EDI_092720 | cysteine proteinase 2 precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_092720SP0.0669780.9307070.002316CS pos: 17-18. SFA-IN. Pr: 0.7393
No Results

  • Fasta :-

    >EDI_092720 MYRNNLFFLIVVNFSFAINFDQWKIKYNIKYSGSELLRRRAVFLQNSKLIQMINNQNLSF TVTNEGPFSVLTNEEYKMLHHRIDIEKEIKQLKSHKMNFLKNIDNKEVLDSIDWRSEGKV TPVKNQRKCASCYAFGSVATIESLIMQETHIKEIDLSEQQIVDCSQGEYSNWGCTCGNVG NSFNYIRDHGVLLERDYPYTGKANNCSIDGKKPVIKIKDYSFVFPQTEENLKIAVYHQPV AVSIDSSQPSFQFYEGGIYDEPNCKWVDHIVTVVGYGTTEEHQDFWIVKNSYGNEWGLNG YIYMSRNKNNQCGIATIAVYPKGLIIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_092720.fa Sequence name : EDI_092720 Sequence length : 327 VALUES OF COMPUTED PARAMETERS Coef20 : 4.650 CoefTot : -1.368 ChDiff : -1 ZoneTo : 64 KR : 8 DE : 2 CleavSite : 41 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.529 0.295 0.619 MesoH : -0.908 0.032 -0.454 0.167 MuHd_075 : 36.720 19.099 9.643 7.730 MuHd_095 : 34.481 25.648 10.333 7.506 MuHd_100 : 28.309 19.839 7.372 6.231 MuHd_105 : 30.939 17.213 7.068 5.943 Hmax_075 : 9.000 9.188 0.008 4.260 Hmax_095 : 9.300 11.900 1.415 4.520 Hmax_100 : -0.100 8.800 -1.462 3.130 Hmax_105 : -2.300 5.833 -1.314 2.485 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2193 0.7807 DFMC : 0.4076 0.5924 This protein is probably imported in mitochondria. f(Ser) = 0.0781 f(Arg) = 0.0625 CMi = 0.49603 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 327 EDI_092720 MYRNNLFFLIVVNFSFAINFDQWKIKYNIKYSGSELLRRRAVFLQNSKLIQMINNQNLSFTVTNEGPFSVLTNEEYKMLH 80 HRIDIEKEIKQLKSHKMNFLKNIDNKEVLDSIDWRSEGKVTPVKNQRKCASCYAFGSVATIESLIMQETHIKEIDLSEQQ 160 IVDCSQGEYSNWGCTCGNVGNSFNYIRDHGVLLERDYPYTGKANNCSIDGKKPVIKIKDYSFVFPQTEENLKIAVYHQPV 240 AVSIDSSQPSFQFYEGGIYDEPNCKWVDHIVTVVGYGTTEEHQDFWIVKNSYGNEWGLNGYIYMSRNKNNQCGIATIAVY 320 PKGLIIL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_092720 3 ----MYR|NN 0.074 . EDI_092720 24 INFDQWK|IK 0.064 . EDI_092720 26 FDQWKIK|YN 0.083 . EDI_092720 30 KIKYNIK|YS 0.074 . EDI_092720 38 SGSELLR|RR 0.078 . EDI_092720 39 GSELLRR|RA 0.122 . EDI_092720 40 SELLRRR|AV 0.157 . EDI_092720 48 VFLQNSK|LI 0.056 . EDI_092720 77 LTNEEYK|ML 0.077 . EDI_092720 82 YKMLHHR|ID 0.101 . EDI_092720 87 HRIDIEK|EI 0.071 . EDI_092720 90 DIEKEIK|QL 0.061 . EDI_092720 93 KEIKQLK|SH 0.068 . EDI_092720 96 KQLKSHK|MN 0.065 . EDI_092720 101 HKMNFLK|NI 0.082 . EDI_092720 106 LKNIDNK|EV 0.102 . EDI_092720 115 LDSIDWR|SE 0.248 . EDI_092720 119 DWRSEGK|VT 0.060 . EDI_092720 124 GKVTPVK|NQ 0.059 . EDI_092720 127 TPVKNQR|KC 0.080 . EDI_092720 128 PVKNQRK|CA 0.107 . EDI_092720 152 MQETHIK|EI 0.079 . EDI_092720 187 NSFNYIR|DH 0.111 . EDI_092720 195 HGVLLER|DY 0.083 . EDI_092720 202 DYPYTGK|AN 0.064 . EDI_092720 211 NCSIDGK|KP 0.066 . EDI_092720 212 CSIDGKK|PV 0.138 . EDI_092720 216 GKKPVIK|IK 0.073 . EDI_092720 218 KPVIKIK|DY 0.124 . EDI_092720 232 QTEENLK|IA 0.060 . EDI_092720 265 YDEPNCK|WV 0.085 . EDI_092720 289 QDFWIVK|NS 0.070 . EDI_092720 306 GYIYMSR|NK 0.075 . EDI_092720 308 IYMSRNK|NN 0.064 . EDI_092720 322 TIAVYPK|GL 0.079 . ____________________________^_________________

  • Fasta :-

    >EDI_092720 ATGTATAGAAACAACCTTTTTTTTCTTATTGTTGTTAATTTTAGCTTTGCTATCAATTTT GATCAATGGAAAATCAAATATAACATAAAGTATTCAGGAAGTGAGTTGTTAAGAAGAAGA GCAGTATTTCTTCAAAACTCAAAATTAATTCAAATGATAAATAATCAAAACCTTTCATTT ACTGTCACTAATGAAGGTCCTTTCAGTGTATTAACAAATGAAGAATATAAAATGCTTCAT CATCGCATTGATATAGAAAAGGAGATAAAACAATTAAAATCTCATAAAATGAATTTCCTT AAAAATATTGACAATAAAGAAGTTCTTGATAGTATTGATTGGAGAAGTGAAGGAAAAGTA ACTCCAGTAAAAAATCAAAGAAAGTGTGCTTCATGCTATGCTTTTGGAAGTGTTGCAACA ATAGAATCATTGATAATGCAAGAAACTCATATTAAAGAAATTGATTTATCTGAACAACAA ATAGTAGATTGTAGTCAAGGAGAATATTCTAATTGGGGCTGTACTTGTGGAAATGTAGGA AATAGTTTTAATTATATAAGAGATCATGGGGTTCTTCTTGAGAGAGATTATCCTTATACT GGCAAAGCAAACAATTGTTCTATTGATGGTAAAAAACCAGTGATAAAAATAAAGGATTAT TCTTTTGTTTTTCCACAAACAGAAGAAAATTTAAAAATTGCAGTATATCATCAACCTGTA GCTGTCTCTATTGATTCCTCACAACCAAGTTTTCAATTTTATGAAGGAGGAATATATGAT GAACCAAATTGCAAATGGGTAGATCATATTGTGACAGTTGTTGGATATGGAACGACAGAA GAACATCAAGATTTCTGGATTGTTAAAAATTCATATGGAAATGAATGGGGGTTAAATGGA TATATTTATATGTCACGAAATAAAAACAATCAATGTGGAATAGCAACAATAGCAGTATAT CCAAAAGGACTAATTATTCTTTAA
  • Download Fasta

  • Fasta :-

    MYRNNLFFLIVVNFSFAINFDQWKIKYNIKYSGSELLRRRAVFLQNSKLIQMINNQNLSF TVTNEGPFSVLTNEEYKMLHHRIDIEKEIKQLKSHKMNFLKNIDNKEVLDSIDWRSEGKV TPVKNQRKCASCYAFGSVATIESLIMQETHIKEIDLSEQQIVDCSQGEYSNWGCTCGNVG NSFNYIRDHGVLLERDYPYTGKANNCSIDGKKPVIKIKDYSFVFPQTEENLKIAVYHQPV AVSIDSSQPSFQFYEGGIYDEPNCKWVDHIVTVVGYGTTEEHQDFWIVKNSYGNEWGLNG YIYMSRNKNNQCGIATIAVYPKGLIIL

  • title: active site
  • coordinates: Q126,C132,H269,N290
No Results
No Results
IDSitePeptideScoreMethod
EDI_09272094 SKQLKSHKMN0.994unsp

EDI_092720      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India