EDI_192220 | minor histocompatibility antigen H13, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_192220OTHER0.9995100.0003980.000092
No Results

  • Fasta :-

    >EDI_192220 MDELLYLIVTLVVIHYLSSKNKLYYLKHNSNFVSKISMSWDDLVFVLFCGLIIMLVEYYF PSLSENLVFTIVYMLMSICLYLTIQPIVNNLPLHSFIIKKGVSITVVFIMVLIYIINPNW WLTNIIAMCITISIQTLLHFDKVHVPLALIVGLFIYDLIRIFRNCHIPFYDGKSVLKGLS KNSTAYRIPLYLEFYSMFSAGHFIIGLGDIIFPGIFISYLYCIDFLFKTRYFLIGVISYC FGIIGTILLIWNYQMGVPALLSIVPAMVILSLIYSIKTNTLRSVLSLSLKGGFDLLSQKL KGCTSTTEELTVQID
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_192220.fa Sequence name : EDI_192220 Sequence length : 315 VALUES OF COMPUTED PARAMETERS Coef20 : 4.090 CoefTot : 0.000 ChDiff : 4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.188 2.471 0.583 0.862 MesoH : 1.246 1.598 0.187 0.645 MuHd_075 : 13.296 13.494 4.214 2.313 MuHd_095 : 16.537 14.307 4.571 3.704 MuHd_100 : 14.045 8.501 2.186 2.221 MuHd_105 : 19.879 13.601 4.204 3.206 Hmax_075 : 17.267 23.800 4.536 6.907 Hmax_095 : 16.800 22.137 3.614 6.825 Hmax_100 : 14.500 18.800 1.508 6.040 Hmax_105 : 18.600 21.500 3.828 6.560 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7380 0.2620 DFMC : 0.9103 0.0897
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 315 EDI_192220 MDELLYLIVTLVVIHYLSSKNKLYYLKHNSNFVSKISMSWDDLVFVLFCGLIIMLVEYYFPSLSENLVFTIVYMLMSICL 80 YLTIQPIVNNLPLHSFIIKKGVSITVVFIMVLIYIINPNWWLTNIIAMCITISIQTLLHFDKVHVPLALIVGLFIYDLIR 160 IFRNCHIPFYDGKSVLKGLSKNSTAYRIPLYLEFYSMFSAGHFIIGLGDIIFPGIFISYLYCIDFLFKTRYFLIGVISYC 240 FGIIGTILLIWNYQMGVPALLSIVPAMVILSLIYSIKTNTLRSVLSLSLKGGFDLLSQKLKGCTSTTEELTVQID 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_192220 20 IHYLSSK|NK 0.059 . EDI_192220 22 YLSSKNK|LY 0.069 . EDI_192220 27 NKLYYLK|HN 0.063 . EDI_192220 35 NSNFVSK|IS 0.070 . EDI_192220 99 LHSFIIK|KG 0.064 . EDI_192220 100 HSFIIKK|GV 0.187 . EDI_192220 142 TLLHFDK|VH 0.056 . EDI_192220 160 FIYDLIR|IF 0.069 . EDI_192220 163 DLIRIFR|NC 0.188 . EDI_192220 173 IPFYDGK|SV 0.129 . EDI_192220 177 DGKSVLK|GL 0.068 . EDI_192220 181 VLKGLSK|NS 0.058 . EDI_192220 187 KNSTAYR|IP 0.094 . EDI_192220 228 CIDFLFK|TR 0.053 . EDI_192220 230 DFLFKTR|YF 0.085 . EDI_192220 277 SLIYSIK|TN 0.059 . EDI_192220 282 IKTNTLR|SV 0.108 . EDI_192220 290 VLSLSLK|GG 0.075 . EDI_192220 299 FDLLSQK|LK 0.057 . EDI_192220 301 LLSQKLK|GC 0.076 . ____________________________^_________________

  • Fasta :-

    >EDI_192220 ATGGACGAATTACTATATTTAATCGTTACACTTGTAGTAATTCATTATTTATCATCAAAA AACAAATTATATTACCTTAAGCACAATAGTAATTTTGTTTCAAAAATATCAATGAGTTGG GACGACTTAGTCTTTGTTCTGTTTTGTGGTTTAATAATTATGTTAGTAGAATATTACTTT CCATCACTCTCTGAGAATTTAGTTTTCACAATAGTATACATGTTAATGTCAATTTGTTTA TACCTAACCATTCAACCAATAGTCAACAATCTTCCCTTACATTCTTTTATTATTAAAAAA GGAGTATCAATTACAGTAGTTTTTATAATGGTTTTAATTTATATTATTAATCCAAATTGG TGGTTAACAAATATTATTGCAATGTGCATTACTATTTCAATTCAAACGTTATTACATTTT GATAAAGTTCATGTTCCATTGGCATTGATAGTAGGACTATTTATCTATGATTTAATACGA ATTTTTAGAAATTGTCATATTCCATTTTATGATGGTAAATCAGTTTTAAAAGGATTATCC AAAAATTCTACAGCATATCGGATACCATTATATCTTGAATTTTATAGCATGTTTAGTGCA GGACATTTTATTATTGGATTAGGTGATATTATTTTTCCAGGAATTTTCATTTCATACTTA TATTGTATCGACTTCTTATTTAAAACTCGTTATTTTCTAATTGGTGTCATTAGTTATTGT TTTGGAATAATTGGAACAATACTATTGATATGGAATTATCAAATGGGCGTACCTGCATTA CTGAGCATAGTTCCAGCAATGGTTATTCTATCACTTATTTATTCTATAAAAACTAACACA TTAAGAAGTGTACTTAGTCTTTCATTAAAAGGGGGGTTTGACTTATTATCTCAAAAATTA AAAGGGTGTACTAGTACAACAGAAGAACTAACTGTTCAAATAGATTAA
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  • Fasta :-

    MDELLYLIVTLVVIHYLSSKNKLYYLKHNSNFVSKISMSWDDLVFVLFCGLIIMLVEYYF PSLSENLVFTIVYMLMSICLYLTIQPIVNNLPLHSFIIKKGVSITVVFIMVLIYIINPNW WLTNIIAMCITISIQTLLHFDKVHVPLALIVGLFIYDLIRIFRNCHIPFYDGKSVLKGLS KNSTAYRIPLYLEFYSMFSAGHFIIGLGDIIFPGIFISYLYCIDFLFKTRYFLIGVISYC FGIIGTILLIWNYQMGVPALLSIVPAMVILSLIYSIKTNTLRSVLSLSLKGGFDLLSQKL KGCTSTTEELTVQID

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
EDI_19222039 SKISMSWDDL0.996unsp

EDI_192220      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India