACAATTTATGTGGATTATCTAATGATATCTATTATATAGAGTCTATA GAAAGACTTAAATAA
  • Download Fasta

  • Fasta :-

    MFLFLVFLLCEINAISFKEWISVHKKSFSPIEYLRRRAVFIENTKYVNEMNKQNLGFTLS NEGPFAVLTREESIAVTQGFRMDKSDLEQHKTLKREMTEAIDYRNIQGKNYMTPVKDQEN CGSCYAFSSVALMETAVLLAYDDLSPNTYALSTAEIVSCCYDPNGCRGCEGGSIGSALKY AQDNGMQTESSFPYKPFEQRCLQGEKVMKVKKYTHSDTKGDDEKVRSEILSYGPVGSSMD ASRSSFLLYHGGIYNDKKCRSDKPTIAVVIIGYGIDKSNNKYFIVRNNWGQYWGEQGYFR ISSDNNLCGLSNDIYYIESIERLK

    No Results
  • title: active site
  • coordinates: Q118,C124,I266,N287
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_00284029 SKKSFSPIEY0.993unspEDI_002840261 SKKCRSDKPT0.993unsp

EDI_002840      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India