EDI_113060 | cysteine proteinase ACP1 precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_113060SP0.0576050.9416490.000746CS pos: 13-14. ANA-IT. Pr: 0.4618
No Results

  • Fasta :-

    >EDI_113060 MFAVILLGLCANAITFDQWQSKYKFKFSPVERLRRKAIFTSNFKYVKEFNKNHDFELSVE GPYAALTSEEYQALLNKQIIGNENKNIEVINLKSNKQVPASVDWRAEGKVTPIKDQGSCG SCFTFGAVAAIESRLLISGTTGYTAQTLIFLNNKFLIVLFLLMDDNPYTGKDGKCLYDKT KVKVSIEGLRTADISDTALTAAIADAPVGVCIDASQTSFQLYKSGVYDEPKCKKIMNHCV AAVGYGSQDGKDYYIVKNSWGTTWGMDGYILMSRNKNNQCGICTGISFPVGVKLI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_113060.fa Sequence name : EDI_113060 Sequence length : 295 VALUES OF COMPUTED PARAMETERS Coef20 : 4.295 CoefTot : -0.751 ChDiff : 6 ZoneTo : 47 KR : 9 DE : 2 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.488 2.041 0.268 0.684 MesoH : -0.222 0.492 -0.258 0.253 MuHd_075 : 32.287 18.954 9.262 7.024 MuHd_095 : 25.641 15.876 8.116 5.455 MuHd_100 : 23.576 14.267 5.178 6.376 MuHd_105 : 26.795 15.863 6.233 6.645 Hmax_075 : -7.000 9.567 -0.270 3.480 Hmax_095 : -0.700 2.100 -0.672 0.840 Hmax_100 : 5.200 7.500 -2.038 4.170 Hmax_105 : 3.617 6.600 -0.913 2.205 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8247 0.1753 DFMC : 0.7417 0.2583
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 295 EDI_113060 MFAVILLGLCANAITFDQWQSKYKFKFSPVERLRRKAIFTSNFKYVKEFNKNHDFELSVEGPYAALTSEEYQALLNKQII 80 GNENKNIEVINLKSNKQVPASVDWRAEGKVTPIKDQGSCGSCFTFGAVAAIESRLLISGTTGYTAQTLIFLNNKFLIVLF 160 LLMDDNPYTGKDGKCLYDKTKVKVSIEGLRTADISDTALTAAIADAPVGVCIDASQTSFQLYKSGVYDEPKCKKIMNHCV 240 AAVGYGSQDGKDYYIVKNSWGTTWGMDGYILMSRNKNNQCGICTGISFPVGVKLI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_113060 22 FDQWQSK|YK 0.074 . EDI_113060 24 QWQSKYK|FK 0.071 . EDI_113060 26 QSKYKFK|FS 0.078 . EDI_113060 32 KFSPVER|LR 0.114 . EDI_113060 34 SPVERLR|RK 0.076 . EDI_113060 35 PVERLRR|KA 0.266 . EDI_113060 36 VERLRRK|AI 0.099 . EDI_113060 44 IFTSNFK|YV 0.063 . EDI_113060 47 SNFKYVK|EF 0.064 . EDI_113060 51 YVKEFNK|NH 0.062 . EDI_113060 77 YQALLNK|QI 0.068 . EDI_113060 85 IIGNENK|NI 0.068 . EDI_113060 93 IEVINLK|SN 0.078 . EDI_113060 96 INLKSNK|QV 0.091 . EDI_113060 105 PASVDWR|AE 0.149 . EDI_113060 109 DWRAEGK|VT 0.066 . EDI_113060 114 GKVTPIK|DQ 0.086 . EDI_113060 134 VAAIESR|LL 0.086 . EDI_113060 154 LIFLNNK|FL 0.062 . EDI_113060 171 DNPYTGK|DG 0.060 . EDI_113060 174 YTGKDGK|CL 0.070 . EDI_113060 179 GKCLYDK|TK 0.058 . EDI_113060 181 CLYDKTK|VK 0.065 . EDI_113060 183 YDKTKVK|VS 0.072 . EDI_113060 190 VSIEGLR|TA 0.093 . EDI_113060 223 TSFQLYK|SG 0.076 . EDI_113060 231 GVYDEPK|CK 0.064 . EDI_113060 233 YDEPKCK|KI 0.063 . EDI_113060 234 DEPKCKK|IM 0.087 . EDI_113060 251 YGSQDGK|DY 0.086 . EDI_113060 257 KDYYIVK|NS 0.063 . EDI_113060 274 GYILMSR|NK 0.070 . EDI_113060 276 ILMSRNK|NN 0.066 . EDI_113060 293 SFPVGVK|LI 0.058 . ____________________________^_________________

  • Fasta :-

    >EDI_113060 ATGTTTGCAGTCATTCTGTTAGGACTGTGTGCAAATGCCATCACATTTGATCAATGGCAA TCTAAATACAAATTTAAATTCTCTCCTGTGGAAAGACTAAGAAGAAAAGCAATATTTACA AGTAATTTCAAATATGTTAAGGAATTTAATAAAAATCATGATTTTGAACTCTCTGTTGAA GGCCCATATGCTGCTTTAACTAGTGAAGAATATCAAGCACTTTTAAATAAACAAATTATT GGAAATGAAAATAAAAATATTGAAGTTATCAATTTAAAAAGTAATAAACAAGTTCCTGCT TCTGTTGATTGGAGGGCTGAAGGAAAAGTTACTCCAATTAAAGACCAAGGAAGTTGTGGA TCATGTTTTACTTTTGGTGCTGTTGCAGCAATTGAATCACGATTACTGATAAGTGGAACA ACTGGATATACTGCACAAACCTTGATCTTTCTGAACAACAAATTCTTGATTGTGCTATTC TTGCTAATGGATGATAATCCTTATACTGGCAAAGATGGAAAATGTTTATATGACAAGACA AAAGTAAAAGTTTCTATTGAAGGACTTCGAACTGCTGACATTAGTGATACTGCTCTTACT GCTGCGATTGCTGATGCTCCTGTTGGTGTTTGTATTGATGCTAGTCAAACATCTTTCCAA TTATATAAGTCAGGAGTTTATGATGAACCAAAATGCAAGAAAATAATGAACCATTGTGTT GCTGCTGTTGGATATGGATCTCAAGATGGTAAAGATTATTATATTGTAAAAAATTCATGG GGAACTACATGGGGAATGGATGGTTATATTTTAATGTCAAGAAATAAGAATAACCAATGT GGTATTTGCACAGGAATTTCATTCCCAGTTGGAGTAAAATTGATTTAA
  • Download Fasta

  • Fasta :-

    MFAVILLGLCANAITFDQWQSKYKFKFSPVERLRRKAIFTSNFKYVKEFNKNHDFELSVE GPYAALTSEEYQALLNKQIIGNENKNIEVINLKSNKQVPASVDWRAEGKVTPIKDQGSCG SCFTFGAVAAIESRLLISGTTGYTAQTLIFLNNKFLIVLFLLMDDNPYTGKDGKCLYDKT KVKVSIEGLRTADISDTALTAAIADAPVGVCIDASQTSFQLYKSGVYDEPKCKKIMNHCV AAVGYGSQDGKDYYIVKNSWGTTWGMDGYILMSRNKNNQCGICTGISFPVGVKLI

    No Results
  • title: active site
  • coordinates: Q116,C122,H238,N258
No Results
No Results
IDSitePeptideScoreMethod
EDI_113060185 SKVKVSIEGL0.996unsp

EDI_113060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India