EDI_201800 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
EDI_201800OTHER0.9974960.0023330.000171
No Results

  • Fasta :-

    >EDI_201800 MELSERIPPIGLVNNSYNGCYVNSCIQLLFSMKSFVSYLSFNSPSNEILQRIRLLFVDLI STTLQSINTFYFLDCYNPQYGDPNEFLTQILEHCNQCGYYEMSIRCDINCDCGKTDTVIS KEPVLLIRNNGIQLDLPTQLCLSLFREFHCSCGRTLNVELKPLNSPQYLIICVENIKIIN NQIEKQTKSISQNKEIIYNKSNYSLKSMITHINGYDNGHCKSYVKTQSGWYCCDDTNVYP WNEKLEEEVNEVVTTFLFEKKEEEPQSKPILSQQALLDYYLFLKRKQNNSNYS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_201800.fa Sequence name : EDI_201800 Sequence length : 293 VALUES OF COMPUTED PARAMETERS Coef20 : 3.312 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.141 1.253 0.065 0.451 MesoH : -0.169 0.392 -0.253 0.231 MuHd_075 : 17.676 12.821 5.019 4.482 MuHd_095 : 22.872 5.240 5.046 2.501 MuHd_100 : 12.800 6.698 2.218 1.717 MuHd_105 : 18.950 16.603 6.471 3.828 Hmax_075 : 5.600 9.900 0.113 4.340 Hmax_095 : 5.300 5.800 -0.181 3.240 Hmax_100 : 1.000 7.700 -1.370 3.080 Hmax_105 : 7.117 14.233 1.064 5.227 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9436 0.0564 DFMC : 0.9419 0.0581
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 293 EDI_201800 MELSERIPPIGLVNNSYNGCYVNSCIQLLFSMKSFVSYLSFNSPSNEILQRIRLLFVDLISTTLQSINTFYFLDCYNPQY 80 GDPNEFLTQILEHCNQCGYYEMSIRCDINCDCGKTDTVISKEPVLLIRNNGIQLDLPTQLCLSLFREFHCSCGRTLNVEL 160 KPLNSPQYLIICVENIKIINNQIEKQTKSISQNKEIIYNKSNYSLKSMITHINGYDNGHCKSYVKTQSGWYCCDDTNVYP 240 WNEKLEEEVNEVVTTFLFEKKEEEPQSKPILSQQALLDYYLFLKRKQNNSNYS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_201800 6 -MELSER|IP 0.073 . EDI_201800 33 QLLFSMK|SF 0.071 . EDI_201800 51 SNEILQR|IR 0.072 . EDI_201800 53 EILQRIR|LL 0.076 . EDI_201800 105 YYEMSIR|CD 0.076 . EDI_201800 114 INCDCGK|TD 0.061 . EDI_201800 121 TDTVISK|EP 0.057 . EDI_201800 128 EPVLLIR|NN 0.109 . EDI_201800 146 LCLSLFR|EF 0.070 . EDI_201800 154 FHCSCGR|TL 0.080 . EDI_201800 161 TLNVELK|PL 0.068 . EDI_201800 177 ICVENIK|II 0.061 . EDI_201800 185 INNQIEK|QT 0.063 . EDI_201800 188 QIEKQTK|SI 0.107 . EDI_201800 194 KSISQNK|EI 0.067 . EDI_201800 200 KEIIYNK|SN 0.073 . EDI_201800 206 KSNYSLK|SM 0.107 . EDI_201800 221 YDNGHCK|SY 0.098 . EDI_201800 225 HCKSYVK|TQ 0.057 . EDI_201800 244 VYPWNEK|LE 0.057 . EDI_201800 260 TTFLFEK|KE 0.059 . EDI_201800 261 TFLFEKK|EE 0.089 . EDI_201800 268 EEEPQSK|PI 0.065 . EDI_201800 284 DYYLFLK|RK 0.053 . EDI_201800 285 YYLFLKR|KQ 0.099 . EDI_201800 286 YLFLKRK|QN 0.078 . ____________________________^_________________

  • Fasta :-

    >EDI_201800 ATGGAATTATCTGAAAGAATTCCACCAATTGGTCTTGTTAATAACTCTTATAATGGATGT TATGTCAATAGCTGTATTCAGCTTTTATTTTCAATGAAGTCTTTTGTTTCTTACTTATCT TTTAATTCTCCAAGTAATGAAATATTACAAAGAATCCGCTTGCTTTTTGTTGACTTAATA AGTACTACTCTTCAGAGTATTAATACATTCTATTTCCTTGATTGTTATAATCCACAGTAT GGAGACCCAAACGAGTTTCTAACCCAAATATTAGAACATTGTAACCAGTGCGGTTATTAT GAAATGTCTATACGATGTGATATCAATTGTGATTGTGGAAAAACTGATACAGTTATTTCA AAAGAACCTGTCCTACTAATTAGAAATAATGGTATTCAACTTGATTTACCAACACAACTT TGTTTATCACTATTTAGAGAGTTCCATTGTTCTTGTGGAAGAACATTAAATGTTGAATTA AAGCCATTGAACTCTCCTCAATATCTCATTATTTGTGTTGAAAACATCAAAATAATAAAT AACCAAATAGAGAAACAAACAAAAAGTATTTCTCAGAACAAAGAAATTATATACAACAAA TCAAATTATTCTCTTAAATCAATGATAACTCATATAAATGGATATGACAATGGCCATTGT AAGAGCTATGTTAAAACACAAAGTGGATGGTATTGTTGTGACGATACTAATGTATACCCA TGGAACGAAAAATTAGAAGAGGAAGTAAATGAAGTTGTAACAACATTTCTATTTGAAAAA AAGGAAGAAGAACCTCAAAGCAAACCAATTTTATCTCAACAGGCATTGCTTGATTATTAC CTCTTTCTTAAAAGAAAACAAAATAATTCAAATTATTCTTAA
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  • Fasta :-

    MELSERIPPIGLVNNSYNGCYVNSCIQLLFSMKSFVSYLSFNSPSNEILQRIRLLFVDLI STTLQSINTFYFLDCYNPQYGDPNEFLTQILEHCNQCGYYEMSIRCDINCDCGKTDTVIS KEPVLLIRNNGIQLDLPTQLCLSLFREFHCSCGRTLNVELKPLNSPQYLIICVENIKIIN NQIEKQTKSISQNKEIIYNKSNYSLKSMITHINGYDNGHCKSYVKTQSGWYCCDDTNVYP WNEKLEEEVNEVVTTFLFEKKEEEPQSKPILSQQALLDYYLFLKRKQNNSNYS

  • title: Active Site
  • coordinates: N15,C20,H219,D235
No Results
No Results
No Results

EDI_201800      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India