EDI_150800 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0008270      

  • Computed_GO_Functions:  aminopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_150800OTHER0.9998920.0000890.000019
No Results

  • Fasta :-

    >EDI_150800 MEEDFLTFLENCSGSAFNAVEHIKQLFLDNNFQLLKENNLWTLEKGKKYFIIRDDATVFA FAIGGKYEIGNGFTIAGAHLDSPSLKLKPNPFKESEELNLISCETYGGGVWTTWFDRDLG ICGRVVVEEEGQFKSIPIAIKEPLYRIATCAPHLDKRYPKGFIIDKETELPAIGLSEKEL LELIQERIGNKSIVTYDLYLCDVQKPSLLGMNKEFVVGQGLDNLICSYGAIYGMIRSSKD GLLEENCNILMSCIYDDEEIGSTNRRGANSVMLPNIMKRIVYCFNDGKGIEERIQIGESK SIVLSTDVGHATHPNYPDRTDDKHPVYMNHGLVIETNCNQQLLGDSNVFAIISKLGKEVG VEFQRTVKRQEKGGGGSTIGPKIASHTGLNVIDFGIPLLSMHSIREIGGISDVDSMTRLV AEVMKSFWKYQNSLN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_150800.fa Sequence name : EDI_150800 Sequence length : 435 VALUES OF COMPUTED PARAMETERS Coef20 : 3.772 CoefTot : 0.000 ChDiff : -13 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.788 1.153 0.059 0.541 MesoH : -0.719 0.241 -0.373 0.204 MuHd_075 : 7.696 4.433 1.512 0.914 MuHd_095 : 32.264 24.378 9.722 6.332 MuHd_100 : 27.149 21.813 8.666 5.224 MuHd_105 : 17.563 15.877 6.393 3.254 Hmax_075 : 3.850 4.462 -1.097 2.917 Hmax_095 : 18.812 15.400 3.495 5.311 Hmax_100 : 17.800 14.800 3.567 4.870 Hmax_105 : 8.000 13.067 1.521 4.165 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8896 0.1104 DFMC : 0.9287 0.0713
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 435 EDI_150800 MEEDFLTFLENCSGSAFNAVEHIKQLFLDNNFQLLKENNLWTLEKGKKYFIIRDDATVFAFAIGGKYEIGNGFTIAGAHL 80 DSPSLKLKPNPFKESEELNLISCETYGGGVWTTWFDRDLGICGRVVVEEEGQFKSIPIAIKEPLYRIATCAPHLDKRYPK 160 GFIIDKETELPAIGLSEKELLELIQERIGNKSIVTYDLYLCDVQKPSLLGMNKEFVVGQGLDNLICSYGAIYGMIRSSKD 240 GLLEENCNILMSCIYDDEEIGSTNRRGANSVMLPNIMKRIVYCFNDGKGIEERIQIGESKSIVLSTDVGHATHPNYPDRT 320 DDKHPVYMNHGLVIETNCNQQLLGDSNVFAIISKLGKEVGVEFQRTVKRQEKGGGGSTIGPKIASHTGLNVIDFGIPLLS 400 MHSIREIGGISDVDSMTRLVAEVMKSFWKYQNSLN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_150800 24 NAVEHIK|QL 0.065 . EDI_150800 36 NNFQLLK|EN 0.054 . EDI_150800 45 NLWTLEK|GK 0.058 . EDI_150800 47 WTLEKGK|KY 0.069 . EDI_150800 48 TLEKGKK|YF 0.100 . EDI_150800 53 KKYFIIR|DD 0.120 . EDI_150800 66 AFAIGGK|YE 0.067 . EDI_150800 86 LDSPSLK|LK 0.067 . EDI_150800 88 SPSLKLK|PN 0.079 . EDI_150800 93 LKPNPFK|ES 0.064 . EDI_150800 117 WTTWFDR|DL 0.137 . EDI_150800 124 DLGICGR|VV 0.116 . EDI_150800 134 EEEGQFK|SI 0.084 . EDI_150800 141 SIPIAIK|EP 0.055 . EDI_150800 146 IKEPLYR|IA 0.110 . EDI_150800 156 CAPHLDK|RY 0.057 . EDI_150800 157 APHLDKR|YP 0.184 . EDI_150800 160 LDKRYPK|GF 0.159 . EDI_150800 166 KGFIIDK|ET 0.058 . EDI_150800 178 AIGLSEK|EL 0.057 . EDI_150800 187 LELIQER|IG 0.094 . EDI_150800 191 QERIGNK|SI 0.075 . EDI_150800 205 YLCDVQK|PS 0.061 . EDI_150800 213 SLLGMNK|EF 0.058 . EDI_150800 236 AIYGMIR|SS 0.134 . EDI_150800 239 GMIRSSK|DG 0.150 . EDI_150800 265 EIGSTNR|RG 0.066 . EDI_150800 266 IGSTNRR|GA 0.203 . EDI_150800 278 MLPNIMK|RI 0.061 . EDI_150800 279 LPNIMKR|IV 0.319 . EDI_150800 288 YCFNDGK|GI 0.069 . EDI_150800 293 GKGIEER|IQ 0.091 . EDI_150800 300 IQIGESK|SI 0.080 . EDI_150800 319 HPNYPDR|TD 0.136 . EDI_150800 323 PDRTDDK|HP 0.062 . EDI_150800 354 VFAIISK|LG 0.059 . EDI_150800 357 IISKLGK|EV 0.111 . EDI_150800 365 VGVEFQR|TV 0.117 . EDI_150800 368 EFQRTVK|RQ 0.129 . EDI_150800 369 FQRTVKR|QE 0.243 . EDI_150800 372 TVKRQEK|GG 0.185 . EDI_150800 382 GSTIGPK|IA 0.073 . EDI_150800 405 LSMHSIR|EI 0.154 . EDI_150800 418 DVDSMTR|LV 0.099 . EDI_150800 425 LVAEVMK|SF 0.103 . EDI_150800 429 VMKSFWK|YQ 0.061 . ____________________________^_________________

  • Fasta :-

    >EDI_150800 ATGGAAGAAGACTTTCTTACATTTTTAGAAAATTGTTCTGGATCTGCCTTTAACGCTGTT GAACATATTAAACAACTCTTCTTAGATAATAATTTCCAATTATTAAAAGAAAATAATTTA TGGACTTTAGAAAAAGGAAAAAAGTATTTTATTATTAGAGACGACGCAACTGTCTTTGCT TTCGCAATTGGAGGGAAATACGAAATTGGAAATGGGTTTACTATTGCTGGTGCACATTTA GATAGTCCATCATTAAAATTAAAACCAAATCCTTTCAAAGAATCAGAAGAGTTAAATTTA ATTTCATGTGAAACTTATGGTGGAGGAGTATGGACTACTTGGTTTGATCGTGATTTAGGA ATTTGTGGAAGGGTTGTTGTAGAAGAAGAAGGGCAATTTAAAAGTATTCCTATTGCTATT AAAGAACCTTTGTATAGAATTGCTACATGTGCACCACATTTAGATAAAAGATATCCAAAA GGATTTATTATTGATAAAGAAACAGAGTTACCTGCTATTGGATTAAGTGAGAAAGAATTA CTAGAATTAATTCAAGAACGAATTGGAAATAAATCAATTGTAACATATGACTTATATCTT TGTGATGTACAAAAACCAAGTTTATTAGGAATGAATAAAGAATTTGTTGTTGGACAAGGC CTTGATAATTTGATTTGTTCATATGGAGCAATTTATGGAATGATTAGATCAAGTAAAGAT GGGTTATTAGAAGAAAATTGTAATATTCTTATGAGTTGTATTTATGATGATGAAGAAATA GGTTCAACAAATAGAAGAGGAGCAAATTCAGTGATGTTACCAAATATAATGAAACGTATA GTTTATTGTTTTAACGATGGAAAAGGAATAGAAGAAAGAATTCAAATCGGAGAAAGTAAA TCTATTGTTTTAAGTACTGATGTTGGTCATGCAACGCATCCAAATTATCCAGATAGAACT GATGATAAACATCCAGTTTATATGAATCATGGATTAGTTATTGAAACTAATTGTAATCAA CAATTACTTGGTGATTCTAATGTTTTTGCAATTATATCAAAATTAGGAAAAGAAGTTGGA GTAGAATTTCAAAGAACTGTTAAACGACAAGAAAAAGGAGGAGGAGGAAGTACTATTGGT CCAAAAATTGCATCACATACAGGTTTAAATGTTATTGATTTTGGAATTCCATTATTATCC ATGCATTCAATAAGAGAAATTGGAGGTATTTCTGATGTTGATTCTATGACTAGACTTGTT GCTGAAGTAATGAAATCTTTTTGGAAGTATCAAAATTCTTTAAATTAA
  • Download Fasta

  • Fasta :-

    MEEDFLTFLENCSGSAFNAVEHIKQLFLDNNFQLLKENNLWTLEKGKKYFIIRDDATVFA FAIGGKYEIGNGFTIAGAHLDSPSLKLKPNPFKESEELNLISCETYGGGVWTTWFDRDLG ICGRVVVEEEGQFKSIPIAIKEPLYRIATCAPHLDKRYPKGFIIDKETELPAIGLSEKEL LELIQERIGNKSIVTYDLYLCDVQKPSLLGMNKEFVVGQGLDNLICSYGAIYGMIRSSKD GLLEENCNILMSCIYDDEEIGSTNRRGANSVMLPNIMKRIVYCFNDGKGIEERIQIGESK SIVLSTDVGHATHPNYPDRTDDKHPVYMNHGLVIETNCNQQLLGDSNVFAIISKLGKEVG VEFQRTVKRQEKGGGGSTIGPKIASHTGLNVIDFGIPLLSMHSIREIGGISDVDSMTRLV AEVMKSFWKYQNSLN

  • title: metal binding site
  • coordinates: H79,D222,E258,E259,D307,H402
No Results
No Results
No Results

EDI_150800      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India