EDI_114810 | chaperone Clpb, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0019538      

  • Computed_GO_Processes:  protein metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_114810OTHER0.9999910.0000040.000005
No Results

  • Fasta :-

    >EDI_114810 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL KKEIKETMNKIAVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKE ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYETLKK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_114810.fa Sequence name : EDI_114810 Sequence length : 162 VALUES OF COMPUTED PARAMETERS Coef20 : 3.362 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.218 1.100 -0.130 0.446 MesoH : -1.498 -0.086 -0.659 0.078 MuHd_075 : 6.948 6.747 1.353 0.987 MuHd_095 : 26.723 9.083 6.318 4.329 MuHd_100 : 34.762 11.217 8.878 5.193 MuHd_105 : 40.299 13.996 10.479 5.744 Hmax_075 : -8.633 -2.333 -5.726 0.050 Hmax_095 : -0.787 -2.538 -3.819 1.208 Hmax_100 : 11.800 -0.000 -1.048 2.490 Hmax_105 : 11.800 1.050 -0.202 2.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9412 0.0588 DFMC : 0.9278 0.0722
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 162 EDI_114810 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKLKKEIKETMNKIAVQNPPPVD 80 IGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKEISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYETL 160 KK 240 ................................................................................ 80 ................................................................................ 160 .. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_114810 5 --MDPNK|WT 0.079 . EDI_114810 15 ATVQMFK|ES 0.059 . EDI_114810 24 QEIAFER|KN 0.098 . EDI_114810 25 EIAFERK|NA 0.097 . EDI_114810 48 ESNIVIR|IV 0.202 . EDI_114810 59 MGGDVNK|LK 0.069 . EDI_114810 61 GDVNKLK|KE 0.069 . EDI_114810 62 DVNKLKK|EI 0.101 . EDI_114810 65 KLKKEIK|ET 0.071 . EDI_114810 70 IKETMNK|IA 0.065 . EDI_114810 92 TTQQVLR|RA 0.127 . EDI_114810 93 TQQVLRR|AI 0.348 . EDI_114810 97 LRRAIEK|QK 0.073 . EDI_114810 99 RAIEKQK|RM 0.071 . EDI_114810 100 AIEKQKR|MG 0.185 . EDI_114810 119 MSLMEEK|EI 0.076 . EDI_114810 133 NSGINVK|EF 0.068 . EDI_114810 137 NVKEFNK|KI 0.064 . EDI_114810 138 VKEFNKK|IT 0.116 . EDI_114810 143 KKITEMR|KG 0.096 . EDI_114810 144 KITEMRK|GQ 0.084 . EDI_114810 151 GQSVETK|EA 0.115 . EDI_114810 161 SQYETLK|K- 0.063 . EDI_114810 162 QYETLKK|-- 0.106 . ____________________________^_________________

  • Fasta :-

    >EDI_114810 ATGGACCCAAACAAATGGACAGACGCAACTGTTCAAATGTTCAAAGAATCACAAGAAATA GCATTTGAAAGAAAAAATGCATATATTATGCCAATTCATATGATGGAAGCAATTGTTGAA GAAGAATCAAATATTGTTATCCGAATAGTTGAAATGATGGGAGGTGATGTTAATAAATTA AAGAAAGAAATAAAAGAAACAATGAATAAAATTGCAGTTCAAAATCCACCACCAGTTGAT ATTGGACTTCATCCAACAACACAACAAGTATTAAGAAGAGCAATAGAGAAACAAAAAAGA ATGGGAGACTCATATCTTGCAATAGATGTAATTGTAATGTCATTAATGGAAGAGAAAGAA ATTAGTACAATAGTAGGAAATAGTGGAATTAATGTGAAAGAATTTAACAAAAAAATAACA GAAATGAGAAAAGGACAAAGTGTAGAAACAAAAGAAGCAGAAAGTCAATATGAAACATTA AAGAAATA
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  • Fasta :-

    MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL KKEIKETMNKIAVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKE ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYETLKK

    No Results
IDSitePositionGscoreIscore
EDI_114810T1590.5170.049
IDSitePositionGscoreIscore
EDI_114810T1590.5170.049
IDSitePeptideScoreMethod
EDI_114810155 SKEAESQYET0.998unsp

EDI_114810      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India