EDI_127290 | 1-O-acylceramide synthase precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008374      

  • Computed_GO_Functions:  O-acyltransferase activity      

  • Computed_GO_Process_IDs:  GO:0006629      

  • Computed_GO_Processes:  lipid metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_127290SP0.0026070.9972480.000145CS pos: 15-16. TQA-QS. Pr: 0.9087
No Results

  • Fasta :-

    >EDI_127290 MLVIVLLCIICSTQAQSCEKRKPILILSGILASQLMIDADIDTSIALPPQCPHKVKGQIW INRKDLIPFNNSACFVEYMKTYWNSSTRKMENIPGANIYYPDFPSTKGIFALAPDNQKLL QSKTKVFAAMIRDLKAAGWKDGIDLVSPGYDWRYADRSNNNWTEKTTQLIQQLVHDNGHK VVIVTHSFGGIAVLDLISSMSKEFCDQYIDKIITLNAPFIGSTKTLRTFLTGEDLGLKLD PLLLRPLARSWESDYQLMPNQRYWKNDNIVQVGNKKYSANNINAIIDLVEEVKEFGNIIY NSSINRHPLEYVPNNVTLHCLYSHGIETIVGIKYDSLDHDFQDVSYVYGDGDGVVDLQSL EWCKLPGFAKVVKDLGKGEHGTVISNTEVFGYIKNEACARDSNTKM
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_127290.fa Sequence name : EDI_127290 Sequence length : 406 VALUES OF COMPUTED PARAMETERS Coef20 : 4.571 CoefTot : 0.292 ChDiff : -3 ZoneTo : 37 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.535 1.971 0.468 0.709 MesoH : -0.511 0.528 -0.303 0.242 MuHd_075 : 16.827 14.567 6.128 5.987 MuHd_095 : 14.663 12.175 5.812 4.074 MuHd_100 : 15.529 12.712 7.696 3.535 MuHd_105 : 13.311 10.186 8.211 2.312 Hmax_075 : 14.000 17.800 6.244 3.350 Hmax_095 : 11.200 17.800 4.863 3.631 Hmax_100 : 11.500 18.500 5.465 3.050 Hmax_105 : 15.517 5.800 8.606 5.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8858 0.1142 DFMC : 0.8882 0.1118
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 406 EDI_127290 MLVIVLLCIICSTQAQSCEKRKPILILSGILASQLMIDADIDTSIALPPQCPHKVKGQIWINRKDLIPFNNSACFVEYMK 80 TYWNSSTRKMENIPGANIYYPDFPSTKGIFALAPDNQKLLQSKTKVFAAMIRDLKAAGWKDGIDLVSPGYDWRYADRSNN 160 NWTEKTTQLIQQLVHDNGHKVVIVTHSFGGIAVLDLISSMSKEFCDQYIDKIITLNAPFIGSTKTLRTFLTGEDLGLKLD 240 PLLLRPLARSWESDYQLMPNQRYWKNDNIVQVGNKKYSANNINAIIDLVEEVKEFGNIIYNSSINRHPLEYVPNNVTLHC 320 LYSHGIETIVGIKYDSLDHDFQDVSYVYGDGDGVVDLQSLEWCKLPGFAKVVKDLGKGEHGTVISNTEVFGYIKNEACAR 400 DSNTKM 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_127290 20 QAQSCEK|RK 0.057 . EDI_127290 21 AQSCEKR|KP 0.188 . EDI_127290 22 QSCEKRK|PI 0.084 . EDI_127290 54 PPQCPHK|VK 0.078 . EDI_127290 56 QCPHKVK|GQ 0.073 . EDI_127290 63 GQIWINR|KD 0.080 . EDI_127290 64 QIWINRK|DL 0.095 . EDI_127290 80 CFVEYMK|TY 0.054 . EDI_127290 88 YWNSSTR|KM 0.103 . EDI_127290 89 WNSSTRK|ME 0.091 . EDI_127290 107 PDFPSTK|GI 0.073 . EDI_127290 118 LAPDNQK|LL 0.057 . EDI_127290 123 QKLLQSK|TK 0.058 . EDI_127290 125 LLQSKTK|VF 0.075 . EDI_127290 132 VFAAMIR|DL 0.111 . EDI_127290 135 AMIRDLK|AA 0.148 . EDI_127290 140 LKAAGWK|DG 0.070 . EDI_127290 153 SPGYDWR|YA 0.169 . EDI_127290 157 DWRYADR|SN 0.107 . EDI_127290 165 NNNWTEK|TT 0.070 . EDI_127290 180 VHDNGHK|VV 0.061 . EDI_127290 202 LISSMSK|EF 0.071 . EDI_127290 211 CDQYIDK|II 0.064 . EDI_127290 224 PFIGSTK|TL 0.064 . EDI_127290 227 GSTKTLR|TF 0.095 . EDI_127290 238 GEDLGLK|LD 0.050 . EDI_127290 245 LDPLLLR|PL 0.073 . EDI_127290 249 LLRPLAR|SW 0.175 . EDI_127290 262 QLMPNQR|YW 0.086 . EDI_127290 265 PNQRYWK|ND 0.133 . EDI_127290 275 IVQVGNK|KY 0.064 . EDI_127290 276 VQVGNKK|YS 0.088 . EDI_127290 293 DLVEEVK|EF 0.067 . EDI_127290 306 YNSSINR|HP 0.085 . EDI_127290 333 ETIVGIK|YD 0.056 . EDI_127290 364 QSLEWCK|LP 0.060 . EDI_127290 370 KLPGFAK|VV 0.084 . EDI_127290 373 GFAKVVK|DL 0.154 . EDI_127290 377 VVKDLGK|GE 0.064 . EDI_127290 394 EVFGYIK|NE 0.055 . EDI_127290 400 KNEACAR|DS 0.121 . EDI_127290 405 ARDSNTK|M- 0.067 . ____________________________^_________________

  • Fasta :-

    >EDI_127290 ATGTTGGTCATAGTACTCTTATGTATTATTTGTTCTACTCAAGCACAATCTTGTGAAAAA AGAAAGCCTATTCTAATACTAAGTGGAATTTTAGCTTCACAATTAATGATTGATGCTGAT ATAGATACATCTATAGCATTACCTCCTCAATGTCCTCATAAAGTTAAAGGCCAAATTTGG ATTAACAGAAAAGACCTTATTCCTTTTAACAATTCTGCATGTTTTGTTGAGTATATGAAA ACGTATTGGAATTCTTCTACTAGAAAAATGGAAAACATTCCAGGGGCTAATATATATTAT CCAGACTTTCCATCTACAAAAGGAATTTTCGCTTTAGCACCAGATAACCAAAAACTTCTT CAATCAAAAACTAAAGTATTTGCTGCAATGATTCGTGATTTAAAAGCTGCAGGTTGGAAA GATGGCATTGATTTAGTTTCTCCTGGTTATGATTGGAGATATGCAGACAGAAGTAATAAT AATTGGACTGAAAAAACAACTCAATTAATTCAACAATTAGTGCACGATAATGGTCATAAA GTTGTTATTGTTACTCACAGTTTTGGTGGAATTGCTGTTTTAGATTTAATTAGTTCTATG TCAAAAGAATTTTGTGATCAATATATTGATAAAATTATCACTCTAAATGCTCCTTTCATT GGTTCAACAAAAACTTTACGAACATTTTTAACAGGAGAAGATTTAGGATTAAAGCTTGAT CCATTACTATTAAGACCATTAGCACGTTCATGGGAGTCTGACTACCAATTAATGCCTAAC CAAAGATATTGGAAAAATGATAATATTGTCCAAGTTGGAAATAAAAAATATTCTGCCAAC AATATCAATGCTATCATTGACCTTGTTGAGGAAGTAAAAGAATTTGGTAATATTATTTAT AACTCTAGCATTAATAGACATCCATTGGAATATGTTCCAAATAATGTTACATTACATTGT TTATATTCTCATGGCATTGAAACAATAGTTGGAATTAAATATGATTCTTTAGACCATGAC TTCCAAGATGTTAGTTACGTTTATGGCGATGGAGATGGAGTTGTGGATCTCCAATCTTTG GAATGGTGTAAACTTCCTGGATTTGCTAAAGTTGTAAAAGACTTAGGAAAAGGAGAACAT GGAACAGTAATTTCAAACACAGAAGTTTTTGGTTATATTAAGAATGAAGCATGTGCCAGA GATTCAAATACAAAAATGTGA
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  • Fasta :-

    MLVIVLLCIICSTQAQSCEKRKPILILSGILASQLMIDADIDTSIALPPQCPHKVKGQIW INRKDLIPFNNSACFVEYMKTYWNSSTRKMENIPGANIYYPDFPSTKGIFALAPDNQKLL QSKTKVFAAMIRDLKAAGWKDGIDLVSPGYDWRYADRSNNNWTEKTTQLIQQLVHDNGHK VVIVTHSFGGIAVLDLISSMSKEFCDQYIDKIITLNAPFIGSTKTLRTFLTGEDLGLKLD PLLLRPLARSWESDYQLMPNQRYWKNDNIVQVGNKKYSANNINAIIDLVEEVKEFGNIIY NSSINRHPLEYVPNNVTLHCLYSHGIETIVGIKYDSLDHDFQDVSYVYGDGDGVVDLQSL EWCKLPGFAKVVKDLGKGEHGTVISNTEVFGYIKNEACARDSNTKM

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
EDI_127290250 SPLARSWESD0.994unsp

EDI_127290      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India