EDI_021380 | signal peptide peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_021380OTHER0.9998620.0000350.000103
No Results

  • Fasta :-

    >EDI_021380 MLELIQLITLTVIIHYLSCKFKVYFIHWHLDTISQSKLQWKHVIIIPFIGSLFLIFVFFY PSTAKYFIYASVFFSAISCFYLILQPIFDYAPLLSSKVRICLSLLISLTIIFIYLLTQTR WSSNVIAIGIAVAIQSFLFVDKIHIPLVLLSVMFFYDIFWVFGSVNVSLFGGKSVMVEAA KTATSLRLPLLIEFIDGKFLIGLGDIILPGIFINYAYCIDLFYKTKYFISTLLGYCFGLI LTLFVLWNFKVGQPALLYLVPSMFVPFLIYAYHSKTIKTIFSLSLTSKFNEIIPLPELTL TSDFSHEPPILSEQQLTIQLE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_021380.fa Sequence name : EDI_021380 Sequence length : 321 VALUES OF COMPUTED PARAMETERS Coef20 : 4.330 CoefTot : -1.538 ChDiff : 3 ZoneTo : 192 KR : 12 DE : 6 CleavSite : 122 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.718 2.924 0.595 1.048 MesoH : 1.240 1.610 0.171 0.607 MuHd_075 : 32.090 20.994 8.726 6.683 MuHd_095 : 29.658 22.997 8.955 6.703 MuHd_100 : 25.515 23.288 8.056 6.859 MuHd_105 : 29.148 26.221 8.938 7.584 Hmax_075 : 13.183 22.517 5.059 7.688 Hmax_095 : 18.600 21.800 4.057 6.492 Hmax_100 : 17.200 23.700 4.892 6.980 Hmax_105 : 7.000 13.900 1.612 7.607 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9795 0.0205 DFMC : 0.6177 0.3823
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 321 EDI_021380 MLELIQLITLTVIIHYLSCKFKVYFIHWHLDTISQSKLQWKHVIIIPFIGSLFLIFVFFYPSTAKYFIYASVFFSAISCF 80 YLILQPIFDYAPLLSSKVRICLSLLISLTIIFIYLLTQTRWSSNVIAIGIAVAIQSFLFVDKIHIPLVLLSVMFFYDIFW 160 VFGSVNVSLFGGKSVMVEAAKTATSLRLPLLIEFIDGKFLIGLGDIILPGIFINYAYCIDLFYKTKYFISTLLGYCFGLI 240 LTLFVLWNFKVGQPALLYLVPSMFVPFLIYAYHSKTIKTIFSLSLTSKFNEIIPLPELTLTSDFSHEPPILSEQQLTIQL 320 E 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 . 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_021380 20 IHYLSCK|FK 0.068 . EDI_021380 22 YLSCKFK|VY 0.076 . EDI_021380 37 DTISQSK|LQ 0.058 . EDI_021380 41 QSKLQWK|HV 0.098 . EDI_021380 65 FYPSTAK|YF 0.060 . EDI_021380 97 APLLSSK|VR 0.051 . EDI_021380 99 LLSSKVR|IC 0.104 . EDI_021380 120 YLLTQTR|WS 0.086 . EDI_021380 142 SFLFVDK|IH 0.059 . EDI_021380 173 VSLFGGK|SV 0.084 . EDI_021380 181 VMVEAAK|TA 0.064 . EDI_021380 187 KTATSLR|LP 0.075 . EDI_021380 198 IEFIDGK|FL 0.068 . EDI_021380 224 CIDLFYK|TK 0.056 . EDI_021380 226 DLFYKTK|YF 0.070 . EDI_021380 250 FVLWNFK|VG 0.055 . EDI_021380 275 IYAYHSK|TI 0.073 . EDI_021380 278 YHSKTIK|TI 0.068 . EDI_021380 288 SLSLTSK|FN 0.084 . ____________________________^_________________

  • Fasta :-

    >EDI_021380 ATGTTAGAACTTATTCAGTTGATTACTCTTACTGTAATCATTCATTACTTATCTTGTAAA TTTAAAGTCTATTTTATTCATTGGCATTTAGATACTATTTCTCAATCAAAATTACAATGG AAACATGTAATTATTATTCCTTTTATTGGTTCATTATTTCTTATCTTTGTTTTCTTTTAT CCATCTACAGCTAAATATTTTATTTATGCATCTGTATTTTTTTCTGCAATTTCTTGTTTT TATTTAATACTTCAACCAATTTTTGATTATGCCCCATTACTATCTTCAAAAGTTAGAATT TGTTTATCTTTGTTAATTTCATTAACAATTATTTTTATTTATCTTCTTACACAAACACGT TGGAGTTCTAATGTTATTGCTATTGGAATTGCAGTAGCAATTCAATCGTTTCTATTTGTT GATAAAATTCATATCCCATTAGTTCTTCTTTCTGTTATGTTCTTTTATGATATCTTTTGG GTATTTGGTTCAGTTAATGTTTCATTATTTGGTGGTAAATCAGTAATGGTTGAAGCTGCA AAAACAGCAACTTCATTGAGACTTCCTTTATTAATAGAATTCATTGATGGAAAGTTTTTA ATTGGATTAGGAGATATTATTCTTCCCGGTATATTTATTAACTATGCCTATTGTATTGAT TTGTTTTATAAAACGAAATACTTCATTTCAACTTTGCTCGGTTATTGTTTTGGTTTAATC TTGACATTATTTGTTTTATGGAATTTTAAGGTTGGCCAACCAGCTTTACTTTATCTTGTT CCTTCAATGTTTGTTCCTTTCTTAATTTATGCTTATCACTCAAAAACAATCAAAACAATC TTCTCTCTTAGTTTAACTTCGAAATTTAATGAAATAATTCCTCTTCCTGAACTTACTCTG ACTTCTGACTTTTCGCATGAACCTCCTATCCTTTCAGAACAACAACTAACTATTCAGTTA GAATAA
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  • Fasta :-

    MLELIQLITLTVIIHYLSCKFKVYFIHWHLDTISQSKLQWKHVIIIPFIGSLFLIFVFFY PSTAKYFIYASVFFSAISCFYLILQPIFDYAPLLSSKVRICLSLLISLTIIFIYLLTQTR WSSNVIAIGIAVAIQSFLFVDKIHIPLVLLSVMFFYDIFWVFGSVNVSLFGGKSVMVEAA KTATSLRLPLLIEFIDGKFLIGLGDIILPGIFINYAYCIDLFYKTKYFISTLLGYCFGLI LTLFVLWNFKVGQPALLYLVPSMFVPFLIYAYHSKTIKTIFSLSLTSKFNEIIPLPELTL TSDFSHEPPILSEQQLTIQLE

    No Results
    No Results
IDSitePositionGscoreIscore
EDI_021380T3170.5090.086
IDSitePositionGscoreIscore
EDI_021380T3170.5090.086
No Results

EDI_021380      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India