EDI_025400 | 1-O-acylceramide synthase precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008374      

  • Computed_GO_Functions:  O-acyltransferase activity      

  • Computed_GO_Process_IDs:  GO:0006629      

  • Computed_GO_Processes:  lipid metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_025400SP0.0002110.9997850.000004CS pos: 15-16. TIA-ET. Pr: 0.6452
No Results

  • Fasta :-

    >EDI_025400 MNILFLCLLLSITIAETCTRHPVIIIPGIMASMLNAKINIPKSVDFCDRKLDCDRSKDWF TLWLNLLDGIPYVNDCYIAYLTCHYNSTSGRMENVEGVQIEPPRFGSTYAVDTISPSFPL KTFSRAFHEIIKGLEKIGYKDEFDLFSAPYDWRYYHHDEYYEKVKELIIKAYENTGNKVV LVSHSMGGLTTYILLDKLGKEFCDKYIHRWVAMSTPFIGTTIANDIVLSGYNMGYPVSKE LIKKASRTFETVAMMGPIGEYWDQNEVLVELANGKKYYPKDQVELFSQLEEMKPFAKEAV ENSFAPYLKKYNSQVPHGVEMHCGITSGIETAHKITFKGDTFDSKSTIEFVDGDQEVTLN SLEXXTLNSLEYCKKMTENFTNLGKYTHQGMLLKKEVIEYVKNLACD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_025400.fa Sequence name : EDI_025400 Sequence length : 407 VALUES OF COMPUTED PARAMETERS Coef20 : 4.976 CoefTot : -0.483 ChDiff : -10 ZoneTo : 44 KR : 3 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.682 2.100 0.443 0.649 MesoH : -0.399 0.568 -0.304 0.240 MuHd_075 : 28.891 22.264 9.238 6.359 MuHd_095 : 28.155 19.706 8.891 6.281 MuHd_100 : 23.922 17.883 8.704 5.876 MuHd_105 : 21.153 15.328 7.003 5.531 Hmax_075 : 17.600 22.600 5.632 6.670 Hmax_095 : 16.800 19.775 6.717 6.361 Hmax_100 : 15.800 20.700 6.717 6.630 Hmax_105 : 14.875 17.500 5.846 5.757 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6836 0.3164 DFMC : 0.7604 0.2396
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 407 EDI_025400 MNILFLCLLLSITIAETCTRHPVIIIPGIMASMLNAKINIPKSVDFCDRKLDCDRSKDWFTLWLNLLDGIPYVNDCYIAY 80 LTCHYNSTSGRMENVEGVQIEPPRFGSTYAVDTISPSFPLKTFSRAFHEIIKGLEKIGYKDEFDLFSAPYDWRYYHHDEY 160 YEKVKELIIKAYENTGNKVVLVSHSMGGLTTYILLDKLGKEFCDKYIHRWVAMSTPFIGTTIANDIVLSGYNMGYPVSKE 240 LIKKASRTFETVAMMGPIGEYWDQNEVLVELANGKKYYPKDQVELFSQLEEMKPFAKEAVENSFAPYLKKYNSQVPHGVE 320 MHCGITSGIETAHKITFKGDTFDSKSTIEFVDGDQEVTLNSLEXXTLNSLEYCKKMTENFTNLGKYTHQGMLLKKEVIEY 400 VKNLACD 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_025400 20 IAETCTR|HP 0.091 . EDI_025400 37 ASMLNAK|IN 0.069 . EDI_025400 42 AKINIPK|SV 0.111 . EDI_025400 49 SVDFCDR|KL 0.082 . EDI_025400 50 VDFCDRK|LD 0.067 . EDI_025400 55 RKLDCDR|SK 0.115 . EDI_025400 57 LDCDRSK|DW 0.076 . EDI_025400 91 YNSTSGR|ME 0.131 . EDI_025400 104 VQIEPPR|FG 0.106 . EDI_025400 121 SPSFPLK|TF 0.098 . EDI_025400 125 PLKTFSR|AF 0.121 . EDI_025400 132 AFHEIIK|GL 0.072 . EDI_025400 136 IIKGLEK|IG 0.060 . EDI_025400 140 LEKIGYK|DE 0.066 . EDI_025400 153 SAPYDWR|YY 0.101 . EDI_025400 163 HDEYYEK|VK 0.062 . EDI_025400 165 EYYEKVK|EL 0.062 . EDI_025400 170 VKELIIK|AY 0.071 . EDI_025400 178 YENTGNK|VV 0.063 . EDI_025400 197 TYILLDK|LG 0.055 . EDI_025400 200 LLDKLGK|EF 0.062 . EDI_025400 205 GKEFCDK|YI 0.079 . EDI_025400 209 CDKYIHR|WV 0.132 . EDI_025400 239 MGYPVSK|EL 0.069 . EDI_025400 243 VSKELIK|KA 0.075 . EDI_025400 244 SKELIKK|AS 0.117 . EDI_025400 247 LIKKASR|TF 0.099 . EDI_025400 275 VELANGK|KY 0.059 . EDI_025400 276 ELANGKK|YY 0.091 . EDI_025400 280 GKKYYPK|DQ 0.077 . EDI_025400 293 SQLEEMK|PF 0.060 . EDI_025400 297 EMKPFAK|EA 0.068 . EDI_025400 309 SFAPYLK|KY 0.068 . EDI_025400 310 FAPYLKK|YN 0.165 . EDI_025400 334 GIETAHK|IT 0.067 . EDI_025400 338 AHKITFK|GD 0.062 . EDI_025400 345 GDTFDSK|ST 0.082 . EDI_025400 374 NSLEYCK|KM 0.057 . EDI_025400 375 SLEYCKK|MT 0.107 . EDI_025400 385 NFTNLGK|YT 0.071 . EDI_025400 394 HQGMLLK|KE 0.054 . EDI_025400 395 QGMLLKK|EV 0.137 . EDI_025400 402 EVIEYVK|NL 0.054 . ____________________________^_________________

  • Fasta :-

    >EDI_025400 ATGAACATACTCTTTCTTTGCTTGCTTTTATCTATTACTATTGCTGAAACTTGTACTCGT CATCCAGTCATTATTATTCCTGGAATTATGGCTTCAATGCTCAATGCTAAAATAAATATC CCTAAGAGTGTTGACTTTTGTGATAGAAAACTTGATTGCGATAGATCTAAAGATTGGTTC ACTTTATGGTTAAATTTGTTAGATGGAATTCCATATGTCAATGATTGTTACATTGCTTAT TTAACATGTCATTATAATTCTACTTCAGGTAGAATGGAGAATGTTGAAGGAGTACAAATA GAACCTCCAAGATTTGGATCCACTTATGCTGTAGATACTATTTCTCCATCATTTCCATTA AAGACATTTTCTCGTGCATTCCATGAAATTATAAAAGGATTAGAAAAAATTGGATATAAA GACGAATTTGATTTGTTCTCTGCACCTTATGATTGGAGGTATTATCACCATGATGAATAT TATGAAAAAGTTAAGGAATTAATAATTAAAGCTTATGAAAATACAGGTAATAAAGTAGTT TTAGTTTCACATTCTATGGGAGGACTAACTACTTATATTTTATTAGATAAACTTGGCAAA GAATTTTGTGATAAGTATATTCATAGATGGGTTGCTATGTCTACTCCATTCATTGGGACA ACTATCGCTAATGACATTGTTCTTTCTGGATATAATATGGGATATCCTGTTTCTAAAGAG TTAATTAAAAAAGCATCAAGAACATTTGAAACAGTAGCTATGATGGGACCTATTGGGGAG TATTGGGACCAAAATGAAGTTTTAGTAGAATTAGCTAATGGTAAAAAATATTATCCAAAA GATCAAGTTGAGTTATTTAGTCAATTAGAAGAAATGAAACCTTTTGCTAAAGAAGCAGTA GAAAATTCATTTGCACCATATCTTAAGAAATATAATTCACAAGTACCACATGGAGTAGAA ATGCATTGTGGTATTACAAGTGGAATAGAAACTGCACATAAAATAACTTTTAAGGGAGAT ACTTTTGACTCTAAATCAACTATCGAATTTGTAGATGGTGATCAAGAAGTTACTTTGAAT AGTTTAGAANNNNTTACTTTGAATAGTTTAGAATATTGTAAAAAGATGACAGAAAACTTT ACTAATTTAGGTAAATATACTCATCAAGGAATGTTGTTAAAGAAAGAAGTAATTGAGTAT GTTAAAAATCTTGCTTGTGACTAA
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  • Fasta :-

    MNILFLCLLLSITIAETCTRHPVIIIPGIMASMLNAKINIPKSVDFCDRKLDCDRSKDWF TLWLNLLDGIPYVNDCYIAYLTCHYNSTSGRMENVEGVQIEPPRFGSTYAVDTISPSFPL KTFSRAFHEIIKGLEKIGYKDEFDLFSAPYDWRYYHHDEYYEKVKELIIKAYENTGNKVV LVSHSMGGLTTYILLDKLGKEFCDKYIHRWVAMSTPFIGTTIANDIVLSGYNMGYPVSKE LIKKASRTFETVAMMGPIGEYWDQNEVLVELANGKKYYPKDQVELFSQLEEMKPFAKEAV ENSFAPYLKKYNSQVPHGVEMHCGITSGIETAHKITFKGDTFDSKSTIEFVDGDQEVTLN SLEXXTLNSLEYCKKMTENFTNLGKYTHQGMLLKKEVIEYVKNLACD

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EDI_025400346 SFDSKSTIEF0.994unsp

EDI_025400      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India