EDI_144600 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_144600OTHER0.9991230.0007530.000125
No Results

  • Fasta :-

    >EDI_144600 MGNSITSKYAFLPPQNKYPINAFEICHINNRHVPYYIINSEPPSNRYIIFSHGNAEDIST SIECMRRFSKIVQCNIIGYDYTGYGSNIGDPSENNCNQDILSIFLMVVKDMNIPQKNIAL MGHSIGCGPSLWLANQIQLNKLKKYNIQPGVLGSVLSISGFTSACAVVDQRLTYIPFTDI FNNENTIRELKMPVFIAHGLNDTIIHVSHATRLSEAIKCKDNFELYLVEDCGHNDIFSNI EFQTAIVSFIESYFQNHLIN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_144600.fa Sequence name : EDI_144600 Sequence length : 260 VALUES OF COMPUTED PARAMETERS Coef20 : 3.255 CoefTot : -4.064 ChDiff : -5 ZoneTo : 55 KR : 4 DE : 2 CleavSite : 56 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.824 1.700 0.406 0.581 MesoH : -0.038 0.529 -0.259 0.283 MuHd_075 : 39.343 25.124 10.218 9.064 MuHd_095 : 29.149 21.170 9.487 6.987 MuHd_100 : 30.829 21.685 9.028 7.057 MuHd_105 : 31.859 15.467 9.634 5.363 Hmax_075 : 10.800 15.050 2.346 5.800 Hmax_095 : 4.900 9.100 2.384 3.900 Hmax_100 : 8.600 9.000 0.940 4.060 Hmax_105 : 7.467 10.383 1.734 3.885 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9428 0.0572 DFMC : 0.9402 0.0598
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 260 EDI_144600 MGNSITSKYAFLPPQNKYPINAFEICHINNRHVPYYIINSEPPSNRYIIFSHGNAEDISTSIECMRRFSKIVQCNIIGYD 80 YTGYGSNIGDPSENNCNQDILSIFLMVVKDMNIPQKNIALMGHSIGCGPSLWLANQIQLNKLKKYNIQPGVLGSVLSISG 160 FTSACAVVDQRLTYIPFTDIFNNENTIRELKMPVFIAHGLNDTIIHVSHATRLSEAIKCKDNFELYLVEDCGHNDIFSNI 240 EFQTAIVSFIESYFQNHLIN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_144600 8 GNSITSK|YA 0.081 . EDI_144600 17 FLPPQNK|YP 0.061 . EDI_144600 31 ICHINNR|HV 0.113 . EDI_144600 46 SEPPSNR|YI 0.106 . EDI_144600 66 TSIECMR|RF 0.116 . EDI_144600 67 SIECMRR|FS 0.156 . EDI_144600 70 CMRRFSK|IV 0.186 . EDI_144600 109 IFLMVVK|DM 0.064 . EDI_144600 116 DMNIPQK|NI 0.077 . EDI_144600 141 NQIQLNK|LK 0.052 . EDI_144600 143 IQLNKLK|KY 0.068 . EDI_144600 144 QLNKLKK|YN 0.130 . EDI_144600 171 CAVVDQR|LT 0.078 . EDI_144600 188 NNENTIR|EL 0.081 . EDI_144600 191 NTIRELK|MP 0.096 . EDI_144600 212 HVSHATR|LS 0.106 . EDI_144600 218 RLSEAIK|CK 0.078 . EDI_144600 220 SEAIKCK|DN 0.083 . ____________________________^_________________

  • Fasta :-

    >EDI_144600 ATGGGCAACAGCATCACTAGTAAGTATGCTTTTCTTCCTCCTCAAAACAAATATCCTATT AATGCATTTGAAATTTGCCATATTAATAATAGACATGTTCCTTATTACATTATAAATTCA GAACCTCCAAGTAATAGGTATATTATATTTTCACATGGAAATGCTGAAGATATTTCTACT TCTATAGAATGTATGAGAAGATTTTCTAAAATTGTTCAATGCAATATCATTGGTTATGAC TATACTGGTTATGGAAGTAATATTGGTGATCCTTCAGAAAATAATTGTAATCAAGACATT TTATCGATTTTTCTTATGGTTGTGAAAGATATGAATATACCACAAAAAAATATTGCTCTT ATGGGTCATTCTATAGGATGTGGACCATCGTTATGGCTAGCAAATCAAATTCAATTGAAT AAATTAAAAAAATATAATATTCAACCAGGTGTTCTTGGAAGTGTATTATCTATAAGTGGA TTTACTTCTGCTTGTGCTGTTGTTGATCAAAGATTAACATATATTCCATTTACTGATATT TTCAATAATGAGAATACAATTAGAGAATTAAAAATGCCAGTATTTATTGCCCATGGTTTA AATGATACAATTATCCATGTCTCACATGCCACCCGGTTAAGTGAAGCAATTAAATGTAAA GATAATTTTGAATTATATTTAGTAGAAGATTGTGGGCATAATGACATATTTAGTAATATA GAATTTCAAACAGCAATAGTATCATTTATAGAAAGTTATTTTCAAAACCATCTTATTAAT TAA
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  • Fasta :-

    MGNSITSKYAFLPPQNKYPINAFEICHINNRHVPYYIINSEPPSNRYIIFSHGNAEDIST SIECMRRFSKIVQCNIIGYDYTGYGSNIGDPSENNCNQDILSIFLMVVKDMNIPQKNIAL MGHSIGCGPSLWLANQIQLNKLKKYNIQPGVLGSVLSISGFTSACAVVDQRLTYIPFTDI FNNENTIRELKMPVFIAHGLNDTIIHVSHATRLSEAIKCKDNFELYLVEDCGHNDIFSNI EFQTAIVSFIESYFQNHLIN

    No Results
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EDI_144600      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India