EDI_184800 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EDI_184800OTHER0.9978370.0005100.001653
No Results

  • Fasta :-

    >EDI_184800 MGQSIVKMLTFTPPPPSYFNHNFMMIRKRNRDGHIPVAIVKENEECTRCWTIVYSHGNSQ DLGMCLPFIENLAHQLKCNVVGYDYTGYGRNEGESSEINSVEDLRDVYNYLHNNGVSWER IVLMGHSLGGGVSISFASQECGKWEEVQEIEMNESFESKEEKKEEEIKEQKIGGMIIIST FTSICGVVSKYAGMVINDMFENITKLKHINIPVEVIHGREDELIGVDESVEIYNSIPEEM RYGYDIINGCKHNDILENEELIKVIKRFLEKL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_184800.fa Sequence name : EDI_184800 Sequence length : 272 VALUES OF COMPUTED PARAMETERS Coef20 : 3.406 CoefTot : -1.690 ChDiff : -17 ZoneTo : 31 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.141 1.994 0.514 0.724 MesoH : -0.876 0.329 -0.426 0.237 MuHd_075 : 21.677 15.781 6.842 5.358 MuHd_095 : 20.392 15.126 6.291 4.997 MuHd_100 : 20.408 16.098 6.411 5.541 MuHd_105 : 23.083 19.005 7.413 6.069 Hmax_075 : 14.400 7.700 1.285 4.640 Hmax_095 : 14.300 9.537 1.713 4.130 Hmax_100 : 15.500 10.300 1.783 4.290 Hmax_105 : 16.333 15.167 2.576 5.682 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7816 0.2184 DFMC : 0.7538 0.2462
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 272 EDI_184800 MGQSIVKMLTFTPPPPSYFNHNFMMIRKRNRDGHIPVAIVKENEECTRCWTIVYSHGNSQDLGMCLPFIENLAHQLKCNV 80 VGYDYTGYGRNEGESSEINSVEDLRDVYNYLHNNGVSWERIVLMGHSLGGGVSISFASQECGKWEEVQEIEMNESFESKE 160 EKKEEEIKEQKIGGMIIISTFTSICGVVSKYAGMVINDMFENITKLKHINIPVEVIHGREDELIGVDESVEIYNSIPEEM 240 RYGYDIINGCKHNDILENEELIKVIKRFLEKL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_184800 7 MGQSIVK|ML 0.059 . EDI_184800 27 HNFMMIR|KR 0.083 . EDI_184800 28 NFMMIRK|RN 0.078 . EDI_184800 29 FMMIRKR|NR 0.207 . EDI_184800 31 MIRKRNR|DG 0.116 . EDI_184800 41 IPVAIVK|EN 0.067 . EDI_184800 48 ENEECTR|CW 0.094 . EDI_184800 77 NLAHQLK|CN 0.068 . EDI_184800 90 DYTGYGR|NE 0.069 . EDI_184800 105 NSVEDLR|DV 0.146 . EDI_184800 120 NGVSWER|IV 0.093 . EDI_184800 143 ASQECGK|WE 0.073 . EDI_184800 159 NESFESK|EE 0.073 . EDI_184800 162 FESKEEK|KE 0.079 . EDI_184800 163 ESKEEKK|EE 0.108 . EDI_184800 168 KKEEEIK|EQ 0.068 . EDI_184800 171 EEIKEQK|IG 0.065 . EDI_184800 190 ICGVVSK|YA 0.115 . EDI_184800 205 MFENITK|LK 0.062 . EDI_184800 207 ENITKLK|HI 0.068 . EDI_184800 219 VEVIHGR|ED 0.099 . EDI_184800 241 SIPEEMR|YG 0.102 . EDI_184800 251 DIINGCK|HN 0.066 . EDI_184800 263 ENEELIK|VI 0.060 . EDI_184800 266 ELIKVIK|RF 0.060 . EDI_184800 267 LIKVIKR|FL 0.279 . EDI_184800 271 IKRFLEK|L- 0.066 . ____________________________^_________________

  • Fasta :-

    >EDI_184800 ATGGGTCAGTCAATTGTGAAGATGTTGACATTCACCCCACCCCCACCGTCCTACTTCAAC CATAACTTTATGATGATTAGAAAGAGAAATCGTGATGGACATATTCCAGTTGCAATAGTG AAAGAGAATGAGGAATGCACGAGGTGCTGGACAATAGTCTACAGTCATGGAAATTCACAA GATTTAGGTATGTGTTTACCATTCATAGAAAATCTAGCACATCAACTAAAATGTAATGTT GTTGGATATGATTACACAGGATATGGTAGAAATGAGGGAGAAAGCAGTGAAATAAATAGT GTAGAAGATCTTAGGGATGTGTATAATTATCTGCACAACAACGGAGTATCATGGGAACGA ATAGTGTTAATGGGACACTCTCTTGGAGGAGGAGTGAGTATTTCATTTGCAAGTCAGGAA TGTGGGAAATGGGAAGAGGTACAAGAGATTGAAATGAATGAAAGTTTTGAAAGTAAAGAA GAAAAGAAAGAAGAAGAAATAAAGGAACAAAAGATAGGGGGAATGATTATTATCTCAACA TTCACAAGCATTTGTGGAGTAGTAAGTAAATATGCAGGAATGGTAATAAATGATATGTTT GAAAATATAACAAAATTGAAACACATTAATATTCCAGTTGAAGTAATTCATGGGAGAGAG GATGAATTGATAGGAGTTGATGAGTCAGTAGAAATCTACAATTCAATTCCAGAAGAGATG AGATATGGATATGATATAATCAACGGATGTAAACATAATGACATTCTTGAAAATGAAGAA TTAATTAAAGTAATCAAAAGATTTCTTGAAAAACTTTAA
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  • Fasta :-

    MGQSIVKMLTFTPPPPSYFNHNFMMIRKRNRDGHIPVAIVKENEECTRCWTIVYSHGNSQ DLGMCLPFIENLAHQLKCNVVGYDYTGYGRNEGESSEINSVEDLRDVYNYLHNNGVSWER IVLMGHSLGGGVSISFASQECGKWEEVQEIEMNESFESKEEKKEEEIKEQKIGGMIIIST FTSICGVVSKYAGMVINDMFENITKLKHINIPVEVIHGREDELIGVDESVEIYNSIPEEM RYGYDIINGCKHNDILENEELIKVIKRFLEKL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_184800100 SSEINSVEDL0.997unspEDI_184800158 SESFESKEEK0.993unsp

EDI_184800      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India