EDI_243160 | cathepsin H precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_243160SP0.0671020.9328590.000039CS pos: 14-15. AFT-FD. Pr: 0.6796
No Results

  • Fasta :-

    >EDI_243160 MLFILLFTLSFAFTFDDWIRKYQYNKMNIEFELRKSIFEETTKKIKQLQNKGYLSISNDS PFSVFTEEEIDKMINSETFSLPQLRQKRLKTNKKTIQLINEFDWRNSGIITPIKSSGTRY FEATIDGIESAILLEKKGMYTNETLKLSVQQLVDCQDEFFGKKLGRTNPCFIYLQRFGFM KEEDYPETSEKGVCQYNSSRVFGKVNKRRYLSVFNDEELIEMIKQTPIIVNIDMPSTMPY YDGEGIFENVEECSQSLPRIGLLLIGYGKTINGVPYWILKNCWGPSWGSNGYLYLKRNKN VCGIYSYGTYIESITLY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_243160.fa Sequence name : EDI_243160 Sequence length : 317 VALUES OF COMPUTED PARAMETERS Coef20 : 4.867 CoefTot : 0.741 ChDiff : 2 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.318 1.659 0.117 0.674 MesoH : -0.460 0.119 -0.348 0.249 MuHd_075 : 12.798 4.500 3.391 0.709 MuHd_095 : 15.244 1.572 2.163 1.963 MuHd_100 : 15.701 5.493 2.214 1.985 MuHd_105 : 16.166 8.260 2.496 2.501 Hmax_075 : 19.833 16.683 2.849 6.487 Hmax_095 : 21.000 16.800 2.863 6.960 Hmax_100 : 21.000 16.900 2.768 6.960 Hmax_105 : 19.162 17.200 2.616 5.710 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9504 0.0496 DFMC : 0.9356 0.0644
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 317 EDI_243160 MLFILLFTLSFAFTFDDWIRKYQYNKMNIEFELRKSIFEETTKKIKQLQNKGYLSISNDSPFSVFTEEEIDKMINSETFS 80 LPQLRQKRLKTNKKTIQLINEFDWRNSGIITPIKSSGTRYFEATIDGIESAILLEKKGMYTNETLKLSVQQLVDCQDEFF 160 GKKLGRTNPCFIYLQRFGFMKEEDYPETSEKGVCQYNSSRVFGKVNKRRYLSVFNDEELIEMIKQTPIIVNIDMPSTMPY 240 YDGEGIFENVEECSQSLPRIGLLLIGYGKTINGVPYWILKNCWGPSWGSNGYLYLKRNKNVCGIYSYGTYIESITLY 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_243160 20 TFDDWIR|KY 0.080 . EDI_243160 21 FDDWIRK|YQ 0.079 . EDI_243160 26 RKYQYNK|MN 0.066 . EDI_243160 34 NIEFELR|KS 0.080 . EDI_243160 35 IEFELRK|SI 0.114 . EDI_243160 43 IFEETTK|KI 0.060 . EDI_243160 44 FEETTKK|IK 0.079 . EDI_243160 46 ETTKKIK|QL 0.063 . EDI_243160 51 IKQLQNK|GY 0.069 . EDI_243160 72 TEEEIDK|MI 0.069 . EDI_243160 85 FSLPQLR|QK 0.076 . EDI_243160 87 LPQLRQK|RL 0.068 . EDI_243160 88 PQLRQKR|LK 0.374 . EDI_243160 90 LRQKRLK|TN 0.074 . EDI_243160 93 KRLKTNK|KT 0.075 . EDI_243160 94 RLKTNKK|TI 0.092 . EDI_243160 105 INEFDWR|NS 0.110 . EDI_243160 114 GIITPIK|SS 0.088 . EDI_243160 119 IKSSGTR|YF 0.148 . EDI_243160 136 SAILLEK|KG 0.057 . EDI_243160 137 AILLEKK|GM 0.096 . EDI_243160 146 YTNETLK|LS 0.060 . EDI_243160 162 QDEFFGK|KL 0.075 . EDI_243160 163 DEFFGKK|LG 0.073 . EDI_243160 166 FGKKLGR|TN 0.075 . EDI_243160 176 CFIYLQR|FG 0.095 . EDI_243160 181 QRFGFMK|EE 0.074 . EDI_243160 191 YPETSEK|GV 0.103 . EDI_243160 200 CQYNSSR|VF 0.096 . EDI_243160 204 SSRVFGK|VN 0.070 . EDI_243160 207 VFGKVNK|RR 0.056 . EDI_243160 208 FGKVNKR|RY 0.127 . EDI_243160 209 GKVNKRR|YL 0.254 . EDI_243160 224 ELIEMIK|QT 0.060 . EDI_243160 259 CSQSLPR|IG 0.071 . EDI_243160 269 LLIGYGK|TI 0.065 . EDI_243160 280 VPYWILK|NC 0.056 . EDI_243160 296 NGYLYLK|RN 0.054 . EDI_243160 297 GYLYLKR|NK 0.126 . EDI_243160 299 LYLKRNK|NV 0.070 . ____________________________^_________________

  • Fasta :-

    >EDI_243160 ATGCTGTTTATTTTATTATTTACTCTTTCATTTGCTTTTACATTTGATGATTGGATTAGA AAATATCAATACAATAAAATGAACATTGAATTTGAATTAAGAAAATCTATTTTTGAAGAA ACAACAAAAAAGATAAAACAACTTCAAAACAAAGGATATTTAAGTATTTCAAATGACTCT CCTTTTTCAGTTTTTACTGAAGAAGAAATTGACAAAATGATTAACTCAGAAACATTTTCA TTACCACAACTACGTCAAAAAAGATTAAAAACTAATAAAAAAACAATTCAATTAATTAAC GAGTTTGATTGGAGAAATTCAGGAATTATTACTCCAATTAAATCAAGTGGCACAAGATAT TTTGAAGCAACAATTGATGGTATTGAATCAGCAATTCTTTTAGAGAAAAAAGGGATGTAT ACAAATGAGACATTAAAACTGTCAGTACAACAATTAGTTGACTGTCAAGATGAGTTTTTT GGAAAAAAGTTAGGTAGAACAAATCCATGTTTTATTTATTTACAAAGATTTGGATTTATG AAAGAAGAAGATTATCCTGAAACTTCAGAAAAAGGAGTTTGTCAATATAACTCATCTAGA GTTTTTGGTAAAGTAAATAAAAGAAGATATTTAAGTGTTTTTAATGATGAAGAATTAATA GAAATGATTAAACAAACACCAATAATAGTTAATATTGATATGCCATCAACAATGCCATAT TATGATGGAGAAGGAATATTTGAAAATGTAGAAGAATGTAGTCAATCATTACCAAGAATT GGACTATTATTAATTGGGTATGGAAAAACAATAAATGGAGTACCATATTGGATATTAAAA AATTGTTGGGGACCTTCATGGGGTTCAAATGGATATTTATATTTAAAAAGAAATAAAAAT GTATGTGGAATTTATTCATATGGAACATATATAGAAAGTATAACACTTTATTAA
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  • Fasta :-

    MLFILLFTLSFAFTFDDWIRKYQYNKMNIEFELRKSIFEETTKKIKQLQNKGYLSISNDS PFSVFTEEEIDKMINSETFSLPQLRQKRLKTNKKTIQLINEFDWRNSGIITPIKSSGTRY FEATIDGIESAILLEKKGMYTNETLKLSVQQLVDCQDEFFGKKLGRTNPCFIYLQRFGFM KEEDYPETSEKGVCQYNSSRVFGKVNKRRYLSVFNDEELIEMIKQTPIIVNIDMPSTMPY YDGEGIFENVEECSQSLPRIGLLLIGYGKTINGVPYWILKNCWGPSWGSNGYLYLKRNKN VCGIYSYGTYIESITLY

  • title: S2 subsite
  • coordinates: R166,T167,N231,P258,G261,Y307
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_24316036 SELRKSIFEE0.995unspEDI_243160212 SRRYLSVFND0.993unsp

EDI_243160      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India