EDI_129450 | minor histocompatibility antigen H13, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_129450OTHER0.9995070.0004530.000040
No Results

  • Fasta :-

    >EDI_129450 MDLKNAASMPVIGSLVLFGLYVIIKFISADYLQYLLTLYFMFIGAVGISELFSFIFEKYA SPEKLVISIPYINYKIETSKSEILGTGVGFIFSLIWAITHHWIFNNFLAFCLTIVAIGEL TAPSFKIAAIMLIALFCYDIFWVFGSEVMMTVATHVDGPIKFIFPKDGRFIFTEQVSILG LGDIAIPGIFIALMKRIDTSFNNKSQYFMVSMVSYFIGLLITFVIMHTFAHGQPALLYLV PALLIGTIFYAISRKELKQVYDYHDPTDEKEESSEEENEESSEEENEEKEEEKEENKED
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_129450.fa Sequence name : EDI_129450 Sequence length : 299 VALUES OF COMPUTED PARAMETERS Coef20 : 3.989 CoefTot : -0.884 ChDiff : -19 ZoneTo : 49 KR : 2 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.365 2.400 0.406 0.842 MesoH : 1.270 1.449 0.074 0.626 MuHd_075 : 26.566 20.577 7.144 5.551 MuHd_095 : 20.095 23.610 7.384 6.405 MuHd_100 : 17.695 19.554 6.531 5.888 MuHd_105 : 18.090 19.870 5.413 4.919 Hmax_075 : 12.775 26.017 2.298 6.207 Hmax_095 : 19.775 25.725 5.388 8.208 Hmax_100 : 19.700 25.600 5.388 8.280 Hmax_105 : 16.363 20.475 5.040 6.895 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9301 0.0699 DFMC : 0.9188 0.0812
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 299 EDI_129450 MDLKNAASMPVIGSLVLFGLYVIIKFISADYLQYLLTLYFMFIGAVGISELFSFIFEKYASPEKLVISIPYINYKIETSK 80 SEILGTGVGFIFSLIWAITHHWIFNNFLAFCLTIVAIGELTAPSFKIAAIMLIALFCYDIFWVFGSEVMMTVATHVDGPI 160 KFIFPKDGRFIFTEQVSILGLGDIAIPGIFIALMKRIDTSFNNKSQYFMVSMVSYFIGLLITFVIMHTFAHGQPALLYLV 240 PALLIGTIFYAISRKELKQVYDYHDPTDEKEESSEEENEESSEEENEEKEEEKEENKED 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_129450 4 ---MDLK|NA 0.059 . EDI_129450 25 GLYVIIK|FI 0.080 . EDI_129450 58 FSFIFEK|YA 0.085 . EDI_129450 64 KYASPEK|LV 0.065 . EDI_129450 75 IPYINYK|IE 0.061 . EDI_129450 80 YKIETSK|SE 0.076 . EDI_129450 126 LTAPSFK|IA 0.071 . EDI_129450 161 HVDGPIK|FI 0.073 . EDI_129450 166 IKFIFPK|DG 0.078 . EDI_129450 169 IFPKDGR|FI 0.111 . EDI_129450 195 IFIALMK|RI 0.072 . EDI_129450 196 FIALMKR|ID 0.112 . EDI_129450 204 DTSFNNK|SQ 0.081 . EDI_129450 254 IFYAISR|KE 0.070 . EDI_129450 255 FYAISRK|EL 0.101 . EDI_129450 258 ISRKELK|QV 0.088 . EDI_129450 270 HDPTDEK|EE 0.061 . EDI_129450 289 EEENEEK|EE 0.066 . EDI_129450 293 EEKEEEK|EE 0.060 . EDI_129450 297 EEKEENK|ED 0.057 . ____________________________^_________________

  • Fasta :-

    >EDI_129450 ATGGATTTAAAGAATGCGGCATCAATGCCAGTAATAGGAAGTCTTGTATTATTTGGATTA TACGTTATCATTAAATTCATTTCTGCGGACTATTTACAATATTTGTTAACACTTTATTTT ATGTTTATTGGGGCAGTTGGAATAAGTGAATTGTTTTCATTTATATTTGAGAAATATGCA TCTCCAGAGAAGTTAGTTATCAGTATCCCATACATTAATTATAAAATTGAAACATCTAAA TCAGAAATTCTTGGGACAGGAGTTGGATTTATATTTTCATTAATATGGGCTATTACTCAC CATTGGATCTTTAATAACTTCCTTGCATTTTGTTTAACAATTGTTGCTATTGGAGAACTT ACAGCACCATCATTTAAAATTGCGGCAATTATGTTAATTGCACTTTTCTGCTATGATATC TTTTGGGTATTTGGAAGTGAAGTTATGATGACAGTAGCAACTCATGTTGATGGACCAATC AAATTTATCTTCCCTAAGGATGGACGATTCATCTTCACAGAGCAAGTTTCAATTCTTGGA CTTGGTGATATTGCTATCCCAGGTATTTTTATTGCATTAATGAAAAGAATAGATACTTCT TTCAATAACAAGAGTCAATATTTCATGGTCTCTATGGTTTCATATTTCATTGGATTATTA ATTACATTTGTCATTATGCACACATTTGCACATGGACAACCAGCATTATTATATCTTGTA CCAGCATTATTAATTGGAACTATTTTCTATGCAATATCTAGAAAAGAATTAAAACAAGTA TATGATTATCATGATCCTACTGATGAGAAAGAAGAAAGTTCTGAAGAAGAAAATGAAGAA AGTTCTGAAGAAGAAAATGAAGAAAAAGAAGAAGAAAAAGAAGAAAATAAAGAAGATTAA
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  • Fasta :-

    MDLKNAASMPVIGSLVLFGLYVIIKFISADYLQYLLTLYFMFIGAVGISELFSFIFEKYA SPEKLVISIPYINYKIETSKSEILGTGVGFIFSLIWAITHHWIFNNFLAFCLTIVAIGEL TAPSFKIAAIMLIALFCYDIFWVFGSEVMMTVATHVDGPIKFIFPKDGRFIFTEQVSILG LGDIAIPGIFIALMKRIDTSFNNKSQYFMVSMVSYFIGLLITFVIMHTFAHGQPALLYLV PALLIGTIFYAISRKELKQVYDYHDPTDEKEESSEEENEESSEEENEEKEEEKEENKED

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_129450274 SKEESSEEEN0.998unspEDI_129450274 SKEESSEEEN0.998unspEDI_129450274 SKEESSEEEN0.998unspEDI_129450282 SNEESSEEEN0.998unspEDI_12945061 SEKYASPEKL0.996unspEDI_129450273 SEKEESSEEE0.995unsp

EDI_129450      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India