EDI_072190 | 26S protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_072190OTHER0.9997120.0001230.000165
No Results

  • Fasta :-

    >EDI_072190 MTYEYSSELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIKAVGKDKVLVKSA QEGKYVVKVEAGIDIKSLKPNQRVALKSDTYSICKVLPNQVDPLVSLMRVEKVPDSTYDM IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT FIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIEGKSGGDSEVQ RTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEARLDILK IHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGMFALRERRSHVTQEDFELAAAKV MKKDNNASVSLQQLWK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_072190.fa Sequence name : EDI_072190 Sequence length : 376 VALUES OF COMPUTED PARAMETERS Coef20 : 4.104 CoefTot : -0.157 ChDiff : 5 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.394 0.806 -0.054 0.428 MesoH : -0.744 0.197 -0.407 0.173 MuHd_075 : 42.101 17.086 9.417 6.783 MuHd_095 : 16.466 13.674 4.764 5.544 MuHd_100 : 26.202 17.142 7.680 6.341 MuHd_105 : 28.825 17.282 8.778 6.198 Hmax_075 : 0.525 0.233 -2.743 0.222 Hmax_095 : -1.138 1.838 -1.510 1.070 Hmax_100 : -0.900 5.700 -1.862 2.910 Hmax_105 : 5.950 7.700 -0.077 3.453 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4391 0.5609 DFMC : 0.5756 0.4244
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 376 EDI_072190 MTYEYSSELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIKAVGKDKVLVKSAQEGKYVVKVEAGIDIKSLKP 80 NQRVALKSDTYSICKVLPNQVDPLVSLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYG 160 PPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIEGKSGGDSEVQ 240 RTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEARLDILKIHSKKMNLVRGIDLKKIAER 320 LDGASGAEIKACCTEAGMFALRERRSHVTQEDFELAAAKVMKKDNNASVSLQQLWK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................P............................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EDI_072190 13 SELQNQR|RL 0.082 . EDI_072190 14 ELQNQRR|LI 0.152 . EDI_072190 18 QRRLISK|RN 0.061 . EDI_072190 19 RRLISKR|NQ 0.145 . EDI_072190 27 QLNDQVR|RM 0.095 . EDI_072190 28 LNDQVRR|MK 0.159 . EDI_072190 30 DQVRRMK|EE 0.103 . EDI_072190 48 SVGEVIK|AV 0.088 . EDI_072190 52 VIKAVGK|DK 0.064 . EDI_072190 54 KAVGKDK|VL 0.063 . EDI_072190 58 KDKVLVK|SA 0.100 . EDI_072190 64 KSAQEGK|YV 0.129 . EDI_072190 68 EGKYVVK|VE 0.058 . EDI_072190 76 EAGIDIK|SL 0.077 . EDI_072190 79 IDIKSLK|PN 0.065 . EDI_072190 83 SLKPNQR|VA 0.101 . EDI_072190 87 NQRVALK|SD 0.076 . EDI_072190 95 DTYSICK|VL 0.056 . EDI_072190 109 PLVSLMR|VE 0.069 . EDI_072190 112 SLMRVEK|VP 0.128 . EDI_072190 129 GLDQQIK|EI 0.073 . EDI_072190 132 QQIKEIK|EV 0.072 . EDI_072190 140 VIELPIK|HP 0.058 . EDI_072190 154 LGIAQPK|GV 0.085 . EDI_072190 166 GPPGTGK|TL 0.059 . EDI_072190 171 GKTLLAR|AV 0.134 . EDI_072190 183 TDCTFIR|VS 0.146 . EDI_072190 192 GTELVQK|YI 0.094 . EDI_072190 199 YIGEGSR|MV 0.115 . EDI_072190 202 EGSRMVR|EL 0.260 . EDI_072190 209 ELFVMAR|EH 0.090 . EDI_072190 228 DSIGSSR|IE 0.116 . EDI_072190 232 SSRIEGK|SG 0.160 . EDI_072190 241 GDSEVQR|TM 0.101 . EDI_072190 257 DGFEPTK|NI 0.063 . EDI_072190 260 EPTKNIK|VL 0.060 . EDI_072190 267 VLMATNR|ID 0.074 . EDI_072190 277 LDPALLR|PG 0.069 . EDI_072190 280 ALLRPGR|ID 0.229 . EDI_072190 283 RPGRIDR|KI 0.264 . EDI_072190 284 PGRIDRK|IE 0.075 . EDI_072190 291 IEFPNPK|EE 0.056 . EDI_072190 295 NPKEEAR|LD 0.096 . EDI_072190 300 ARLDILK|IH 0.067 . EDI_072190 304 ILKIHSK|KM 0.062 . EDI_072190 305 LKIHSKK|MN 0.099 . EDI_072190 310 KKMNLVR|GI 0.122 . EDI_072190 315 VRGIDLK|KI 0.070 . EDI_072190 316 RGIDLKK|IA 0.100 . EDI_072190 320 LKKIAER|LD 0.110 . EDI_072190 330 ASGAEIK|AC 0.074 . EDI_072190 342 AGMFALR|ER 0.079 . EDI_072190 344 MFALRER|RS 0.089 . EDI_072190 345 FALRERR|SH 0.616 *ProP* EDI_072190 359 FELAAAK|VM 0.058 . EDI_072190 362 AAAKVMK|KD 0.072 . EDI_072190 363 AAKVMKK|DN 0.129 . EDI_072190 376 SLQQLWK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >EDI_072190 ATGACATACGAGTATTCGAGTGAGTTACAAAATCAACGAAGATTAATTTCTAAAAGAAAT CAATTAAATGACCAAGTAAGAAGAATGAAAGAAGAACTTCAATTACTTTCGGAACCATCA TGTTCAGTTGGAGAAGTTATCAAAGCAGTAGGAAAAGATAAGGTATTAGTTAAATCAGCA CAAGAAGGCAAATATGTTGTCAAAGTAGAAGCAGGAATTGATATAAAGTCATTGAAACCA AATCAACGAGTGGCACTAAAAAGTGATACATACAGTATTTGTAAAGTTCTTCCTAATCAA GTTGATCCATTAGTATCATTAATGAGAGTAGAAAAAGTACCAGATTCAACATATGACATG ATTGGAGGATTAGATCAACAAATTAAAGAGATTAAAGAAGTAATTGAGTTACCAATCAAA CATCCAGAATTATTTGAATCACTTGGAATTGCACAACCAAAAGGTGTATTATTGTATGGA CCACCAGGAACAGGAAAAACATTATTAGCAAGAGCAGTAGCACACCATACAGATTGTACA TTTATTCGAGTTTCAGGAACTGAGTTAGTACAAAAATATATTGGAGAAGGAAGTAGAATG GTTCGAGAACTATTTGTAATGGCAAGAGAACATGCACCATCTATTATTTTCATGGATGAG ATAGACTCTATTGGATCGAGTCGAATTGAAGGAAAGTCAGGAGGAGATAGTGAAGTACAA CGAACTATGCTAGAATTAGTTAATCAATTAGATGGGTTTGAACCAACAAAAAATATAAAA GTATTAATGGCAACAAATAGAATAGATATTTTAGATCCAGCATTATTAAGACCAGGACGA ATTGATAGAAAAATCGAATTCCCTAATCCAAAAGAAGAAGCACGTTTAGACATTCTTAAG ATTCATTCTAAGAAGATGAATTTAGTTCGTGGAATCGATCTCAAGAAAATTGCAGAACGA TTGGATGGAGCATCTGGTGCAGAAATTAAAGCATGTTGCACAGAAGCAGGTATGTTTGCA CTTCGGGAAAGAAGGTCTCATGTAACACAAGAAGATTTTGAATTAGCAGCTGCTAAAGTA ATGAAGAAAGATAACAATGCATCTGTCTCATTACAACAATTATGGAAATAA
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  • Fasta :-

    MTYEYSSELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIKAVGKDKVLVKSA QEGKYVVKVEAGIDIKSLKPNQRVALKSDTYSICKVLPNQVDPLVSLMRVEKVPDSTYDM IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT FIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIEGKSGGDSEVQ RTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEARLDILK IHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGMFALRERRSHVTQEDFELAAAKV MKKDNNASVSLQQLWK

  • title: ATP binding site
  • coordinates: P161,P162,G163,T164,G165,K166,T167,L168,D219,N266
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_072190227 SSIGSSRIEG0.993unspEDI_072190227 SSIGSSRIEG0.993unspEDI_072190227 SSIGSSRIEG0.993unspEDI_072190233 SIEGKSGGDS0.998unspEDI_072190116 SKVPDSTYDM0.997unspEDI_072190185 SFIRVSGTEL0.996unsp

EDI_072190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India