EDI_251750 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EDI_251750OTHER0.9988450.0011390.000016
No Results

  • Fasta :-

    >EDI_251750 MDNTYLYPIGMGAYHTGVCIFGREYSFCDGGIFDTRPKDVEAPFRTSINMGIFRGNYKDL QYIVDSLRSEFAPGTYNLYNKNCNCFSNTLCLKLVQHPIPTWINRMAWYGNQFEKFFGIG PQTQQSTQITHSTSQIPSFGHKLSETPSSLPNNPEERRQMIIEQYKKTGIK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_251750.fa Sequence name : EDI_251750 Sequence length : 171 VALUES OF COMPUTED PARAMETERS Coef20 : 3.142 CoefTot : -1.937 ChDiff : 3 ZoneTo : 23 KR : 1 DE : 1 CleavSite : 26 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.347 0.959 0.180 0.580 MesoH : -0.526 -0.171 -0.465 0.095 MuHd_075 : 16.516 9.129 4.497 3.035 MuHd_095 : 20.685 16.049 5.329 6.150 MuHd_100 : 15.321 12.433 4.460 4.773 MuHd_105 : 8.633 9.989 4.174 2.227 Hmax_075 : 11.725 9.700 2.910 4.095 Hmax_095 : 16.500 16.600 3.579 6.680 Hmax_100 : 16.300 16.600 3.706 6.680 Hmax_105 : 10.200 19.133 5.314 5.775 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9459 0.0541 DFMC : 0.9749 0.0251
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 171 EDI_251750 MDNTYLYPIGMGAYHTGVCIFGREYSFCDGGIFDTRPKDVEAPFRTSINMGIFRGNYKDLQYIVDSLRSEFAPGTYNLYN 80 KNCNCFSNTLCLKLVQHPIPTWINRMAWYGNQFEKFFGIGPQTQQSTQITHSTSQIPSFGHKLSETPSSLPNNPEERRQM 160 IIEQYKKTGIK 240 ................................................................................ 80 ................................................................................ 160 ........... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_251750 23 GVCIFGR|EY 0.104 . EDI_251750 36 GGIFDTR|PK 0.087 . EDI_251750 38 IFDTRPK|DV 0.101 . EDI_251750 45 DVEAPFR|TS 0.078 . EDI_251750 54 INMGIFR|GN 0.107 . EDI_251750 58 IFRGNYK|DL 0.079 . EDI_251750 68 YIVDSLR|SE 0.093 . EDI_251750 81 TYNLYNK|NC 0.063 . EDI_251750 93 SNTLCLK|LV 0.070 . EDI_251750 105 IPTWINR|MA 0.133 . EDI_251750 115 YGNQFEK|FF 0.111 . EDI_251750 142 IPSFGHK|LS 0.065 . EDI_251750 157 PNNPEER|RQ 0.099 . EDI_251750 158 NNPEERR|QM 0.116 . EDI_251750 166 MIIEQYK|KT 0.077 . EDI_251750 167 IIEQYKK|TG 0.083 . EDI_251750 171 YKKTGIK|-- 0.064 . ____________________________^_________________

  • Fasta :-

    >EDI_251750 ATGGATAATACATACCTCTATCCTATCGGTATGGGAGCTTACCACACTGGTGTTTGTATC TTTGGTAGAGAATACTCATTTTGTGATGGTGGAATATTTGATACACGTCCTAAAGATGTA GAAGCACCATTTAGAACATCAATTAATATGGGAATATTTAGAGGAAATTATAAGGATTTG CAGTATATAGTTGATTCACTTCGTTCAGAATTTGCACCTGGAACATATAATTTGTATAAT AAAAATTGTAATTGTTTTTCAAATACACTTTGCCTAAAATTAGTACAACATCCCATTCCA ACATGGATTAACAGAATGGCTTGGTATGGAAATCAATTTGAGAAATTCTTTGGAATAGGT CCTCAAACTCAACAAAGTACGCAAATCACCCATTCTACCTCTCAAATTCCATCTTTTGGA CATAAACTATCAGAAACACCTTCATCACTTCCTAATAACCCTGAAGAAAGAAGACAAATG ATTATAGAACAATATAAGAAAACAGGAATAAAATAA
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  • Fasta :-

    MDNTYLYPIGMGAYHTGVCIFGREYSFCDGGIFDTRPKDVEAPFRTSINMGIFRGNYKDL QYIVDSLRSEFAPGTYNLYNKNCNCFSNTLCLKLVQHPIPTWINRMAWYGNQFEKFFGIG PQTQQSTQITHSTSQIPSFGHKLSETPSSLPNNPEERRQMIIEQYKKTGIK

    No Results
    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_251750T1330.6050.089EDI_251750T1460.5760.055EDI_251750S1340.5150.029
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_251750T1330.6050.089EDI_251750T1460.5760.055EDI_251750S1340.5150.029
No Results

EDI_251750      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India