EDI_038440 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_038440OTHER0.9999720.0000250.000003
No Results

  • Fasta :-

    >EDI_038440 MVEECWNKITTTAEIFQEYCSEIGVDGIHFEDVYSLEEQLDKGTKGFIVSLPYPIQNTDF YENNYQTEHHPFFIHQTIGNICPLMAIIHILINSPSVQYQSDGTYGRFIRSLQQTQTKEE ITQCFQIFKQIHFQISKRCCTKEDEERENIQEVYHCIAIIPFGSHIFVLDGRKGSYCVLS LTSRSSFVSQALSFICNNAPSNGLFSVVSLC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_038440.fa Sequence name : EDI_038440 Sequence length : 211 VALUES OF COMPUTED PARAMETERS Coef20 : 3.736 CoefTot : 0.000 ChDiff : -10 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.535 1.741 0.218 0.711 MesoH : -0.449 0.342 -0.271 0.231 MuHd_075 : 44.161 20.361 11.692 6.538 MuHd_095 : 32.640 21.058 9.935 5.153 MuHd_100 : 42.281 28.302 12.977 7.297 MuHd_105 : 40.549 28.799 12.796 7.850 Hmax_075 : 14.933 10.733 2.184 3.547 Hmax_095 : 12.425 11.813 2.127 4.559 Hmax_100 : 17.600 17.000 4.245 5.370 Hmax_105 : 18.317 20.767 5.615 6.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8346 0.1654 DFMC : 0.8522 0.1478
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 211 EDI_038440 MVEECWNKITTTAEIFQEYCSEIGVDGIHFEDVYSLEEQLDKGTKGFIVSLPYPIQNTDFYENNYQTEHHPFFIHQTIGN 80 ICPLMAIIHILINSPSVQYQSDGTYGRFIRSLQQTQTKEEITQCFQIFKQIHFQISKRCCTKEDEERENIQEVYHCIAII 160 PFGSHIFVLDGRKGSYCVLSLTSRSSFVSQALSFICNNAPSNGLFSVVSLC 240 ................................................................................ 80 .............................P.................................................. 160 ................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EDI_038440 8 VEECWNK|IT 0.066 . EDI_038440 42 LEEQLDK|GT 0.066 . EDI_038440 45 QLDKGTK|GF 0.067 . EDI_038440 107 SDGTYGR|FI 0.126 . EDI_038440 110 TYGRFIR|SL 0.559 *ProP* EDI_038440 118 LQQTQTK|EE 0.069 . EDI_038440 129 QCFQIFK|QI 0.067 . EDI_038440 137 IHFQISK|RC 0.064 . EDI_038440 138 HFQISKR|CC 0.202 . EDI_038440 142 SKRCCTK|ED 0.075 . EDI_038440 147 TKEDEER|EN 0.095 . EDI_038440 172 IFVLDGR|KG 0.077 . EDI_038440 173 FVLDGRK|GS 0.068 . EDI_038440 184 VLSLTSR|SS 0.140 . ____________________________^_________________

  • Fasta :-

    >EDI_038440 ATGGTCGAAGAGTGTTGGAATAAAATCACTACAACAGCTGAAATATTTCAAGAATATTGC TCAGAGATTGGGGTTGATGGAATTCACTTTGAAGATGTCTATTCTTTAGAAGAACAACTA GACAAAGGAACTAAAGGGTTTATAGTTAGTCTTCCCTATCCAATTCAAAACACAGATTTT TATGAAAATAATTACCAAACAGAACATCACCCATTTTTTATTCACCAAACTATTGGCAAT ATTTGTCCATTAATGGCAATTATTCATATTTTGATTAATTCACCTTCTGTCCAATACCAA AGTGATGGTACGTATGGTCGTTTTATTCGTTCATTACAACAGACACAAACGAAGGAAGAA ATAACACAATGTTTCCAAATATTTAAACAAATTCATTTTCAAATATCAAAAAGATGTTGT ACAAAAGAAGATGAAGAACGAGAAAACATACAAGAAGTGTACCACTGTATTGCCATTATT CCATTTGGTTCACACATTTTTGTTTTAGATGGGCGAAAGGGAAGTTATTGCGTTCTTTCA TTAACTTCAAGATCTTCATTTGTATCACAAGCACTGTCATTTATTTGTAACAATGCACCA TCAAATGGACTATTTTCAGTAGTGAGTTTATGTTAA
  • Download Fasta

  • Fasta :-

    MVEECWNKITTTAEIFQEYCSEIGVDGIHFEDVYSLEEQLDKGTKGFIVSLPYPIQNTDF YENNYQTEHHPFFIHQTIGNICPLMAIIHILINSPSVQYQSDGTYGRFIRSLQQTQTKEE ITQCFQIFKQIHFQISKRCCTKEDEERENIQEVYHCIAIIPFGSHIFVLDGRKGSYCVLS LTSRSSFVSQALSFICNNAPSNGLFSVVSLC

  • title: catalytic site
  • coordinates: Q76,C82,H155,D170
No Results
No Results
IDSitePeptideScoreMethod
EDI_03844035 SEDVYSLEEQ0.992unsp

EDI_038440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India