EDI_158830 | hypothetical protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
EDI_158830OTHER0.9773070.0224860.000207
No Results

  • Fasta :-

    >EDI_158830 METGLLGHAEQKAPTSLQKCILGLVALLIIFQAFVLIFIFTSGYVTLDNYQLSAQNIMDK AVQDVDEGLTQPTLPKSFVTPYQLPRYCQYNRGTCWALATIGLLEQSYRDNGIRKGFLKD NEYLRLSPQAYAIDVLNQCALHPEACPGKEGINNSTEGGYVEWLYAFTDLYDKVLPESAC PYAEENEGQWECADKEKKQASNPIKFNVTSITTKRNIY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_158830.fa Sequence name : EDI_158830 Sequence length : 218 VALUES OF COMPUTED PARAMETERS Coef20 : 3.233 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.512 3.112 0.530 1.023 MesoH : -0.048 0.618 -0.239 0.322 MuHd_075 : 12.192 7.299 4.312 2.342 MuHd_095 : 10.408 18.059 3.184 4.004 MuHd_100 : 3.411 14.952 3.278 3.009 MuHd_105 : 9.578 11.812 5.155 2.812 Hmax_075 : 3.150 4.317 -1.106 2.532 Hmax_095 : 6.475 11.025 -0.019 3.728 Hmax_100 : 4.000 10.700 -0.158 3.620 Hmax_105 : 2.400 6.200 -0.864 2.928 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9918 0.0082 DFMC : 0.9962 0.0038
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 218 EDI_158830 METGLLGHAEQKAPTSLQKCILGLVALLIIFQAFVLIFIFTSGYVTLDNYQLSAQNIMDKAVQDVDEGLTQPTLPKSFVT 80 PYQLPRYCQYNRGTCWALATIGLLEQSYRDNGIRKGFLKDNEYLRLSPQAYAIDVLNQCALHPEACPGKEGINNSTEGGY 160 VEWLYAFTDLYDKVLPESACPYAEENEGQWECADKEKKQASNPIKFNVTSITTKRNIY 240 ................................................................................ 80 ................................................................................ 160 .......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_158830 12 LGHAEQK|AP 0.066 . EDI_158830 19 APTSLQK|CI 0.060 . EDI_158830 60 AQNIMDK|AV 0.095 . EDI_158830 76 TQPTLPK|SF 0.067 . EDI_158830 86 TPYQLPR|YC 0.113 . EDI_158830 92 RYCQYNR|GT 0.122 . EDI_158830 109 LLEQSYR|DN 0.122 . EDI_158830 114 YRDNGIR|KG 0.076 . EDI_158830 115 RDNGIRK|GF 0.087 . EDI_158830 119 IRKGFLK|DN 0.091 . EDI_158830 125 KDNEYLR|LS 0.081 . EDI_158830 149 PEACPGK|EG 0.059 . EDI_158830 173 FTDLYDK|VL 0.050 . EDI_158830 195 QWECADK|EK 0.064 . EDI_158830 197 ECADKEK|KQ 0.061 . EDI_158830 198 CADKEKK|QA 0.110 . EDI_158830 205 QASNPIK|FN 0.099 . EDI_158830 214 VTSITTK|RN 0.066 . EDI_158830 215 TSITTKR|NI 0.220 . ____________________________^_________________

  • Fasta :-

    >EDI_158830 ATGGAAACTGGTCTTCTTGGACATGCTGAACAAAAAGCACCAACCTCATTACAAAAATGT ATATTGGGGTTAGTTGCATTGTTAATTATTTTCCAAGCATTTGTACTTATTTTTATATTT ACTTCAGGATATGTTACACTTGATAATTATCAACTATCTGCACAAAACATAATGGATAAA GCCGTTCAAGATGTCGATGAGGGATTAACACAACCTACATTACCAAAATCATTTGTTACA CCTTATCAACTCCCACGATATTGTCAATATAATAGAGGAACATGTTGGGCATTAGCTACT ATTGGTCTTTTGGAACAATCATATAGAGATAATGGTATTAGAAAAGGATTCCTTAAAGAT AACGAATATCTTAGATTATCACCTCAAGCATATGCTATTGATGTCTTAAATCAATGTGCC CTTCATCCAGAAGCTTGTCCAGGTAAAGAAGGAATTAATAATTCTACAGAAGGAGGATAT GTAGAATGGTTATATGCATTCACTGATTTATATGATAAAGTTCTTCCAGAAAGTGCTTGT CCATATGCAGAAGAAAATGAAGGACAATGGGAATGTGCTGACAAAGAAAAGAAACAAGCA AGCAATCCAATAAAATTCAATGTTACTAGTATAACTACTAAGAGAAATATTTAT
  • Download Fasta

  • Fasta :-

    METGLLGHAEQKAPTSLQKCILGLVALLIIFQAFVLIFIFTSGYVTLDNYQLSAQNIMDK AVQDVDEGLTQPTLPKSFVTPYQLPRYCQYNRGTCWALATIGLLEQSYRDNGIRKGFLKD NEYLRLSPQAYAIDVLNQCALHPEACPGKEGINNSTEGGYVEWLYAFTDLYDKVLPESAC PYAEENEGQWECADKEKKQASNPIKFNVTSITTKRNIY

    No Results
    No Results
IDSitePositionGscoreIscore
EDI_158830T30.5430.059
IDSitePositionGscoreIscore
EDI_158830T30.5430.059
No Results

EDI_158830      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India