EDI_245360 | calpain, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_245360OTHER0.9997810.0001500.000069
No Results

  • Fasta :-

    >EDI_245360 MFTDDEXXYENGIEPLDIQQGCLGDCYFLAALASLSEFPERIKTMIKSCGNGKYEITFFY MGKERHIVIDDLIPCNNGQPFFSHNNGDELWVMLLEKAYAKVVGSYGEIEGGIPFLALSD LTGMPVKRISTRETDVNRLFKKIADYDKKKYCMVANVPDTPGIDLEKEYGLVENHAYTLI GAYEVDGIKLLKIRNPWGCCEWKGKWRDDDPAWTESMKKKLEVVEANDGIYFMEIGDFVK FFDELTVVFYKKDWDCFNSVDVEMTDKQMAINFEGKGECIVSISQPRYDDKIAFRMWGID DKDQPIGGDSGETFVISSNLCGKKMKLGSGNHRMIVETHQSCVSKLPFKFTLSFRSENSI KIGAVVGIPATEKINYITKESSKNAEKCKACGAPLPAKGIAKTKIGSFHLKCFKCDNCGK QLGGKFGLRGQKKLCPDCVTKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_245360.fa Sequence name : EDI_245360 Sequence length : 442 VALUES OF COMPUTED PARAMETERS Coef20 : 2.710 CoefTot : 0.000 ChDiff : -2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.759 1.229 0.171 0.568 MesoH : -0.754 0.133 -0.444 0.235 MuHd_075 : 24.880 13.548 6.239 3.747 MuHd_095 : 15.595 7.991 4.154 2.413 MuHd_100 : 20.476 10.812 5.458 3.664 MuHd_105 : 24.923 12.160 6.890 4.465 Hmax_075 : 2.538 5.443 -1.037 3.089 Hmax_095 : -4.462 3.762 -2.341 2.870 Hmax_100 : 4.100 7.800 -0.372 4.180 Hmax_105 : 2.217 6.883 -0.755 4.317 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9684 0.0316 DFMC : 0.9784 0.0216
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 442 EDI_245360 MFTDDEXXYENGIEPLDIQQGCLGDCYFLAALASLSEFPERIKTMIKSCGNGKYEITFFYMGKERHIVIDDLIPCNNGQP 80 FFSHNNGDELWVMLLEKAYAKVVGSYGEIEGGIPFLALSDLTGMPVKRISTRETDVNRLFKKIADYDKKKYCMVANVPDT 160 PGIDLEKEYGLVENHAYTLIGAYEVDGIKLLKIRNPWGCCEWKGKWRDDDPAWTESMKKKLEVVEANDGIYFMEIGDFVK 240 FFDELTVVFYKKDWDCFNSVDVEMTDKQMAINFEGKGECIVSISQPRYDDKIAFRMWGIDDKDQPIGGDSGETFVISSNL 320 CGKKMKLGSGNHRMIVETHQSCVSKLPFKFTLSFRSENSIKIGAVVGIPATEKINYITKESSKNAEKCKACGAPLPAKGI 400 AKTKIGSFHLKCFKCDNCGKQLGGKFGLRGQKKLCPDCVTKK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_245360 41 LSEFPER|IK 0.091 . EDI_245360 43 EFPERIK|TM 0.054 . EDI_245360 47 RIKTMIK|SC 0.088 . EDI_245360 53 KSCGNGK|YE 0.067 . EDI_245360 63 TFFYMGK|ER 0.071 . EDI_245360 65 FYMGKER|HI 0.081 . EDI_245360 97 WVMLLEK|AY 0.067 . EDI_245360 101 LEKAYAK|VV 0.086 . EDI_245360 127 LTGMPVK|RI 0.074 . EDI_245360 128 TGMPVKR|IS 0.208 . EDI_245360 132 VKRISTR|ET 0.125 . EDI_245360 138 RETDVNR|LF 0.078 . EDI_245360 141 DVNRLFK|KI 0.138 . EDI_245360 142 VNRLFKK|IA 0.121 . EDI_245360 148 KIADYDK|KK 0.060 . EDI_245360 149 IADYDKK|KY 0.091 . EDI_245360 150 ADYDKKK|YC 0.108 . EDI_245360 167 PGIDLEK|EY 0.071 . EDI_245360 189 YEVDGIK|LL 0.054 . EDI_245360 192 DGIKLLK|IR 0.060 . EDI_245360 194 IKLLKIR|NP 0.081 . EDI_245360 203 WGCCEWK|GK 0.064 . EDI_245360 205 CCEWKGK|WR 0.074 . EDI_245360 207 EWKGKWR|DD 0.144 . EDI_245360 218 AWTESMK|KK 0.059 . EDI_245360 219 WTESMKK|KL 0.107 . EDI_245360 220 TESMKKK|LE 0.141 . EDI_245360 240 EIGDFVK|FF 0.068 . EDI_245360 251 LTVVFYK|KD 0.067 . EDI_245360 252 TVVFYKK|DW 0.134 . EDI_245360 267 DVEMTDK|QM 0.058 . EDI_245360 276 AINFEGK|GE 0.069 . EDI_245360 287 VSISQPR|YD 0.117 . EDI_245360 291 QPRYDDK|IA 0.076 . EDI_245360 295 DDKIAFR|MW 0.106 . EDI_245360 302 MWGIDDK|DQ 0.076 . EDI_245360 323 SSNLCGK|KM 0.062 . EDI_245360 324 SNLCGKK|MK 0.097 . EDI_245360 326 LCGKKMK|LG 0.079 . EDI_245360 333 LGSGNHR|MI 0.102 . EDI_245360 345 HQSCVSK|LP 0.075 . EDI_245360 349 VSKLPFK|FT 0.062 . EDI_245360 355 KFTLSFR|SE 0.102 . EDI_245360 361 RSENSIK|IG 0.064 . EDI_245360 373 GIPATEK|IN 0.058 . EDI_245360 379 KINYITK|ES 0.068 . EDI_245360 383 ITKESSK|NA 0.074 . EDI_245360 387 SSKNAEK|CK 0.062 . EDI_245360 389 KNAEKCK|AC 0.100 . EDI_245360 398 GAPLPAK|GI 0.069 . EDI_245360 402 PAKGIAK|TK 0.072 . EDI_245360 404 KGIAKTK|IG 0.075 . EDI_245360 411 IGSFHLK|CF 0.072 . EDI_245360 414 FHLKCFK|CD 0.057 . EDI_245360 420 KCDNCGK|QL 0.073 . EDI_245360 425 GKQLGGK|FG 0.065 . EDI_245360 429 GGKFGLR|GQ 0.082 . EDI_245360 432 FGLRGQK|KL 0.092 . EDI_245360 433 GLRGQKK|LC 0.110 . EDI_245360 441 CPDCVTK|K- 0.064 . EDI_245360 442 PDCVTKK|-- 0.100 . ____________________________^_________________

  • Fasta :-

    >EDI_245360 ATGTTTACTGATGATGAATTNNNNTATGAAAATGGAATTGAACCATTAGATATTCAGCAA GGATGTCTCGGAGATTGTTATTTTTTAGCTGCTTTAGCTTCTTTATCAGAATTTCCTGAA AGAATTAAAACTATGATTAAATCATGTGGAAATGGAAAATATGAAATAACATTTTTCTAT ATGGGAAAAGAAAGACATATTGTTATTGATGACTTAATTCCTTGTAATAATGGTCAACCA TTTTTTAGTCATAATAATGGAGATGAATTATGGGTAATGTTATTAGAGAAAGCATATGCT AAAGTTGTTGGTAGTTATGGAGAAATTGAAGGAGGAATTCCATTTTTAGCTTTAAGTGAT TTAACTGGAATGCCAGTAAAACGTATATCTACTAGAGAAACAGATGTTAATCGTTTATTT AAAAAAATTGCAGACTACGATAAAAAGAAATATTGTATGGTTGCTAATGTACCTGACACA CCTGGTATTGATCTTGAAAAAGAATATGGATTAGTAGAAAATCATGCATATACACTTATT GGGGCTTATGAAGTAGATGGAATTAAATTATTGAAAATTAGAAATCCGTGGGGATGTTGT GAGTGGAAAGGTAAGTGGAGAGATGATGATCCCGCTTGGACTGAATCAATGAAAAAGAAA TTAGAAGTTGTTGAAGCAAATGATGGAATTTATTTTATGGAAATTGGTGATTTTGTTAAA TTCTTTGATGAACTCACTGTTGTGTTTTATAAAAAAGATTGGGATTGTTTCAACAGTGTT GATGTTGAAATGACTGACAAGCAAATGGCTATTAATTTTGAAGGAAAAGGAGAGTGTATT GTCTCAATATCACAACCTCGTTATGATGATAAGATTGCATTTAGAATGTGGGGAATAGAT GATAAAGATCAACCTATTGGAGGTGATTCTGGAGAGACTTTTGTTATCTCATCTAATCTG TGTGGTAAAAAAATGAAGTTAGGAAGTGGAAATCATCGAATGATTGTTGAAACACATCAA AGTTGTGTGAGTAAATTACCATTTAAATTTACTCTTTCTTTTAGGTCAGAGAACAGTATT AAGATTGGTGCTGTTGTTGGTATTCCAGCCACAGAAAAAATTAATTATATAACAAAAGAG TCTTCAAAGAATGCAGAAAAATGTAAAGCATGTGGAGCACCATTACCAGCAAAAGGAATA GCCAAAACTAAAATTGGATCGTTCCATTTAAAATGCTTTAAATGTGATAATTGTGGTAAA CAACTTGGAGGAAAATTTGGGTTAAGAGGTCAAAAGAAATTATGTCCAGATTGTGTGACA AAAAAATGA
  • Download Fasta

  • Fasta :-

    MFTDDEXXYENGIEPLDIQQGCLGDCYFLAALASLSEFPERIKTMIKSCGNGKYEITFFY MGKERHIVIDDLIPCNNGQPFFSHNNGDELWVMLLEKAYAKVVGSYGEIEGGIPFLALSD LTGMPVKRISTRETDVNRLFKKIADYDKKKYCMVANVPDTPGIDLEKEYGLVENHAYTLI GAYEVDGIKLLKIRNPWGCCEWKGKWRDDDPAWTESMKKKLEVVEANDGIYFMEIGDFVK FFDELTVVFYKKDWDCFNSVDVEMTDKQMAINFEGKGECIVSISQPRYDDKIAFRMWGID DKDQPIGGDSGETFVISSNLCGKKMKLGSGNHRMIVETHQSCVSKLPFKFTLSFRSENSI KIGAVVGIPATEKINYITKESSKNAEKCKACGAPLPAKGIAKTKIGSFHLKCFKCDNCGK QLGGKFGLRGQKKLCPDCVTKK

  • title: catalytic site
  • coordinates: C26,H175,N195
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_245360130 SVKRISTRET0.998unspEDI_245360381 SITKESSKNA0.991unsp

EDI_245360      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India