EDI_096160 | 26S protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_096160OTHER0.9999130.0000090.000078
No Results

  • Fasta :-

    >EDI_096160 MEEEFEKKPKALDEEEIAILKAYNRGPYANSIKQLEKEVGDLATEIHNLVGIQESDTGLA PVSQWDLNADKKLMEEQPLLVCRCIKAMPDEREPRYVISIKEFARFVVGKSNRVEKNAVQ DGTRVGVDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYKDIGGCKEQIERIKEVVELPM LHPEAFENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAK MVRDLFDMAKSKKSCIIFFDEIDAIGGTRFQDDTGESEVQRTMLELINQLDGFDKRGNIK VLMATNRPDTLDPALVRPGRLDRKIEFGLPDIEGRTEIFKIHTKPMSVAKDIRYDLLARL CPNATGAEIQSVCTEAGMFAIRARRKVVTERDFLDAIEKVIKGYQKFSATPKYLAYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_096160.fa Sequence name : EDI_096160 Sequence length : 417 VALUES OF COMPUTED PARAMETERS Coef20 : 2.766 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.424 0.788 -0.049 0.393 MesoH : -1.038 0.141 -0.478 0.144 MuHd_075 : 7.734 4.306 0.979 0.754 MuHd_095 : 23.599 11.717 5.985 4.270 MuHd_100 : 22.961 10.193 5.247 3.594 MuHd_105 : 25.544 12.712 5.651 4.006 Hmax_075 : -19.250 -2.100 -7.284 0.035 Hmax_095 : -11.200 0.788 -4.796 1.820 Hmax_100 : -13.700 -0.600 -6.427 0.680 Hmax_105 : -15.500 -0.900 -6.239 0.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9759 0.0241 DFMC : 0.9732 0.0268
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 417 EDI_096160 MEEEFEKKPKALDEEEIAILKAYNRGPYANSIKQLEKEVGDLATEIHNLVGIQESDTGLAPVSQWDLNADKKLMEEQPLL 80 VCRCIKAMPDEREPRYVISIKEFARFVVGKSNRVEKNAVQDGTRVGVDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYK 160 DIGGCKEQIERIKEVVELPMLHPEAFENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAK 240 MVRDLFDMAKSKKSCIIFFDEIDAIGGTRFQDDTGESEVQRTMLELINQLDGFDKRGNIKVLMATNRPDTLDPALVRPGR 320 LDRKIEFGLPDIEGRTEIFKIHTKPMSVAKDIRYDLLARLCPNATGAEIQSVCTEAGMFAIRARRKVVTERDFLDAIEKV 400 IKGYQKFSATPKYLAYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................P............... 400 ................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EDI_096160 7 MEEEFEK|KP 0.057 . EDI_096160 8 EEEFEKK|PK 0.082 . EDI_096160 10 EFEKKPK|AL 0.088 . EDI_096160 21 EEIAILK|AY 0.057 . EDI_096160 25 ILKAYNR|GP 0.076 . EDI_096160 33 PYANSIK|QL 0.078 . EDI_096160 37 SIKQLEK|EV 0.088 . EDI_096160 71 WDLNADK|KL 0.062 . EDI_096160 72 DLNADKK|LM 0.098 . EDI_096160 83 QPLLVCR|CI 0.107 . EDI_096160 86 LVCRCIK|AM 0.111 . EDI_096160 92 KAMPDER|EP 0.078 . EDI_096160 95 PDEREPR|YV 0.368 . EDI_096160 101 RYVISIK|EF 0.062 . EDI_096160 105 SIKEFAR|FV 0.165 . EDI_096160 110 ARFVVGK|SN 0.118 . EDI_096160 113 VVGKSNR|VE 0.079 . EDI_096160 116 KSNRVEK|NA 0.237 . EDI_096160 124 AVQDGTR|VG 0.064 . EDI_096160 129 TRVGVDR|AR 0.119 . EDI_096160 131 VGVDRAR|YE 0.083 . EDI_096160 135 RARYEIK|MA 0.071 . EDI_096160 141 KMALPPK|ID 0.065 . EDI_096160 154 VMQVEEK|PD 0.061 . EDI_096160 160 KPDVTYK|DI 0.112 . EDI_096160 166 KDIGGCK|EQ 0.058 . EDI_096160 171 CKEQIER|IK 0.088 . EDI_096160 173 EQIERIK|EV 0.069 . EDI_096160 195 LGIDPPK|GV 0.082 . EDI_096160 207 GPPGTGK|TL 0.058 . EDI_096160 212 GKTLLAR|AV 0.111 . EDI_096160 217 ARAVANR|TE 0.105 . EDI_096160 224 TESTFVR|VI 0.168 . EDI_096160 233 GSELVQK|YV 0.130 . EDI_096160 240 YVGEGAK|MV 0.091 . EDI_096160 243 EGAKMVR|DL 0.128 . EDI_096160 250 DLFDMAK|SK 0.076 . EDI_096160 252 FDMAKSK|KS 0.073 . EDI_096160 253 DMAKSKK|SC 0.177 . EDI_096160 269 DAIGGTR|FQ 0.100 . EDI_096160 281 GESEVQR|TM 0.100 . EDI_096160 295 QLDGFDK|RG 0.060 . EDI_096160 296 LDGFDKR|GN 0.265 . EDI_096160 300 DKRGNIK|VL 0.061 . EDI_096160 307 VLMATNR|PD 0.077 . EDI_096160 317 LDPALVR|PG 0.069 . EDI_096160 320 ALVRPGR|LD 0.292 . EDI_096160 323 RPGRLDR|KI 0.457 . EDI_096160 324 PGRLDRK|IE 0.072 . EDI_096160 335 LPDIEGR|TE 0.092 . EDI_096160 340 GRTEIFK|IH 0.060 . EDI_096160 344 IFKIHTK|PM 0.068 . EDI_096160 350 KPMSVAK|DI 0.102 . EDI_096160 353 SVAKDIR|YD 0.089 . EDI_096160 359 RYDLLAR|LC 0.071 . EDI_096160 382 AGMFAIR|AR 0.090 . EDI_096160 384 MFAIRAR|RK 0.103 . EDI_096160 385 FAIRARR|KV 0.567 *ProP* EDI_096160 386 AIRARRK|VV 0.093 . EDI_096160 391 RKVVTER|DF 0.122 . EDI_096160 399 FLDAIEK|VI 0.058 . EDI_096160 402 AIEKVIK|GY 0.065 . EDI_096160 406 VIKGYQK|FS 0.059 . EDI_096160 412 KFSATPK|YL 0.078 . ____________________________^_________________

  • Fasta :-

    >EDI_096160 ATGGAAGAAGAATTTGAGAAGAAACCAAAAGCACTTGATGAAGAAGAAATCGCTATTTTA AAGGCATATAACCGTGGTCCATATGCAAATTCAATTAAACAATTAGAAAAAGAAGTTGGT GACCTTGCAACAGAAATACATAATTTAGTCGGAATTCAAGAAAGTGATACAGGACTAGCA CCAGTGTCTCAATGGGACTTAAATGCTGATAAAAAGTTGATGGAAGAACAACCATTACTT GTGTGTAGATGTATTAAAGCTATGCCAGATGAACGTGAACCACGATATGTTATTTCAATA AAAGAATTTGCAAGGTTTGTTGTTGGTAAATCAAATAGAGTTGAAAAAAATGCTGTTCAA GATGGAACAAGGGTAGGAGTAGATAGAGCACGTTATGAAATTAAAATGGCACTCCCACCA AAAATTGATCCATCAGTTTCTGTTATGCAAGTTGAAGAAAAACCAGATGTAACATACAAA GATATTGGAGGATGTAAAGAACAAATTGAAAGAATTAAAGAAGTTGTTGAACTTCCTATG TTACATCCAGAAGCATTTGAGAATTTAGGAATTGACCCACCTAAAGGAGTGTTATTATAT GGACCACCAGGAACGGGTAAAACATTGTTAGCACGTGCCGTGGCTAATAGAACAGAATCA ACATTTGTTCGAGTAATTGGATCAGAGTTAGTTCAAAAATATGTTGGAGAAGGTGCTAAA ATGGTAAGAGATTTATTTGACATGGCTAAAAGTAAAAAGAGTTGTATTATTTTCTTTGAT GAGATTGATGCTATTGGAGGAACTAGATTCCAAGATGATACAGGTGAAAGTGAAGTACAA CGTACTATGTTAGAACTTATTAATCAATTAGATGGATTTGATAAACGTGGAAATATTAAA GTCCTTATGGCAACAAATAGACCAGACACACTTGATCCAGCATTGGTTAGACCAGGACGA CTTGATAGAAAGATTGAATTTGGTCTTCCAGATATTGAAGGAAGAACAGAAATATTCAAA ATTCATACAAAGCCAATGAGTGTTGCAAAGGATATTCGTTATGATCTTTTAGCTAGATTA TGTCCAAATGCTACTGGAGCAGAAATTCAATCAGTTTGTACTGAGGCAGGAATGTTTGCA ATTAGAGCAAGAAGAAAAGTTGTTACTGAAAGAGATTTCTTAGACGCAATAGAAAAAGTT ATTAAAGGTTATCAAAAGTTCTCTGCAACTCCAAAATATCTTGCTTACAATTAA
  • Download Fasta

  • Fasta :-

    MEEEFEKKPKALDEEEIAILKAYNRGPYANSIKQLEKEVGDLATEIHNLVGIQESDTGLA PVSQWDLNADKKLMEEQPLLVCRCIKAMPDEREPRYVISIKEFARFVVGKSNRVEKNAVQ DGTRVGVDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYKDIGGCKEQIERIKEVVELPM LHPEAFENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAK MVRDLFDMAKSKKSCIIFFDEIDAIGGTRFQDDTGESEVQRTMLELINQLDGFDKRGNIK VLMATNRPDTLDPALVRPGRLDRKIEFGLPDIEGRTEIFKIHTKPMSVAKDIRYDLLARL CPNATGAEIQSVCTEAGMFAIRARRKVVTERDFLDAIEKVIKGYQKFSATPKYLAYN

  • title: ATP binding site
  • coordinates: P202,P203,G204,T205,G206,K207,T208,L209,D260,N306
No Results
No Results
No Results

EDI_096160      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India