EDI_079160 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_079160SP0.2324690.6748340.092697CS pos: 12-13. SLG-FR. Pr: 0.3909
No Results

  • Fasta :-

    >EDI_079160 MFLFLLLTTSLGFRFQNIRFGRETDKSDVIEHVSTQPIDHFDLTNKKTINIRYFINDTIY SKEAPLLVDLGGEGPQKAAAVGGRFVINKYAEKYNSLMLAIEHRFYGKSVPEGGLSQENL GYLSAAQALEDYIMIINQIKKEYQVTGPVIVFGGSYSGNLAAWIRQKYPNVVYAAVASSA PVYATSTFYEFLDVIYNDMGEKCGNAWKEATESIEELFKTDSGKAQLKSDFNACTDINGE DDLTILIQQIQATMINYPQYNGSYSLTIEGVCSILTTEGKTAYENMVELMNHAFNEFGFK CAPSSYADMLTDMANTKTDEEGNRLASTRSWAWQICSEYSYFQPVNESLPFSKRLNNEFY YLLCKDIFNVDKQRLDRRVHHTNLMYGGYQPKATNVAYTSGSTDPWSPLAKHETLPSDIN CYASHIKGTAHCADLYAEKDTDPEQLKQQRIETAQFIDELISRYHN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_079160.fa Sequence name : EDI_079160 Sequence length : 466 VALUES OF COMPUTED PARAMETERS Coef20 : 4.920 CoefTot : 0.338 ChDiff : -16 ZoneTo : 22 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.300 1.212 0.145 0.590 MesoH : -0.216 0.344 -0.302 0.281 MuHd_075 : 19.143 10.842 3.424 5.185 MuHd_095 : 19.939 11.697 3.199 3.463 MuHd_100 : 15.601 9.627 3.257 2.892 MuHd_105 : 17.015 8.767 3.776 3.565 Hmax_075 : 13.650 13.100 1.069 5.330 Hmax_095 : 9.625 15.050 3.611 3.561 Hmax_100 : 11.100 17.000 3.124 4.180 Hmax_105 : 17.000 12.600 1.607 4.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1593 0.8407 DFMC : 0.2462 0.7538 This protein is probably imported in mitochondria. f(Ser) = 0.0455 f(Arg) = 0.1364 CMi = 0.17422 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 466 EDI_079160 MFLFLLLTTSLGFRFQNIRFGRETDKSDVIEHVSTQPIDHFDLTNKKTINIRYFINDTIYSKEAPLLVDLGGEGPQKAAA 80 VGGRFVINKYAEKYNSLMLAIEHRFYGKSVPEGGLSQENLGYLSAAQALEDYIMIINQIKKEYQVTGPVIVFGGSYSGNL 160 AAWIRQKYPNVVYAAVASSAPVYATSTFYEFLDVIYNDMGEKCGNAWKEATESIEELFKTDSGKAQLKSDFNACTDINGE 240 DDLTILIQQIQATMINYPQYNGSYSLTIEGVCSILTTEGKTAYENMVELMNHAFNEFGFKCAPSSYADMLTDMANTKTDE 320 EGNRLASTRSWAWQICSEYSYFQPVNESLPFSKRLNNEFYYLLCKDIFNVDKQRLDRRVHHTNLMYGGYQPKATNVAYTS 400 GSTDPWSPLAKHETLPSDINCYASHIKGTAHCADLYAEKDTDPEQLKQQRIETAQFIDELISRYHN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_079160 14 TTSLGFR|FQ 0.093 . EDI_079160 19 FRFQNIR|FG 0.084 . EDI_079160 22 QNIRFGR|ET 0.481 . EDI_079160 26 FGRETDK|SD 0.073 . EDI_079160 46 HFDLTNK|KT 0.059 . EDI_079160 47 FDLTNKK|TI 0.074 . EDI_079160 52 KKTINIR|YF 0.080 . EDI_079160 62 NDTIYSK|EA 0.055 . EDI_079160 77 GGEGPQK|AA 0.074 . EDI_079160 84 AAAVGGR|FV 0.160 . EDI_079160 89 GRFVINK|YA 0.107 . EDI_079160 93 INKYAEK|YN 0.070 . EDI_079160 104 MLAIEHR|FY 0.178 . EDI_079160 108 EHRFYGK|SV 0.123 . EDI_079160 140 MIINQIK|KE 0.064 . EDI_079160 141 IINQIKK|EY 0.103 . EDI_079160 165 NLAAWIR|QK 0.091 . EDI_079160 167 AAWIRQK|YP 0.067 . EDI_079160 202 YNDMGEK|CG 0.056 . EDI_079160 208 KCGNAWK|EA 0.071 . EDI_079160 219 SIEELFK|TD 0.060 . EDI_079160 224 FKTDSGK|AQ 0.064 . EDI_079160 228 SGKAQLK|SD 0.083 . EDI_079160 280 ILTTEGK|TA 0.065 . EDI_079160 300 FNEFGFK|CA 0.065 . EDI_079160 317 TDMANTK|TD 0.070 . EDI_079160 324 TDEEGNR|LA 0.092 . EDI_079160 329 NRLASTR|SW 0.208 . EDI_079160 353 ESLPFSK|RL 0.062 . EDI_079160 354 SLPFSKR|LN 0.124 . EDI_079160 365 FYYLLCK|DI 0.070 . EDI_079160 372 DIFNVDK|QR 0.061 . EDI_079160 374 FNVDKQR|LD 0.097 . EDI_079160 377 DKQRLDR|RV 0.339 . EDI_079160 378 KQRLDRR|VH 0.147 . EDI_079160 392 YGGYQPK|AT 0.073 . EDI_079160 411 PWSPLAK|HE 0.060 . EDI_079160 427 CYASHIK|GT 0.068 . EDI_079160 439 ADLYAEK|DT 0.077 . EDI_079160 447 TDPEQLK|QQ 0.066 . EDI_079160 450 EQLKQQR|IE 0.090 . EDI_079160 463 IDELISR|YH 0.083 . ____________________________^_________________

  • Fasta :-

    >EDI_079160 ATGTTTCTTTTCTTATTACTCACAACATCTCTTGGATTCCGTTTCCAAAACATTCGTTTT GGAAGAGAAACAGATAAAAGTGATGTTATAGAACATGTTTCAACACAACCAATTGATCAC TTTGATTTAACTAATAAGAAGACAATAAATATTCGATATTTTATTAATGACACTATATAT AGTAAAGAAGCACCGCTTTTGGTTGATCTTGGAGGAGAAGGACCACAAAAAGCAGCTGCT GTTGGTGGAAGATTTGTTATTAATAAGTATGCAGAGAAATATAATTCATTAATGCTTGCA ATTGAACATAGGTTTTATGGAAAGTCTGTTCCAGAAGGAGGGTTGTCACAAGAAAATCTT GGATACCTTAGTGCAGCTCAAGCTTTAGAAGATTATATTATGATTATTAATCAAATCAAA AAGGAATATCAAGTCACTGGTCCTGTTATAGTCTTTGGTGGTTCATATAGTGGAAACCTT GCTGCTTGGATTAGACAAAAATATCCAAATGTAGTTTATGCAGCTGTGGCTTCATCTGCA CCAGTTTATGCTACATCTACTTTTTATGAATTTTTAGATGTTATTTACAATGATATGGGT GAAAAATGTGGTAACGCTTGGAAAGAAGCTACTGAAAGTATTGAAGAACTTTTCAAAACA GATTCTGGTAAAGCCCAACTTAAGAGTGATTTTAATGCATGTACCGATATTAATGGAGAA GACGACCTTACTATTCTTATTCAACAAATCCAAGCAACAATGATAAATTATCCACAATAT AATGGAAGTTATTCATTAACTATTGAAGGTGTTTGTAGTATATTAACTACTGAAGGAAAA ACAGCTTATGAGAATATGGTTGAATTAATGAATCATGCATTTAATGAATTTGGATTTAAA TGTGCACCATCAAGTTATGCTGATATGCTTACAGATATGGCAAATACTAAAACAGATGAA GAAGGAAATAGACTTGCATCAACAAGAAGTTGGGCATGGCAAATTTGTAGTGAATACAGT TATTTCCAACCAGTTAATGAATCTCTTCCATTTTCAAAGAGACTTAATAATGAATTTTAT TATCTTCTCTGTAAAGATATTTTCAATGTAGACAAACAACGTTTAGATAGAAGAGTTCAT CATACCAATTTAATGTATGGTGGTTATCAACCAAAAGCTACTAATGTAGCTTATACTTCT GGTTCAACTGATCCATGGAGTCCATTGGCTAAACACGAAACCCTTCCTTCAGATATTAAT TGTTATGCTTCTCATATCAAAGGTACTGCTCATTGTGCTGATCTTTATGCTGAGAAAGAT ACTGATCCAGAACAATTAAAACAACAAAGAATAGAAACTGCACAATTCATTGATGAGTTA ATTTCAAGATATCATAATTAA
  • Download Fasta

  • Fasta :-

    MFLFLLLTTSLGFRFQNIRFGRETDKSDVIEHVSTQPIDHFDLTNKKTINIRYFINDTIY SKEAPLLVDLGGEGPQKAAAVGGRFVINKYAEKYNSLMLAIEHRFYGKSVPEGGLSQENL GYLSAAQALEDYIMIINQIKKEYQVTGPVIVFGGSYSGNLAAWIRQKYPNVVYAAVASSA PVYATSTFYEFLDVIYNDMGEKCGNAWKEATESIEELFKTDSGKAQLKSDFNACTDINGE DDLTILIQQIQATMINYPQYNGSYSLTIEGVCSILTTEGKTAYENMVELMNHAFNEFGFK CAPSSYADMLTDMANTKTDEEGNRLASTRSWAWQICSEYSYFQPVNESLPFSKRLNNEFY YLLCKDIFNVDKQRLDRRVHHTNLMYGGYQPKATNVAYTSGSTDPWSPLAKHETLPSDIN CYASHIKGTAHCADLYAEKDTDPEQLKQQRIETAQFIDELISRYHN

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
EDI_079160213 SEATESIEEL0.995unsp

EDI_079160      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India