EDI_144390 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_144390SP0.1217960.8448060.033398CS pos: 13-14. SYA-KL. Pr: 0.4215
No Results

  • Fasta :-

    >EDI_144390 MLLLALCVICSYAKLSLNQKVMQRISQSFMTLELNEVESMTYTVPLDHFNANNQNDFDIH YFVNKEFLDTNDPNAPLFVLLGGEGPASPKVLQNNYVIDSLAKKHKGLMLSVEHRFYGAS TPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVIVLGGSYSGNLAAWMRQKYPN VVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEKWDEMTTTEEGRKELGKI FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKSSYESTDSICTEINEDVVNKYPLFI KEKYNPEWGDKECTSSSQEESYKTLQSTSTYAEGNEGAAGRSWFFQTCIAYGYYQAVSEQ SSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRYGGKKPCVTNVAFTNGNTDPW HALGVTESDHQEGNLVQLIDRTSHCSDLYSEKETDVPELKKARHNELKFIAQVLANVPQN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_144390.fa Sequence name : EDI_144390 Sequence length : 480 VALUES OF COMPUTED PARAMETERS Coef20 : 4.555 CoefTot : 0.737 ChDiff : -26 ZoneTo : 32 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.459 2.071 0.358 0.586 MesoH : -0.485 0.228 -0.407 0.249 MuHd_075 : 34.804 22.428 9.916 7.262 MuHd_095 : 29.006 24.860 8.564 7.942 MuHd_100 : 28.907 24.258 8.268 8.047 MuHd_105 : 29.501 20.596 7.446 7.203 Hmax_075 : 14.600 12.500 2.130 2.690 Hmax_095 : 13.600 17.500 1.513 5.760 Hmax_100 : 13.600 17.500 1.513 5.760 Hmax_105 : 11.400 14.612 1.220 4.883 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4437 0.5563 DFMC : 0.5160 0.4840
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 480 EDI_144390 MLLLALCVICSYAKLSLNQKVMQRISQSFMTLELNEVESMTYTVPLDHFNANNQNDFDIHYFVNKEFLDTNDPNAPLFVL 80 LGGEGPASPKVLQNNYVIDSLAKKHKGLMLSVEHRFYGASTPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVI 160 VLGGSYSGNLAAWMRQKYPNVVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEKWDEMTTTEEGRKELGKI 240 FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKSSYESTDSICTEINEDVVNKYPLFIKEKYNPEWGDKECTSSSQEE 320 SYKTLQSTSTYAEGNEGAAGRSWFFQTCIAYGYYQAVSEQSSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRY 400 GGKKPCVTNVAFTNGNTDPWHALGVTESDHQEGNLVQLIDRTSHCSDLYSEKETDVPELKKARHNELKFIAQVLANVPQN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_144390 14 VICSYAK|LS 0.057 . EDI_144390 20 KLSLNQK|VM 0.061 . EDI_144390 24 NQKVMQR|IS 0.078 . EDI_144390 65 IHYFVNK|EF 0.061 . EDI_144390 90 EGPASPK|VL 0.057 . EDI_144390 103 VIDSLAK|KH 0.056 . EDI_144390 104 IDSLAKK|HK 0.136 . EDI_144390 106 SLAKKHK|GL 0.091 . EDI_144390 115 MLSVEHR|FY 0.231 . EDI_144390 128 PSLEMDK|LI 0.057 . EDI_144390 175 NLAAWMR|QK 0.098 . EDI_144390 177 AAWMRQK|YP 0.079 . EDI_144390 211 VQNALPK|NT 0.072 . EDI_144390 223 LSFAFEK|WD 0.067 . EDI_144390 234 TTTEEGR|KE 0.079 . EDI_144390 235 TTEEGRK|EL 0.108 . EDI_144390 239 GRKELGK|IF 0.075 . EDI_144390 250 CTEFGEK|DI 0.064 . EDI_144390 275 YNSSNWK|SS 0.106 . EDI_144390 295 NEDVVNK|YP 0.058 . EDI_144390 301 KYPLFIK|EK 0.058 . EDI_144390 303 PLFIKEK|YN 0.068 . EDI_144390 311 NPEWGDK|EC 0.057 . EDI_144390 323 SQEESYK|TL 0.062 . EDI_144390 341 NEGAAGR|SW 0.159 . EDI_144390 364 SEQSSVK|WG 0.061 . EDI_144390 367 SSVKWGK|LN 0.069 . EDI_144390 379 GSIDMCK|DI 0.087 . EDI_144390 386 DIYGIDK|DT 0.064 . EDI_144390 399 VDHINVR|YG 0.110 . EDI_144390 403 NVRYGGK|KP 0.059 . EDI_144390 404 VRYGGKK|PC 0.091 . EDI_144390 441 LVQLIDR|TS 0.075 . EDI_144390 452 SDLYSEK|ET 0.065 . EDI_144390 460 TDVPELK|KA 0.069 . EDI_144390 461 DVPELKK|AR 0.085 . EDI_144390 463 PELKKAR|HN 0.103 . EDI_144390 468 ARHNELK|FI 0.112 . ____________________________^_________________

  • Fasta :-

    >EDI_144390 ATGTTACTTCTTGCTTTATGTGTTATTTGCAGTTATGCAAAACTTTCACTCAACCAAAAA GTAATGCAACGGATATCTCAATCATTCATGACATTAGAATTAAATGAGGTTGAATCAATG ACTTATACTGTCCCATTGGACCATTTCAACGCTAATAATCAGAATGATTTTGATATTCAC TACTTTGTTAATAAAGAGTTTCTTGATACTAATGACCCAAATGCACCACTCTTTGTTTTA TTAGGAGGTGAAGGACCTGCTTCTCCTAAAGTATTACAAAATAATTACGTTATTGACTCA TTGGCTAAAAAACACAAAGGATTAATGTTATCTGTTGAACATCGTTTTTATGGTGCTTCA ACTCCATCACTTGAAATGGATAAATTAATTTATTGTACTGCAGAACAAGCATTAATGGAT TATGTTGAAGTTATTTCACATGTTCAAGAAGAAAATAATTTAGTTGGACATCCAGTTATT GTTCTTGGTGGATCATATAGTGGTAATTTAGCTGCTTGGATGAGACAAAAATATCCTAAT GTTGTAGAAGGGGCATGGGCATCATCTGCTCCAGTAGAAGCTGTAGTTGATTTTTATCAA TATCTTGAAGTTGTACAAAATGCACTTCCTAAAAACACTGCAGATTTATTATCATTTGCA TTTGAAAAATGGGATGAAATGACTACTACTGAAGAAGGAAGAAAAGAATTAGGAAAGATT TTCAATACTTGTACTGAATTTGGTGAAAAAGATATTCAAACATTTGCAGAATCTATTGGA ACAGCTCTTTCTGGTTATGTTCAGTATAATTCTTCAAATTGGAAATCTTCATATGAAAGT ACTGATTCAATTTGTACTGAAATTAATGAAGATGTTGTTAATAAATACCCATTATTTATT AAAGAGAAATATAATCCAGAATGGGGTGATAAAGAATGTACTTCATCTTCTCAAGAAGAA AGTTATAAAACATTACAAAGTACTTCTACTTATGCTGAAGGAAATGAAGGTGCTGCTGGT AGATCATGGTTTTTCCAAACATGTATTGCTTATGGATATTATCAAGCTGTTAGTGAACAG TCATCAGTCAAATGGGGTAAATTAAATCAACTTCAAGGAAGTATTGATATGTGTAAAGAT ATTTATGGTATTGATAAAGATACTTTATATAATGCAGTTGATCATATCAATGTTAGATAT GGAGGAAAGAAACCATGTGTAACTAATGTTGCTTTTACTAATGGTAACACTGATCCTTGG CACGCTCTTGGAGTTACTGAATCTGACCATCAAGAAGGTAATTTAGTACAATTAATCGAC AGAACATCTCATTGTTCTGATCTTTATTCAGAAAAAGAGACTGATGTTCCAGAATTAAAG AAAGCAAGACACAATGAACTTAAATTCATTGCTCAAGTCCTTGCTAATGTCCCTCAAAAT TAA
  • Download Fasta

  • Fasta :-

    MLLLALCVICSYAKLSLNQKVMQRISQSFMTLELNEVESMTYTVPLDHFNANNQNDFDIH YFVNKEFLDTNDPNAPLFVLLGGEGPASPKVLQNNYVIDSLAKKHKGLMLSVEHRFYGAS TPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVIVLGGSYSGNLAAWMRQKYPN VVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEKWDEMTTTEEGRKELGKI FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKSSYESTDSICTEINEDVVNKYPLFI KEKYNPEWGDKECTSSSQEESYKTLQSTSTYAEGNEGAAGRSWFFQTCIAYGYYQAVSEQ SSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRYGGKKPCVTNVAFTNGNTDPW HALGVTESDHQEGNLVQLIDRTSHCSDLYSEKETDVPELKKARHNELKFIAQVLANVPQN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_144390317 SCTSSSQEES0.996unspEDI_144390317 SCTSSSQEES0.996unspEDI_144390317 SCTSSSQEES0.996unspEDI_144390362 SSEQSSVKWG0.995unspEDI_144390450 SSDLYSEKET0.996unspEDI_14439088 SEGPASPKVL0.99unspEDI_144390277 SNWKSSYEST0.996unsp

EDI_144390      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India