EDI_111860 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008374      

  • Computed_GO_Functions:  O-acyltransferase activity      

  • Computed_GO_Process_IDs:  GO:0006629      

  • Computed_GO_Processes:  lipid metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_111860OTHER0.9990390.0006790.000282
No Results

  • Fasta :-

    >EDI_111860 MGGFVSYKLFDYLGKEFCDKYIQKWIAISAPFIGTGVVPKQMTVGENLGLPIKAEYARDL SRSIESVLALSPNEEKWNDDILVRIKSNGKTYTAKQLRELYKQIPELKDKTDFILDTEIT SLYKKWNWTIPNGVKMDCVYSHGKETPYSIEFNTDDLTKDYTVNYSDGDNLVNINSLESC KIFTDSVTNLGKHGHLLILNSNDIWNYIKPKVCGNYD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_111860.fa Sequence name : EDI_111860 Sequence length : 217 VALUES OF COMPUTED PARAMETERS Coef20 : 3.115 CoefTot : -0.536 ChDiff : -3 ZoneTo : 10 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.006 1.212 0.016 0.562 MesoH : -1.029 0.086 -0.491 0.156 MuHd_075 : 22.976 18.729 7.618 4.050 MuHd_095 : 35.163 21.084 10.055 6.694 MuHd_100 : 28.424 13.495 8.071 5.491 MuHd_105 : 23.010 8.478 5.771 4.636 Hmax_075 : 18.433 19.483 5.087 6.265 Hmax_095 : 18.025 15.838 3.594 5.810 Hmax_100 : 15.600 11.600 2.475 5.380 Hmax_105 : 14.467 8.517 1.646 5.623 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8212 0.1788 DFMC : 0.8581 0.1419
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 217 EDI_111860 MGGFVSYKLFDYLGKEFCDKYIQKWIAISAPFIGTGVVPKQMTVGENLGLPIKAEYARDLSRSIESVLALSPNEEKWNDD 80 ILVRIKSNGKTYTAKQLRELYKQIPELKDKTDFILDTEITSLYKKWNWTIPNGVKMDCVYSHGKETPYSIEFNTDDLTKD 160 YTVNYSDGDNLVNINSLESCKIFTDSVTNLGKHGHLLILNSNDIWNYIKPKVCGNYD 240 ................................................................................ 80 ................................................................................ 160 ......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_111860 8 GGFVSYK|LF 0.069 . EDI_111860 15 LFDYLGK|EF 0.063 . EDI_111860 20 GKEFCDK|YI 0.075 . EDI_111860 24 CDKYIQK|WI 0.070 . EDI_111860 40 GTGVVPK|QM 0.082 . EDI_111860 53 NLGLPIK|AE 0.058 . EDI_111860 58 IKAEYAR|DL 0.194 . EDI_111860 62 YARDLSR|SI 0.168 . EDI_111860 76 LSPNEEK|WN 0.070 . EDI_111860 84 NDDILVR|IK 0.086 . EDI_111860 86 DILVRIK|SN 0.082 . EDI_111860 90 RIKSNGK|TY 0.061 . EDI_111860 95 GKTYTAK|QL 0.075 . EDI_111860 98 YTAKQLR|EL 0.121 . EDI_111860 102 QLRELYK|QI 0.071 . EDI_111860 108 KQIPELK|DK 0.069 . EDI_111860 110 IPELKDK|TD 0.064 . EDI_111860 124 EITSLYK|KW 0.058 . EDI_111860 125 ITSLYKK|WN 0.141 . EDI_111860 135 TIPNGVK|MD 0.060 . EDI_111860 144 CVYSHGK|ET 0.060 . EDI_111860 159 NTDDLTK|DY 0.065 . EDI_111860 181 NSLESCK|IF 0.064 . EDI_111860 192 SVTNLGK|HG 0.058 . EDI_111860 209 DIWNYIK|PK 0.057 . EDI_111860 211 WNYIKPK|VC 0.073 . ____________________________^_________________

  • Fasta :-

    >EDI_111860 ATGGGTGGGTTTGTCTCTTACAAATTATTTGATTACCTTGGAAAAGAATTTTGTGATAAG TACATTCAAAAATGGATTGCAATTTCTGCTCCATTTATTGGAACAGGAGTAGTTCCAAAG CAAATGACAGTTGGAGAAAATTTAGGACTTCCAATTAAAGCAGAATATGCACGAGATCTT TCTAGATCAATTGAATCAGTGTTAGCGTTATCTCCAAATGAAGAAAAATGGAATGATGAT ATTCTTGTTAGAATTAAAAGTAATGGAAAAACTTATACTGCTAAACAACTGAGGGAGTTA TACAAACAAATTCCAGAATTAAAAGACAAAACTGATTTTATTTTAGATACTGAAATAACA TCATTATATAAGAAATGGAATTGGACTATTCCAAATGGAGTTAAAATGGATTGTGTTTAT TCTCATGGTAAAGAAACTCCTTATTCTATAGAATTTAATACTGATGATTTAACAAAAGAT TATACTGTTAATTATTCTGATGGTGATAATTTGGTTAATATTAATTCATTAGAATCATGT AAAATATTTACTGATTCTGTAACTAACCTTGGTAAACATGGGCATTTATTAATTTTAAAT TCTAATGATATTTGGAATTATATTAAACCTAAAGTATGTGGTAACTATGATTAA
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  • Fasta :-

    MGGFVSYKLFDYLGKEFCDKYIQKWIAISAPFIGTGVVPKQMTVGENLGLPIKAEYARDL SRSIESVLALSPNEEKWNDDILVRIKSNGKTYTAKQLRELYKQIPELKDKTDFILDTEIT SLYKKWNWTIPNGVKMDCVYSHGKETPYSIEFNTDDLTKDYTVNYSDGDNLVNINSLESC KIFTDSVTNLGKHGHLLILNSNDIWNYIKPKVCGNYD

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EDI_11186071 SVLALSPNEE0.995unsp

EDI_111860      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India