EDI_259240 | chaperone Clpb, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_259240OTHER0.9990830.0001590.000757
No Results

  • Fasta :-

    >EDI_259240 MESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEG RLTDGRGRTVDFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLN RLDDIIVFSPLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYG ARPMRRYIEKTVVTSITKSIISGVMKEKNKIQIDYENDKIQVKITDK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_259240.fa Sequence name : EDI_259240 Sequence length : 227 VALUES OF COMPUTED PARAMETERS Coef20 : 3.068 CoefTot : -1.308 ChDiff : 4 ZoneTo : 19 KR : 1 DE : 1 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.576 1.176 -0.060 0.454 MesoH : -1.301 0.094 -0.543 0.095 MuHd_075 : 19.534 11.643 5.080 4.608 MuHd_095 : 15.073 16.439 4.645 4.682 MuHd_100 : 17.642 17.035 5.014 4.628 MuHd_105 : 18.885 15.461 4.917 4.495 Hmax_075 : 13.650 10.500 2.367 4.573 Hmax_095 : 8.487 10.800 1.298 4.095 Hmax_100 : 10.300 10.800 1.884 4.340 Hmax_105 : 10.850 13.000 2.080 4.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9837 0.0163 DFMC : 0.9886 0.0114
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 227 EDI_259240 MESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMT 80 SNLGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLNRLDDIIVFSPLSEKELKEIVKLQMGEVIKMIKKRYPLSEV 160 EMTEAAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIISGVMKEKNKIQIDYENDKIQVKITDK 240 ................................................................................ 80 ................................................................................ 160 ................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_259240 8 ESHSVSR|LI 0.119 . EDI_259240 30 QLTEAIR|RK 0.067 . EDI_259240 31 LTEAIRR|KP 0.091 . EDI_259240 32 TEAIRRK|PY 0.137 . EDI_259240 44 LFDEIEK|AH 0.057 . EDI_259240 61 QLLDEGR|LT 0.089 . EDI_259240 66 GRLTDGR|GR 0.081 . EDI_259240 68 LTDGRGR|TV 0.106 . EDI_259240 73 GRTVDFK|NT 0.073 . EDI_259240 90 GSEIIMK|GV 0.103 . EDI_259240 94 IMKGVER|EG 0.084 . EDI_259240 100 REGQVSR|KV 0.123 . EDI_259240 101 EGQVSRK|VK 0.109 . EDI_259240 103 QVSRKVK|ET 0.192 . EDI_259240 111 TVMEIVK|KT 0.061 . EDI_259240 112 VMEIVKK|TF 0.097 . EDI_259240 115 IVKKTFK|PE 0.057 . EDI_259240 121 KPEFLNR|LD 0.108 . EDI_259240 134 FSPLSEK|EL 0.059 . EDI_259240 137 LSEKELK|EI 0.069 . EDI_259240 141 ELKEIVK|LQ 0.059 . EDI_259240 149 QMGEVIK|MI 0.065 . EDI_259240 152 EVIKMIK|KR 0.055 . EDI_259240 153 VIKMIKK|RY 0.077 . EDI_259240 154 IKMIKKR|YP 0.270 . EDI_259240 172 AIEGIIK|SG 0.068 . EDI_259240 182 SIAYGAR|PM 0.092 . EDI_259240 185 YGARPMR|RY 0.220 . EDI_259240 186 GARPMRR|YI 0.301 . EDI_259240 190 MRRYIEK|TV 0.098 . EDI_259240 198 VVTSITK|SI 0.071 . EDI_259240 206 IISGVMK|EK 0.081 . EDI_259240 208 SGVMKEK|NK 0.067 . EDI_259240 210 VMKEKNK|IQ 0.069 . EDI_259240 219 IDYENDK|IQ 0.060 . EDI_259240 223 NDKIQVK|IT 0.071 . EDI_259240 227 QVKITDK|-- 0.062 . ____________________________^_________________

  • Fasta :-

    >EDI_259240 ATGGAAAGTCATAGTGTATCAAGATTAATAGGAGCACCACCAGGATATGTAGGATATGAA GAAGGAGGACAATTAACAGAGGCAATTCGTAGAAAACCATATAGTGTAATATTATTTGAT GAAATTGAAAAAGCACATCCACAAGTATTTAATGTATTATTACAATTATTAGATGAAGGA AGATTAACAGATGGAAGAGGAAGAACAGTTGATTTTAAGAATACTATTGTTATTATGACA TCAAATTTAGGAAGTGAAATAATAATGAAAGGAGTAGAAAGAGAAGGACAAGTTAGTAGA AAAGTTAAAGAAACAGTAATGGAAATAGTAAAGAAAACATTTAAACCAGAGTTTCTTAAT AGATTAGATGATATTATAGTATTCTCACCACTTTCAGAGAAAGAATTAAAAGAAATAGTT AAATTACAAATGGGAGAAGTGATTAAAATGATTAAAAAGAGATATCCATTAAGTGAAGTA GAAATGACAGAAGCAGCAATAGAAGGAATCATTAAATCAGGATATTCAATAGCATATGGA GCAAGACCAATGCGACGATATATAGAAAAGACAGTAGTAACTTCAATAACAAAATCAATA ATAAGTGGAGTGATGAAAGAGAAGAATAAAATTCAAATAGATTATGAAAATGATAAGATT CAAGTCAAAATAACAGATAAATAA
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  • Fasta :-

    MESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEG RLTDGRGRTVDFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLN RLDDIIVFSPLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYG ARPMRRYIEKTVVTSITKSIISGVMKEKNKIQIDYENDKIQVKITDK

  • title: Walker B motif
  • coordinates: V36,I37,L38,F39,D40,E41
IDSitePositionGscoreIscore
EDI_259240S30.5050.052
IDSitePositionGscoreIscore
EDI_259240S30.5050.052
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_25924099 SEGQVSRKVK0.992unspEDI_259240132 SFSPLSEKEL0.996unsp

EDI_259240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India