EDI_011760 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EDI_011760OTHER0.9987570.0001260.001118
No Results

  • Fasta :-

    >EDI_011760 MDPTFPVNQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIDLKKDRFFI PEDSKVSDFVKVLVDKYIETDGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDG YLYFIVYRESVFGY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_011760.fa Sequence name : EDI_011760 Sequence length : 134 VALUES OF COMPUTED PARAMETERS Coef20 : 3.423 CoefTot : -1.551 ChDiff : -3 ZoneTo : 20 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.035 0.706 -0.276 0.336 MesoH : -1.315 -0.175 -0.571 0.101 MuHd_075 : 26.093 7.910 5.557 3.800 MuHd_095 : 7.374 7.859 2.662 2.117 MuHd_100 : 10.497 12.020 3.008 2.144 MuHd_105 : 8.819 12.851 3.201 1.769 Hmax_075 : 7.500 3.200 -0.902 2.540 Hmax_095 : -4.700 0.263 -2.233 1.190 Hmax_100 : 0.900 3.400 -2.112 2.090 Hmax_105 : -0.100 5.000 -3.017 1.710 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9941 0.0059 DFMC : 0.9875 0.0125
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 134 EDI_011760 MDPTFPVNQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIDLKKDRFFIPEDSKVSDFVKVLVDKYIET 80 DGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDGYLYFIVYRESVFGY 160 ................................................................................ 80 ...................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_011760 11 FPVNQPK|LP 0.078 . EDI_011760 15 QPKLPFK|QR 0.063 . EDI_011760 17 KLPFKQR|VS 0.111 . EDI_011760 23 RVSFEER|KA 0.128 . EDI_011760 24 VSFEERK|AF 0.092 . EDI_011760 31 AFAIQLR|QK 0.084 . EDI_011760 33 AIQLRQK|KP 0.060 . EDI_011760 34 IQLRQKK|PN 0.198 . EDI_011760 54 SNAIDLK|KD 0.061 . EDI_011760 55 NAIDLKK|DR 0.116 . EDI_011760 57 IDLKKDR|FF 0.103 . EDI_011760 65 FIPEDSK|VS 0.054 . EDI_011760 71 KVSDFVK|VL 0.067 . EDI_011760 76 VKVLVDK|YI 0.081 . EDI_011760 92 ISTVSVK|IQ 0.065 . EDI_011760 98 KIQTPSK|AI 0.071 . EDI_011760 128 LYFIVYR|ES 0.076 . ____________________________^_________________

  • Fasta :-

    >EDI_011760 ATGGATCCAACTTTTCCAGTAAATCAACCAAAACTCCCTTTTAAACAACGAGTTTCTTTT GAAGAACGTAAGGCATTTGCTATTCAATTAAGACAAAAGAAACCAAATTATGTCCCACTT GTTGTTGAAAGTGATGGAACTTCAAATGCTATTGATTTAAAGAAGGATAGGTTCTTCATT CCTGAAGACTCAAAAGTTAGTGACTTTGTTAAAGTCTTAGTTGATAAATACATTGAAACT GATGGTGAAACTCCAATTTCAACCGTTTCTGTTAAAATTCAAACACCAAGCAAAGCTATT CAACCATCAAATGAAGATACTATTGGATCACTTTATGCTATGTATCAAGAAGAAGATGGG TATCTTTATTTCATTGTTTACAGAGAATCTGTCTTTGGATATTAA
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  • Fasta :-

    MDPTFPVNQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIDLKKDRFFI PEDSKVSDFVKVLVDKYIETDGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDG YLYFIVYRESVFGY

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_011760T950.6390.054EDI_011760T40.5990.273EDI_011760T880.5640.083
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_011760T950.6390.054EDI_011760T40.5990.273EDI_011760T880.5640.083
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_01176019 SKQRVSFEER0.998unspEDI_011760103 SAIQPSNEDT0.996unsp

EDI_011760      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India