EDI_191970 | 26S protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_191970OTHER0.9999810.0000050.000014
No Results

  • Fasta :-

    >EDI_191970 MEIEKQSEESALVKYYKHKIDQMTYEYSSELQNQRRLISKRNQLNDQVRRMKEELQLLSE PSCSVGEVIKAVGKDKVLVKSAQEGKYVVKVEAGIDIKSLKPNQRVALKSDTYSICKVLP NQVDPLVSLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL YGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFM DEIDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRP GRIDRKIEFPNPKEEARLDILKIHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGM FALRERRSHVTQEDFELAAAKVMKKDNNASVSLQQLWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_191970.fa Sequence name : EDI_191970 Sequence length : 398 VALUES OF COMPUTED PARAMETERS Coef20 : 3.135 CoefTot : 0.000 ChDiff : 4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.394 0.806 -0.054 0.428 MesoH : -0.744 0.197 -0.407 0.173 MuHd_075 : 22.054 11.255 6.217 3.671 MuHd_095 : 19.984 9.089 6.570 4.067 MuHd_100 : 9.049 1.380 1.655 1.760 MuHd_105 : 10.147 7.263 4.431 1.639 Hmax_075 : -9.333 1.100 -4.082 0.960 Hmax_095 : -6.600 1.000 -3.528 1.720 Hmax_100 : -12.300 -2.300 -6.352 0.740 Hmax_105 : -7.000 -0.350 -3.915 0.502 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8501 0.1499 DFMC : 0.8806 0.1194
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 398 EDI_191970 MEIEKQSEESALVKYYKHKIDQMTYEYSSELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIKAVGKDKVLVK 80 SAQEGKYVVKVEAGIDIKSLKPNQRVALKSDTYSICKVLPNQVDPLVSLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELP 160 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFM 240 DEIDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEARLDI 320 LKIHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGMFALRERRSHVTQEDFELAAAKVMKKDNNASVSLQQLWK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..............................................P............................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EDI_191970 5 --MEIEK|QS 0.060 . EDI_191970 14 EESALVK|YY 0.094 . EDI_191970 17 ALVKYYK|HK 0.078 . EDI_191970 19 VKYYKHK|ID 0.066 . EDI_191970 35 SELQNQR|RL 0.082 . EDI_191970 36 ELQNQRR|LI 0.152 . EDI_191970 40 QRRLISK|RN 0.061 . EDI_191970 41 RRLISKR|NQ 0.145 . EDI_191970 49 QLNDQVR|RM 0.095 . EDI_191970 50 LNDQVRR|MK 0.159 . EDI_191970 52 DQVRRMK|EE 0.103 . EDI_191970 70 SVGEVIK|AV 0.088 . EDI_191970 74 VIKAVGK|DK 0.064 . EDI_191970 76 KAVGKDK|VL 0.063 . EDI_191970 80 KDKVLVK|SA 0.100 . EDI_191970 86 KSAQEGK|YV 0.129 . EDI_191970 90 EGKYVVK|VE 0.058 . EDI_191970 98 EAGIDIK|SL 0.077 . EDI_191970 101 IDIKSLK|PN 0.065 . EDI_191970 105 SLKPNQR|VA 0.101 . EDI_191970 109 NQRVALK|SD 0.076 . EDI_191970 117 DTYSICK|VL 0.056 . EDI_191970 131 PLVSLMR|VE 0.069 . EDI_191970 134 SLMRVEK|VP 0.128 . EDI_191970 151 GLDQQIK|EI 0.073 . EDI_191970 154 QQIKEIK|EV 0.072 . EDI_191970 162 VIELPIK|HP 0.058 . EDI_191970 176 LGIAQPK|GV 0.085 . EDI_191970 188 GPPGTGK|TL 0.059 . EDI_191970 193 GKTLLAR|AV 0.134 . EDI_191970 205 TDCTFIR|VS 0.146 . EDI_191970 214 GTELVQK|YI 0.094 . EDI_191970 221 YIGEGSR|MV 0.115 . EDI_191970 224 EGSRMVR|EL 0.260 . EDI_191970 231 ELFVMAR|EH 0.090 . EDI_191970 250 DSIGSSR|IE 0.116 . EDI_191970 254 SSRIEGK|SG 0.160 . EDI_191970 263 GDSEVQR|TM 0.101 . EDI_191970 279 DGFEPTK|NI 0.063 . EDI_191970 282 EPTKNIK|VL 0.060 . EDI_191970 289 VLMATNR|ID 0.074 . EDI_191970 299 LDPALLR|PG 0.069 . EDI_191970 302 ALLRPGR|ID 0.229 . EDI_191970 305 RPGRIDR|KI 0.264 . EDI_191970 306 PGRIDRK|IE 0.075 . EDI_191970 313 IEFPNPK|EE 0.056 . EDI_191970 317 NPKEEAR|LD 0.096 . EDI_191970 322 ARLDILK|IH 0.067 . EDI_191970 326 ILKIHSK|KM 0.062 . EDI_191970 327 LKIHSKK|MN 0.099 . EDI_191970 332 KKMNLVR|GI 0.122 . EDI_191970 337 VRGIDLK|KI 0.070 . EDI_191970 338 RGIDLKK|IA 0.100 . EDI_191970 342 LKKIAER|LD 0.110 . EDI_191970 352 ASGAEIK|AC 0.074 . EDI_191970 364 AGMFALR|ER 0.079 . EDI_191970 366 MFALRER|RS 0.089 . EDI_191970 367 FALRERR|SH 0.616 *ProP* EDI_191970 381 FELAAAK|VM 0.058 . EDI_191970 384 AAAKVMK|KD 0.072 . EDI_191970 385 AAKVMKK|DN 0.129 . EDI_191970 398 SLQQLWK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >EDI_191970 ATGGAAATAGAGAAACAAAGTGAGGAAAGTGCATTGGTCAAATATTATAAGCATAAGATA GATCAAATGACATACGAGTATTCGAGTGAGTTACAAAATCAACGAAGATTAATTTCTAAA AGAAATCAATTAAATGACCAAGTAAGAAGAATGAAAGAAGAACTTCAATTACTTTCGGAA CCATCATGTTCAGTTGGAGAAGTTATCAAAGCAGTAGGAAAAGATAAGGTATTAGTTAAA TCAGCACAAGAAGGCAAATATGTTGTCAAAGTAGAAGCAGGAATTGATATAAAATCATTG AAACCAAATCAACGAGTGGCACTAAAAAGTGATACATACAGTATTTGTAAAGTTCTTCCT AATCAAGTTGATCCATTAGTATCATTAATGAGAGTAGAAAAAGTACCAGATTCAACATAT GACATGATTGGAGGATTAGATCAACAAATTAAAGAGATTAAAGAAGTAATTGAGTTACCA ATCAAACATCCAGAATTATTTGAATCACTTGGAATTGCACAACCAAAAGGTGTATTATTG TATGGACCACCAGGAACAGGAAAAACATTATTAGCAAGAGCAGTAGCACACCATACAGAT TGTACATTTATTCGAGTTTCAGGAACTGAGTTAGTACAAAAATATATTGGAGAAGGAAGT AGAATGGTTCGAGAACTATTTGTAATGGCAAGAGAACATGCACCATCTATTATTTTCATG GATGAGATAGACTCTATTGGATCGAGTCGAATTGAAGGAAAGTCAGGAGGAGATAGTGAA GTACAACGAACTATGCTAGAATTAGTTAATCAATTAGATGGGTTTGAACCAACAAAAAAT ATAAAAGTATTAATGGCAACAAATAGAATAGATATTTTAGATCCAGCATTATTAAGACCA GGACGAATTGATAGAAAAATCGAATTCCCTAATCCAAAAGAAGAAGCACGTTTAGACATT CTTAAGATTCATTCGAAGAAGATGAATTTAGTTCGTGGAATCGATCTCAAGAAAATTGCA GAACGATTGGATGGAGCATCTGGTGCAGAAATTAAAGCATGTTGCACAGAAGCAGGTATG TTTGCACTTCGGGAAAGAAGGTCTCATGTAACACAAGAAGATTTTGAATTAGCAGCTGCT AAAGTAATGAAGAAAGATAACAATGCATCTGTCTCATTACAACAATTATGGAAATAA
  • Download Fasta

  • Fasta :-

    MEIEKQSEESALVKYYKHKIDQMTYEYSSELQNQRRLISKRNQLNDQVRRMKEELQLLSE PSCSVGEVIKAVGKDKVLVKSAQEGKYVVKVEAGIDIKSLKPNQRVALKSDTYSICKVLP NQVDPLVSLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL YGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFM DEIDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRP GRIDRKIEFPNPKEEARLDILKIHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGM FALRERRSHVTQEDFELAAAKVMKKDNNASVSLQQLWK

  • title: ATP binding site
  • coordinates: P183,P184,G185,T186,G187,K188,T189,L190,D241,N288
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_191970249 SSIGSSRIEG0.993unspEDI_191970249 SSIGSSRIEG0.993unspEDI_191970249 SSIGSSRIEG0.993unspEDI_191970255 SIEGKSGGDS0.998unspEDI_191970138 SKVPDSTYDM0.997unspEDI_191970207 SFIRVSGTEL0.996unsp

EDI_191970      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India