EDI_012640 | cysteine proteinase ACP1 precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_012640SP0.0225770.9767380.000686CS pos: 14-15. SFS-QE. Pr: 0.6074
No Results

  • Fasta :-

    >EDI_012640 MNLILLIVLCKSFSQESPTFYGLLPKKSIRPLSSNEIPTRLQKNNTFYPFLLKEIPSSLS YCGTYRKRNPHKIEDYCIKQTMNQGECGGCYAMALAQVLQAHYTHLTLRHQAFSTQQIID CSNNNGCSGGWPTSVLESLQYFVSEIEYPYRLITINGNSTNNYKKECIRGRRTRIHISDY KEVIGSISFEQIKVLLIEHGPFIGMIYSNDQLRKYSGGILHLNCPVVPTLNHAIIVVGYG EENQEKYIIIRNSWGNSWGEMGYARISINDLCGLDGIKYSDYPTILYLKTQLPKQIYSNY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_012640.fa Sequence name : EDI_012640 Sequence length : 300 VALUES OF COMPUTED PARAMETERS Coef20 : 4.339 CoefTot : -2.718 ChDiff : 7 ZoneTo : 73 KR : 11 DE : 3 CleavSite : 40 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.018 1.365 0.135 0.555 MesoH : -0.405 0.309 -0.346 0.262 MuHd_075 : 48.718 27.397 13.003 9.887 MuHd_095 : 31.908 25.181 9.251 6.976 MuHd_100 : 31.832 24.302 9.390 6.892 MuHd_105 : 34.481 21.260 8.790 6.271 Hmax_075 : 10.062 7.700 1.160 2.739 Hmax_095 : 11.900 19.900 2.327 4.305 Hmax_100 : 9.600 13.600 3.401 4.970 Hmax_105 : -1.400 17.383 4.141 1.878 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2981 0.7019 DFMC : 0.4954 0.5046 This protein is probably imported in mitochondria. f(Ser) = 0.1233 f(Arg) = 0.0548 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 300 EDI_012640 MNLILLIVLCKSFSQESPTFYGLLPKKSIRPLSSNEIPTRLQKNNTFYPFLLKEIPSSLSYCGTYRKRNPHKIEDYCIKQ 80 TMNQGECGGCYAMALAQVLQAHYTHLTLRHQAFSTQQIIDCSNNNGCSGGWPTSVLESLQYFVSEIEYPYRLITINGNST 160 NNYKKECIRGRRTRIHISDYKEVIGSISFEQIKVLLIEHGPFIGMIYSNDQLRKYSGGILHLNCPVVPTLNHAIIVVGYG 240 EENQEKYIIIRNSWGNSWGEMGYARISINDLCGLDGIKYSDYPTILYLKTQLPKQIYSNY 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_012640 11 LLIVLCK|SF 0.096 . EDI_012640 26 FYGLLPK|KS 0.057 . EDI_012640 27 YGLLPKK|SI 0.113 . EDI_012640 30 LPKKSIR|PL 0.128 . EDI_012640 40 SNEIPTR|LQ 0.079 . EDI_012640 43 IPTRLQK|NN 0.098 . EDI_012640 53 FYPFLLK|EI 0.056 . EDI_012640 66 SYCGTYR|KR 0.077 . EDI_012640 67 YCGTYRK|RN 0.069 . EDI_012640 68 CGTYRKR|NP 0.183 . EDI_012640 72 RKRNPHK|IE 0.084 . EDI_012640 79 IEDYCIK|QT 0.074 . EDI_012640 109 YTHLTLR|HQ 0.087 . EDI_012640 151 EIEYPYR|LI 0.095 . EDI_012640 164 NSTNNYK|KE 0.058 . EDI_012640 165 STNNYKK|EC 0.139 . EDI_012640 169 YKKECIR|GR 0.088 . EDI_012640 171 KECIRGR|RT 0.098 . EDI_012640 172 ECIRGRR|TR 0.250 . EDI_012640 174 IRGRRTR|IH 0.257 . EDI_012640 181 IHISDYK|EV 0.073 . EDI_012640 193 ISFEQIK|VL 0.059 . EDI_012640 213 YSNDQLR|KY 0.132 . EDI_012640 214 SNDQLRK|YS 0.142 . EDI_012640 246 GEENQEK|YI 0.072 . EDI_012640 251 EKYIIIR|NS 0.082 . EDI_012640 265 GEMGYAR|IS 0.101 . EDI_012640 278 CGLDGIK|YS 0.052 . EDI_012640 289 PTILYLK|TQ 0.052 . EDI_012640 294 LKTQLPK|QI 0.064 . ____________________________^_________________

  • Fasta :-

    >EDI_012640 ATGAATTTAATTTTATTAATTGTTCTTTGTAAGAGTTTTTCACAAGAATCTCCAACATTC TATGGATTACTTCCAAAGAAAAGTATTCGACCTCTTTCATCTAATGAAATACCAACAAGA TTACAAAAAAATAATACATTCTATCCATTTTTATTAAAAGAAATTCCATCTTCATTATCT TATTGTGGTACTTATCGTAAACGAAATCCACATAAAATTGAAGATTATTGTATAAAACAA ACAATGAATCAAGGAGAATGTGGTGGGTGTTATGCAATGGCACTAGCACAAGTTTTACAA GCACATTACACCCATTTAACATTAAGACATCAAGCATTCAGCACACAACAAATCATTGAT TGTTCAAATAACAATGGATGTAGTGGAGGATGGCCTACAAGTGTCTTAGAATCTCTTCAA TATTTTGTTTCAGAAATTGAATATCCATACCGATTGATTACTATCAATGGGAATTCAACA AACAATTACAAAAAAGAGTGTATTAGAGGAAGAAGAACAAGAATACATATTAGTGATTAT AAAGAAGTGATTGGATCAATTAGTTTTGAACAAATAAAAGTTTTACTCATTGAACATGGA CCATTTATTGGAATGATTTATAGTAATGATCAATTACGAAAATATTCAGGTGGGATATTA CATTTAAATTGTCCTGTTGTTCCAACACTTAATCATGCAATCATTGTTGTTGGATATGGA GAAGAAAATCAAGAGAAATATATCATTATTAGAAATTCATGGGGGAATTCATGGGGAGAA ATGGGATATGCTAGGATATCAATTAATGATTTATGTGGATTAGATGGAATAAAATATTCT GATTATCCAACAATTTTATATTTGAAAACACAATTACCAAAGCAAATCTATTCGAATTAT TGA
  • Download Fasta

  • Fasta :-

    MNLILLIVLCKSFSQESPTFYGLLPKKSIRPLSSNEIPTRLQKNNTFYPFLLKEIPSSLS YCGTYRKRNPHKIEDYCIKQTMNQGECGGCYAMALAQVLQAHYTHLTLRHQAFSTQQIID CSNNNGCSGGWPTSVLESLQYFVSEIEYPYRLITINGNSTNNYKKECIRGRRTRIHISDY KEVIGSISFEQIKVLLIEHGPFIGMIYSNDQLRKYSGGILHLNCPVVPTLNHAIIVVGYG EENQEKYIIIRNSWGNSWGEMGYARISINDLCGLDGIKYSDYPTILYLKTQLPKQIYSNY

  • title: active site
  • coordinates: Q84,C90,H232,N252
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_01264033 SIRPLSSNEI0.995unspEDI_012640267 SYARISINDL0.993unsp

EDI_012640      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India