EDI_020730 | proteasome subunit beta type-5 precursor, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_020730OTHER0.9999150.0000400.000045
No Results

  • Fasta :-

    >EDI_020730 MESLIKDLNKQKETKKERLVIPCKELSLPKALSEHKHGTTTLSMIIKEGIIVAVDSRATR GAFISSGSVQKYIPITSHIIGTMAGGAADCAYWERELTRQCRLFELRNKPPISVAAASKM LANILYQYRNYNLSVGSMICGYDKTGPHIFYVEDGGVRIPGHLFSVGSGSPYAVSLIDSE YDYNMPKEKAIELARRAIFHATHRDVASGGNVNVIFIDKDGWRLISRNDCYDLYYDHYNI EEYQKHGQMEED
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_020730.fa Sequence name : EDI_020730 Sequence length : 252 VALUES OF COMPUTED PARAMETERS Coef20 : 3.552 CoefTot : 0.000 ChDiff : 0 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.335 1.341 0.117 0.544 MesoH : -0.334 0.328 -0.294 0.224 MuHd_075 : 30.690 16.582 9.472 4.573 MuHd_095 : 28.719 19.462 7.294 6.166 MuHd_100 : 25.641 18.329 7.126 4.662 MuHd_105 : 22.606 16.448 7.032 3.781 Hmax_075 : -17.150 -4.317 -6.135 -1.552 Hmax_095 : -10.300 2.700 -5.627 0.460 Hmax_100 : -9.600 2.700 -5.453 0.390 Hmax_105 : -15.400 -2.700 -5.567 -1.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8315 0.1685 DFMC : 0.8017 0.1983
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 252 EDI_020730 MESLIKDLNKQKETKKERLVIPCKELSLPKALSEHKHGTTTLSMIIKEGIIVAVDSRATRGAFISSGSVQKYIPITSHII 80 GTMAGGAADCAYWERELTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICGYDKTGPHIFYVEDGGVRIP 160 GHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASGGNVNVIFIDKDGWRLISRNDCYDLYYDHYNI 240 EEYQKHGQMEED 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_020730 6 -MESLIK|DL 0.069 . EDI_020730 10 LIKDLNK|QK 0.071 . EDI_020730 12 KDLNKQK|ET 0.066 . EDI_020730 15 NKQKETK|KE 0.069 . EDI_020730 16 KQKETKK|ER 0.079 . EDI_020730 18 KETKKER|LV 0.114 . EDI_020730 24 RLVIPCK|EL 0.060 . EDI_020730 30 KELSLPK|AL 0.069 . EDI_020730 36 KALSEHK|HG 0.064 . EDI_020730 47 TLSMIIK|EG 0.072 . EDI_020730 57 IVAVDSR|AT 0.102 . EDI_020730 60 VDSRATR|GA 0.407 . EDI_020730 71 SSGSVQK|YI 0.070 . EDI_020730 95 DCAYWER|EL 0.090 . EDI_020730 99 WERELTR|QC 0.086 . EDI_020730 102 ELTRQCR|LF 0.151 . EDI_020730 107 CRLFELR|NK 0.077 . EDI_020730 109 LFELRNK|PP 0.058 . EDI_020730 119 SVAAASK|ML 0.073 . EDI_020730 129 NILYQYR|NY 0.079 . EDI_020730 144 MICGYDK|TG 0.060 . EDI_020730 158 VEDGGVR|IP 0.071 . EDI_020730 187 YDYNMPK|EK 0.061 . EDI_020730 189 YNMPKEK|AI 0.087 . EDI_020730 195 KAIELAR|RA 0.084 . EDI_020730 196 AIELARR|AI 0.164 . EDI_020730 204 IFHATHR|DV 0.192 . EDI_020730 219 NVIFIDK|DG 0.059 . EDI_020730 223 IDKDGWR|LI 0.083 . EDI_020730 227 GWRLISR|ND 0.075 . EDI_020730 245 NIEEYQK|HG 0.064 . ____________________________^_________________

  • Fasta :-

    >EDI_020730 ATGGAAAGCCTTATTAAAGATTTAAATAAACAAAAAGAAACTAAAAAGGAAAGATTGGTT ATACCTTGTAAAGAGTTAAGTCTACCTAAAGCACTTAGTGAACATAAACATGGAACAACT ACTCTTTCAATGATTATTAAAGAAGGAATTATTGTGGCTGTTGATTCAAGAGCCACTCGT GGTGCTTTTATTTCATCTGGTAGTGTACAAAAATATATTCCTATTACTAGTCATATAATT GGTACAATGGCAGGAGGTGCAGCAGATTGTGCATATTGGGAACGAGAATTAACAAGACAA TGCCGATTATTTGAGTTAAGAAATAAACCACCAATTAGTGTTGCAGCAGCATCAAAGATG TTAGCAAATATATTATATCAATATCGTAATTATAATTTAAGTGTTGGATCAATGATTTGT GGATATGATAAAACAGGACCACATATTTTTTATGTAGAAGATGGAGGAGTTAGAATCCCA GGACATTTGTTTTCTGTTGGAAGTGGATCACCATATGCTGTATCTCTTATTGATTCAGAA TATGATTATAATATGCCAAAAGAAAAAGCTATTGAATTAGCACGTCGAGCAATTTTTCAT GCTACACATCGTGATGTTGCATCAGGAGGAAATGTAAATGTAATCTTTATAGATAAAGAT GGATGGAGATTAATATCAAGAAATGATTGTTATGATTTATATTATGATCATTACAATATA GAAGAATATCAAAAACATGGACAAATGGAAGAAGATTAA
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  • Fasta :-

    MESLIKDLNKQKETKKERLVIPCKELSLPKALSEHKHGTTTLSMIIKEGIIVAVDSRATR GAFISSGSVQKYIPITSHIIGTMAGGAADCAYWERELTRQCRLFELRNKPPISVAAASKM LANILYQYRNYNLSVGSMICGYDKTGPHIFYVEDGGVRIPGHLFSVGSGSPYAVSLIDSE YDYNMPKEKAIELARRAIFHATHRDVASGGNVNVIFIDKDGWRLISRNDCYDLYYDHYNI EEYQKHGQMEED

  • title: active site
  • coordinates: T39,D55,R57,K71,S168,D205,S208,G209
No Results
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No Results

EDI_020730      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India