EDI_067040 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EDI_067040OTHER0.9999680.0000140.000018
No Results

  • Fasta :-

    >EDI_067040 MDDEQNIYKESTQNIPFLQWLNQKKSNVFSQLYNYIPNNYTSPQLYPNEFIIFLGELFPP HIVRTQTSNFFDVAITHIKAYPALTSLIYFVYRSNFSALPNTSLKSDGGWGCTIRACQML LANAIIKLFGSDNINRKTVIHWFLDFYNVECPYSIHSLFTTQIIVSGNPNGSSFLPLSVV TYALTELVNKDLNRIFECHVITNKFLLNSINKPTIIFIPFTIPDEFNQRLISIFSFNLFA GMVGGCKQKAFYFFGIHHDQLLFLDPHFVRPCASSIMKFDEKDYIAKLSDIKSLHINELE RSVVFSFVIHSFQELTSLQELAKNVLGIDNKQLTIKREECDGFEVLEF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_067040.fa Sequence name : EDI_067040 Sequence length : 348 VALUES OF COMPUTED PARAMETERS Coef20 : 3.029 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.876 1.712 0.333 0.679 MesoH : -0.003 0.588 -0.238 0.318 MuHd_075 : 20.916 10.518 6.314 3.925 MuHd_095 : 24.013 15.989 8.425 4.687 MuHd_100 : 28.116 19.390 8.744 5.672 MuHd_105 : 27.956 18.960 7.807 5.721 Hmax_075 : -1.925 2.100 -2.565 2.160 Hmax_095 : -0.800 3.700 -1.539 2.340 Hmax_100 : 4.100 9.100 -0.246 3.880 Hmax_105 : 0.600 5.200 -1.955 2.712 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9568 0.0432 DFMC : 0.9422 0.0578
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 348 EDI_067040 MDDEQNIYKESTQNIPFLQWLNQKKSNVFSQLYNYIPNNYTSPQLYPNEFIIFLGELFPPHIVRTQTSNFFDVAITHIKA 80 YPALTSLIYFVYRSNFSALPNTSLKSDGGWGCTIRACQMLLANAIIKLFGSDNINRKTVIHWFLDFYNVECPYSIHSLFT 160 TQIIVSGNPNGSSFLPLSVVTYALTELVNKDLNRIFECHVITNKFLLNSINKPTIIFIPFTIPDEFNQRLISIFSFNLFA 240 GMVGGCKQKAFYFFGIHHDQLLFLDPHFVRPCASSIMKFDEKDYIAKLSDIKSLHINELERSVVFSFVIHSFQELTSLQE 320 LAKNVLGIDNKQLTIKREECDGFEVLEF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_067040 9 DEQNIYK|ES 0.067 . EDI_067040 24 LQWLNQK|KS 0.056 . EDI_067040 25 QWLNQKK|SN 0.119 . EDI_067040 64 FPPHIVR|TQ 0.085 . EDI_067040 79 VAITHIK|AY 0.061 . EDI_067040 93 LIYFVYR|SN 0.157 . EDI_067040 105 LPNTSLK|SD 0.120 . EDI_067040 115 GWGCTIR|AC 0.092 . EDI_067040 127 LANAIIK|LF 0.065 . EDI_067040 136 GSDNINR|KT 0.076 . EDI_067040 137 SDNINRK|TV 0.128 . EDI_067040 190 LTELVNK|DL 0.074 . EDI_067040 194 VNKDLNR|IF 0.103 . EDI_067040 204 CHVITNK|FL 0.060 . EDI_067040 212 LLNSINK|PT 0.067 . EDI_067040 229 PDEFNQR|LI 0.081 . EDI_067040 247 GMVGGCK|QK 0.058 . EDI_067040 249 VGGCKQK|AF 0.066 . EDI_067040 270 LDPHFVR|PC 0.083 . EDI_067040 278 CASSIMK|FD 0.074 . EDI_067040 282 IMKFDEK|DY 0.079 . EDI_067040 287 EKDYIAK|LS 0.064 . EDI_067040 292 AKLSDIK|SL 0.075 . EDI_067040 301 HINELER|SV 0.180 . EDI_067040 323 SLQELAK|NV 0.077 . EDI_067040 331 VLGIDNK|QL 0.065 . EDI_067040 336 NKQLTIK|RE 0.064 . EDI_067040 337 KQLTIKR|EE 0.155 . ____________________________^_________________

  • Fasta :-

    >EDI_067040 ATGGATGATGAACAAAATATTTACAAAGAATCAACTCAAAATATACCATTTTTACAATGG CTTAATCAAAAAAAATCAAATGTATTTTCTCAATTATATAATTATATTCCCAATAATTAT ACCTCTCCTCAATTATACCCAAATGAATTTATAATTTTCTTAGGTGAATTATTTCCTCCC CATATTGTTAGAACTCAAACATCAAATTTTTTTGATGTTGCCATTACTCATATAAAAGCA TATCCTGCATTAACTTCATTAATATATTTTGTTTATCGATCTAACTTTAGTGCATTACCA AATACATCTTTGAAATCTGATGGTGGATGGGGATGTACAATACGTGCATGTCAAATGTTA TTAGCTAATGCAATAATAAAATTATTTGGTTCAGATAATATTAATAGGAAAACAGTGATT CATTGGTTTCTTGATTTTTATAATGTTGAATGCCCTTATTCTATTCATTCGTTATTTACT ACTCAAATTATTGTTAGTGGAAATCCTAATGGTAGTTCTTTTCTTCCACTTTCAGTAGTA ACTTATGCACTTACAGAATTAGTAAATAAAGATTTAAATAGAATATTTGAATGTCATGTA ATAACTAATAAATTTTTATTAAATTCAATCAATAAACCAACCATTATTTTTATTCCTTTT ACAATTCCAGATGAATTTAATCAAAGATTAATTAGTATATTTTCTTTTAATTTATTTGCT GGAATGGTTGGTGGTTGTAAACAAAAAGCGTTTTATTTCTTTGGGATACATCACGATCAA TTACTTTTTCTTGACCCTCATTTTGTACGTCCATGTGCATCTTCTATTATGAAATTTGAT GAAAAAGATTATATCGCAAAATTATCAGATATTAAATCCCTTCATATAAATGAATTGGAA CGATCAGTTGTTTTTTCATTTGTTATTCACTCATTTCAGGAATTAACTTCTCTTCAAGAA TTAGCAAAAAATGTTTTAGGAATTGATAATAAACAATTAACAATCAAACGAGAAGAATGT GATGGCTTTGAAGTTCTTGAATTTTAA
  • Download Fasta

  • Fasta :-

    MDDEQNIYKESTQNIPFLQWLNQKKSNVFSQLYNYIPNNYTSPQLYPNEFIIFLGELFPP HIVRTQTSNFFDVAITHIKAYPALTSLIYFVYRSNFSALPNTSLKSDGGWGCTIRACQML LANAIIKLFGSDNINRKTVIHWFLDFYNVECPYSIHSLFTTQIIVSGNPNGSSFLPLSVV TYALTELVNKDLNRIFECHVITNKFLLNSINKPTIIFIPFTIPDEFNQRLISIFSFNLFA GMVGGCKQKAFYFFGIHHDQLLFLDPHFVRPCASSIMKFDEKDYIAKLSDIKSLHINELE RSVVFSFVIHSFQELTSLQELAKNVLGIDNKQLTIKREECDGFEVLEF

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EDI_067040      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India