EDI_204080 | ubiquitin carboxyl-terminal hydrolase isozyme L5, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_204080OTHER0.9999860.0000090.000005
No Results

  • Fasta :-

    >EDI_204080 MEEETFNWNTIESDPGVFNEMVKNLGCDDIQFKEIFSFDDSATFERIKPIKGFILLFEYN KQAINYIRNEYSFIETNEYPDIFFAEQVVQNACATQAILSTLMNIPNINLGPTLQQFKNQ TLPLNPHERGLAIGNNEIIRKTHNDFAQPSEILEHKISKKLKGVEGRAYHFISIIPYNGI LLLLDGLSEGPIIIGGADENWPITGMKPFFEGLISAMQGSLEFTLLAVVQDQIKKYQELY ENAIAEKNEYQIEIYKDIIDEEKKIKEQQHKENKRRKHDYMPLALNLILFLGKHHKLEQE VEKQINEITKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_204080.fa Sequence name : EDI_204080 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 2.919 CoefTot : 0.000 ChDiff : -13 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.241 1.665 0.147 0.693 MesoH : -0.059 0.586 -0.257 0.385 MuHd_075 : 22.176 11.770 6.696 3.340 MuHd_095 : 9.674 5.189 2.068 0.164 MuHd_100 : 6.080 3.971 0.690 1.299 MuHd_105 : 6.305 7.251 0.765 2.394 Hmax_075 : 14.467 7.233 1.070 3.803 Hmax_095 : -0.262 -0.000 -2.790 1.970 Hmax_100 : -1.100 0.300 -3.324 2.690 Hmax_105 : 1.050 2.900 -1.559 2.112 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9771 0.0229 DFMC : 0.9801 0.0199
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 EDI_204080 MEEETFNWNTIESDPGVFNEMVKNLGCDDIQFKEIFSFDDSATFERIKPIKGFILLFEYNKQAINYIRNEYSFIETNEYP 80 DIFFAEQVVQNACATQAILSTLMNIPNINLGPTLQQFKNQTLPLNPHERGLAIGNNEIIRKTHNDFAQPSEILEHKISKK 160 LKGVEGRAYHFISIIPYNGILLLLDGLSEGPIIIGGADENWPITGMKPFFEGLISAMQGSLEFTLLAVVQDQIKKYQELY 240 ENAIAEKNEYQIEIYKDIIDEEKKIKEQQHKENKRRKHDYMPLALNLILFLGKHHKLEQEVEKQINEITKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_204080 23 VFNEMVK|NL 0.068 . EDI_204080 33 CDDIQFK|EI 0.064 . EDI_204080 46 DSATFER|IK 0.090 . EDI_204080 48 ATFERIK|PI 0.062 . EDI_204080 51 ERIKPIK|GF 0.070 . EDI_204080 61 LLFEYNK|QA 0.070 . EDI_204080 68 QAINYIR|NE 0.086 . EDI_204080 118 PTLQQFK|NQ 0.053 . EDI_204080 129 PLNPHER|GL 0.131 . EDI_204080 140 GNNEIIR|KT 0.107 . EDI_204080 141 NNEIIRK|TH 0.070 . EDI_204080 156 SEILEHK|IS 0.061 . EDI_204080 159 LEHKISK|KL 0.075 . EDI_204080 160 EHKISKK|LK 0.121 . EDI_204080 162 KISKKLK|GV 0.143 . EDI_204080 167 LKGVEGR|AY 0.108 . EDI_204080 207 WPITGMK|PF 0.077 . EDI_204080 234 VVQDQIK|KY 0.058 . EDI_204080 235 VQDQIKK|YQ 0.100 . EDI_204080 247 ENAIAEK|NE 0.066 . EDI_204080 256 YQIEIYK|DI 0.079 . EDI_204080 263 DIIDEEK|KI 0.064 . EDI_204080 264 IIDEEKK|IK 0.100 . EDI_204080 266 DEEKKIK|EQ 0.066 . EDI_204080 271 IKEQQHK|EN 0.065 . EDI_204080 274 QQHKENK|RR 0.056 . EDI_204080 275 QHKENKR|RK 0.185 . EDI_204080 276 HKENKRR|KH 0.165 . EDI_204080 277 KENKRRK|HD 0.096 . EDI_204080 293 LILFLGK|HH 0.059 . EDI_204080 296 FLGKHHK|LE 0.073 . EDI_204080 303 LEQEVEK|QI 0.077 . EDI_204080 310 QINEITK|K- 0.071 . EDI_204080 311 INEITKK|-- 0.106 . ____________________________^_________________

  • Fasta :-

    >EDI_204080 ATGGAAGAAGAAACATTTAACTGGAATACCATTGAATCTGATCCTGGAGTATTTAATGAA ATGGTAAAAAATTTAGGATGTGATGACATTCAATTTAAAGAAATATTTTCTTTTGATGAC TCTGCTACTTTTGAACGAATTAAACCAATAAAAGGATTTATTTTATTATTTGAATACAAT AAACAAGCAATAAATTATATAAGAAATGAATATAGTTTTATTGAAACAAATGAATATCCT GATATTTTCTTTGCTGAACAAGTTGTTCAAAACGCATGTGCTACTCAAGCAATATTATCG ACATTAATGAACATCCCAAATATTAACCTAGGACCAACTTTACAACAATTTAAAAATCAG ACATTACCATTAAATCCTCATGAACGTGGATTGGCTATTGGAAATAATGAAATAATTAGA AAAACTCATAACGATTTTGCTCAACCATCTGAAATACTTGAACATAAAATATCAAAAAAA TTAAAAGGAGTAGAAGGACGTGCGTATCACTTTATTAGTATCATTCCATATAATGGTATA TTATTATTACTTGATGGACTTAGTGAAGGACCAATTATTATTGGGGGTGCTGATGAAAAT TGGCCTATAACAGGAATGAAACCATTTTTTGAAGGACTTATTAGTGCTATGCAAGGAAGT CTTGAATTTACATTATTAGCAGTGGTTCAAGACCAAATTAAGAAATATCAAGAATTATAT GAAAATGCTATTGCTGAGAAAAATGAATATCAAATAGAAATATATAAAGATATTATTGAT GAAGAAAAAAAAATTAAAGAACAACAACACAAAGAAAATAAAAGAAGAAAACATGATTAT ATGCCATTAGCATTAAATTTAATTCTATTTCTTGGAAAACATCATAAATTAGAACAAGAA GTAGAAAAACAAATAAATGAAATAACAAAGAAGTAA
  • Download Fasta

  • Fasta :-

    MEEETFNWNTIESDPGVFNEMVKNLGCDDIQFKEIFSFDDSATFERIKPIKGFILLFEYN KQAINYIRNEYSFIETNEYPDIFFAEQVVQNACATQAILSTLMNIPNINLGPTLQQFKNQ TLPLNPHERGLAIGNNEIIRKTHNDFAQPSEILEHKISKKLKGVEGRAYHFISIIPYNGI LLLLDGLSEGPIIIGGADENWPITGMKPFFEGLISAMQGSLEFTLLAVVQDQIKKYQELY ENAIAEKNEYQIEIYKDIIDEEKKIKEQQHKENKRRKHDYMPLALNLILFLGKHHKLEQE VEKQINEITKK

  • title: catalytic site
  • coordinates: Q87,C93,H170,D185
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EDI_204080      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India