EDI_139430 | proliferation-associated protein 2G4, putative

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_IDPredictionOTHERSPmTPCS_Position
EDI_139430OTHER0.9999520.0000200.000028
No Results

  • Fasta :-

    >EDI_139430 MSTIHKPKKSAVSIEKKIATQQKKEQLKQENEIKKEENKVEEELESASDPRVIKHYEEAA EITNAAMKLAETLCVDGAIVYEVCKKVNEFIEEEAAKVFKNEYSYEKGIAFPCCISLNNC CGYFCPLAEDKTSMKKGDLAKIELATHISGFVAEACKSIVIGEEATGEKATIIEAGYTAL QEVISKLQVGVNTSDITTIVDGICKKYNVKAFENIVSRNMERYMIDGNKFILNVPSKSAV EDMKIELNDVWNLDIILTTGNAKPVEKETRTTVYKRNIDETYILKMRTSVQIFREVNNKY PTFPFSLGMLENESKAKMGIIEMAKHDLVDAYTVVYEKTGLVSQFKATIIVTENGPKVLT PIEAPAFIKKN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_139430.fa Sequence name : EDI_139430 Sequence length : 371 VALUES OF COMPUTED PARAMETERS Coef20 : 3.937 CoefTot : -0.354 ChDiff : -5 ZoneTo : 14 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.124 1.271 0.467 0.452 MesoH : -0.578 0.422 -0.292 0.241 MuHd_075 : 10.897 11.046 4.485 3.235 MuHd_095 : 21.764 14.986 8.844 5.845 MuHd_100 : 26.626 21.061 9.829 7.701 MuHd_105 : 26.997 21.811 8.937 7.815 Hmax_075 : -2.217 6.533 -2.789 2.473 Hmax_095 : 3.700 9.500 0.204 4.150 Hmax_100 : 12.500 12.200 2.527 4.710 Hmax_105 : 5.300 11.700 -0.131 4.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8780 0.1220 DFMC : 0.8777 0.1223
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 371 EDI_139430 MSTIHKPKKSAVSIEKKIATQQKKEQLKQENEIKKEENKVEEELESASDPRVIKHYEEAAEITNAAMKLAETLCVDGAIV 80 YEVCKKVNEFIEEEAAKVFKNEYSYEKGIAFPCCISLNNCCGYFCPLAEDKTSMKKGDLAKIELATHISGFVAEACKSIV 160 IGEEATGEKATIIEAGYTALQEVISKLQVGVNTSDITTIVDGICKKYNVKAFENIVSRNMERYMIDGNKFILNVPSKSAV 240 EDMKIELNDVWNLDIILTTGNAKPVEKETRTTVYKRNIDETYILKMRTSVQIFREVNNKYPTFPFSLGMLENESKAKMGI 320 IEMAKHDLVDAYTVVYEKTGLVSQFKATIIVTENGPKVLTPIEAPAFIKKN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_139430 6 -MSTIHK|PK 0.064 . EDI_139430 8 STIHKPK|KS 0.071 . EDI_139430 9 TIHKPKK|SA 0.320 . EDI_139430 16 SAVSIEK|KI 0.068 . EDI_139430 17 AVSIEKK|IA 0.171 . EDI_139430 23 KIATQQK|KE 0.066 . EDI_139430 24 IATQQKK|EQ 0.111 . EDI_139430 28 QKKEQLK|QE 0.067 . EDI_139430 34 KQENEIK|KE 0.066 . EDI_139430 35 QENEIKK|EE 0.122 . EDI_139430 39 IKKEENK|VE 0.064 . EDI_139430 51 ESASDPR|VI 0.115 . EDI_139430 54 SDPRVIK|HY 0.156 . EDI_139430 68 ITNAAMK|LA 0.071 . EDI_139430 85 IVYEVCK|KV 0.071 . EDI_139430 86 VYEVCKK|VN 0.092 . EDI_139430 97 IEEEAAK|VF 0.062 . EDI_139430 100 EAAKVFK|NE 0.071 . EDI_139430 107 NEYSYEK|GI 0.057 . EDI_139430 131 CPLAEDK|TS 0.064 . EDI_139430 135 EDKTSMK|KG 0.059 . EDI_139430 136 DKTSMKK|GD 0.082 . EDI_139430 141 KKGDLAK|IE 0.060 . EDI_139430 157 FVAEACK|SI 0.088 . EDI_139430 169 EEATGEK|AT 0.061 . EDI_139430 186 LQEVISK|LQ 0.057 . EDI_139430 205 IVDGICK|KY 0.055 . EDI_139430 206 VDGICKK|YN 0.104 . EDI_139430 210 CKKYNVK|AF 0.065 . EDI_139430 218 FENIVSR|NM 0.092 . EDI_139430 222 VSRNMER|YM 0.112 . EDI_139430 229 YMIDGNK|FI 0.064 . EDI_139430 237 ILNVPSK|SA 0.097 . EDI_139430 244 SAVEDMK|IE 0.058 . EDI_139430 263 LTTGNAK|PV 0.087 . EDI_139430 267 NAKPVEK|ET 0.064 . EDI_139430 270 PVEKETR|TT 0.086 . EDI_139430 275 TRTTVYK|RN 0.070 . EDI_139430 276 RTTVYKR|NI 0.192 . EDI_139430 285 DETYILK|MR 0.054 . EDI_139430 287 TYILKMR|TS 0.104 . EDI_139430 294 TSVQIFR|EV 0.151 . EDI_139430 299 FREVNNK|YP 0.060 . EDI_139430 315 MLENESK|AK 0.074 . EDI_139430 317 ENESKAK|MG 0.070 . EDI_139430 325 GIIEMAK|HD 0.058 . EDI_139430 338 YTVVYEK|TG 0.053 . EDI_139430 346 GLVSQFK|AT 0.073 . EDI_139430 357 VTENGPK|VL 0.061 . EDI_139430 369 EAPAFIK|KN 0.062 . EDI_139430 370 APAFIKK|N- 0.114 . ____________________________^_________________

  • Fasta :-

    >EDI_139430 ATGAGCACCATTCATAAACCAAAGAAGTCTGCTGTTTCAATTGAAAAGAAAATTGCTACC CAACAAAAGAAAGAACAATTAAAACAAGAAAATGAAATTAAAAAAGAAGAAAATAAAGTA GAAGAAGAACTTGAATCTGCTAGTGATCCAAGAGTTATTAAACATTATGAAGAAGCAGCA GAAATTACTAATGCAGCAATGAAACTTGCTGAAACACTTTGTGTTGATGGAGCAATTGTT TATGAAGTATGTAAAAAAGTTAATGAATTTATTGAAGAAGAAGCAGCTAAAGTTTTTAAG AATGAATATTCATATGAGAAAGGAATTGCATTTCCATGTTGTATTTCATTAAATAATTGT TGTGGATATTTCTGTCCATTAGCTGAAGATAAAACTAGTATGAAAAAAGGAGATTTAGCT AAAATTGAATTAGCAACACATATTTCAGGATTTGTTGCAGAAGCATGTAAAAGTATTGTA ATTGGAGAAGAAGCAACAGGAGAAAAAGCAACTATTATTGAAGCAGGATATACTGCACTT CAAGAAGTTATTTCAAAACTTCAAGTAGGAGTTAATACATCAGATATTACAACAATTGTT GATGGAATTTGTAAGAAATATAATGTTAAAGCATTTGAAAATATTGTTTCAAGAAATATG GAAAGATATATGATTGATGGAAATAAATTTATTCTTAATGTTCCATCTAAATCAGCTGTT GAAGATATGAAAATTGAATTAAATGATGTTTGGAATTTAGATATTATTTTAACTACTGGA AATGCTAAGCCAGTAGAAAAAGAAACTAGAACTACAGTTTATAAAAGAAATATTGATGAA ACATATATTCTTAAAATGAGAACATCTGTTCAAATTTTTAGAGAAGTTAATAATAAATAT CCAACATTCCCATTCTCTCTTGGAATGCTTGAAAATGAATCTAAAGCTAAAATGGGAATT ATTGAAATGGCAAAACACGATTTAGTTGATGCTTATACTGTTGTTTATGAAAAGACTGGA TTAGTATCTCAATTTAAAGCAACAATTATTGTTACTGAAAATGGTCCAAAAGTATTAACT CCAATTGAAGCTCCAGCTTTCATTAAGAAGAACTGA
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  • Fasta :-

    MSTIHKPKKSAVSIEKKIATQQKKEQLKQENEIKKEENKVEEELESASDPRVIKHYEEAA EITNAAMKLAETLCVDGAIVYEVCKKVNEFIEEEAAKVFKNEYSYEKGIAFPCCISLNNC CGYFCPLAEDKTSMKKGDLAKIELATHISGFVAEACKSIVIGEEATGEKATIIEAGYTAL QEVISKLQVGVNTSDITTIVDGICKKYNVKAFENIVSRNMERYMIDGNKFILNVPSKSAV EDMKIELNDVWNLDIILTTGNAKPVEKETRTTVYKRNIDETYILKMRTSVQIFREVNNKY PTFPFSLGMLENESKAKMGIIEMAKHDLVDAYTVVYEKTGLVSQFKATIIVTENGPKVLT PIEAPAFIKKN

  • title: active site
  • coordinates: Y123,E143,E154,E313,D330,K346
IDSitePositionGscoreIscore
EDI_139430T30.5070.035
IDSitePositionGscoreIscore
EDI_139430T30.5070.035
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_139430133 SEDKTSMKKG0.997unspEDI_139430133 SEDKTSMKKG0.997unspEDI_139430133 SEDKTSMKKG0.997unspEDI_13943013 SKSAVSIEKK0.992unspEDI_13943046 SEELESASDP0.995unsp

EDI_139430      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India