EDI_276390 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_276390OTHER0.9817610.0179730.000267
No Results

  • Fasta :-

    >EDI_276390 MKTLSPLTYGLNTEFNTMLFPCNKYNSMYSSDECKYCKTPCGSGCCTKISSSMYHKDGMI DLSVGSVRRAGHSMLVVGWNDEFPVERNRYSSPPIYTAAWNAIDNKTQTKLTKNNVEIPL DRWTKGGLILKNSYGEHGHTLGYFLQNHSLLNEDTICPLSIHPSRYYPLDVECIKSGNSF MNCSNDKLRKVSDGKIFYGATILKCKSELGNDYAKNLGFEECGTNKDYRYALSMEWFNVT FKRGVCKTREMGDGLIVYLARWVEGKMKETITEVHTQITSWDFIAQLFEMDTTVKNSEHC GYYFQPYDTIEYLISMYQHDGFESYGFSYYGIKWEQESYYKSSKRKGQFTEINKSTKKFV TPQFDGPFGGRIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_276390.fa Sequence name : EDI_276390 Sequence length : 373 VALUES OF COMPUTED PARAMETERS Coef20 : 3.953 CoefTot : -1.286 ChDiff : 3 ZoneTo : 31 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.500 0.724 0.092 0.338 MesoH : -0.720 -0.147 -0.380 0.145 MuHd_075 : 11.823 8.375 4.211 3.520 MuHd_095 : 21.081 23.536 7.885 6.268 MuHd_100 : 22.840 23.875 7.212 6.261 MuHd_105 : 21.966 22.504 6.490 5.790 Hmax_075 : 9.333 8.867 1.473 4.457 Hmax_095 : 18.113 16.188 1.896 5.372 Hmax_100 : 20.100 19.200 4.155 6.190 Hmax_105 : 10.412 12.075 0.097 4.366 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9279 0.0721 DFMC : 0.9479 0.0521
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 373 EDI_276390 MKTLSPLTYGLNTEFNTMLFPCNKYNSMYSSDECKYCKTPCGSGCCTKISSSMYHKDGMIDLSVGSVRRAGHSMLVVGWN 80 DEFPVERNRYSSPPIYTAAWNAIDNKTQTKLTKNNVEIPLDRWTKGGLILKNSYGEHGHTLGYFLQNHSLLNEDTICPLS 160 IHPSRYYPLDVECIKSGNSFMNCSNDKLRKVSDGKIFYGATILKCKSELGNDYAKNLGFEECGTNKDYRYALSMEWFNVT 240 FKRGVCKTREMGDGLIVYLARWVEGKMKETITEVHTQITSWDFIAQLFEMDTTVKNSEHCGYYFQPYDTIEYLISMYQHD 320 GFESYGFSYYGIKWEQESYYKSSKRKGQFTEINKSTKKFVTPQFDGPFGGRIN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_276390 2 -----MK|TL 0.071 . EDI_276390 24 MLFPCNK|YN 0.067 . EDI_276390 35 YSSDECK|YC 0.072 . EDI_276390 38 DECKYCK|TP 0.062 . EDI_276390 48 GSGCCTK|IS 0.068 . EDI_276390 56 SSSMYHK|DG 0.082 . EDI_276390 68 LSVGSVR|RA 0.129 . EDI_276390 69 SVGSVRR|AG 0.147 . EDI_276390 87 DEFPVER|NR 0.075 . EDI_276390 89 FPVERNR|YS 0.101 . EDI_276390 106 WNAIDNK|TQ 0.061 . EDI_276390 110 DNKTQTK|LT 0.062 . EDI_276390 113 TQTKLTK|NN 0.065 . EDI_276390 122 VEIPLDR|WT 0.093 . EDI_276390 125 PLDRWTK|GG 0.097 . EDI_276390 131 KGGLILK|NS 0.058 . EDI_276390 165 LSIHPSR|YY 0.089 . EDI_276390 175 LDVECIK|SG 0.070 . EDI_276390 187 MNCSNDK|LR 0.057 . EDI_276390 189 CSNDKLR|KV 0.192 . EDI_276390 190 SNDKLRK|VS 0.094 . EDI_276390 195 RKVSDGK|IF 0.062 . EDI_276390 204 YGATILK|CK 0.064 . EDI_276390 206 ATILKCK|SE 0.067 . EDI_276390 215 LGNDYAK|NL 0.083 . EDI_276390 226 EECGTNK|DY 0.078 . EDI_276390 229 GTNKDYR|YA 0.143 . EDI_276390 242 WFNVTFK|RG 0.059 . EDI_276390 243 FNVTFKR|GV 0.494 . EDI_276390 247 FKRGVCK|TR 0.074 . EDI_276390 249 RGVCKTR|EM 0.145 . EDI_276390 261 LIVYLAR|WV 0.162 . EDI_276390 266 ARWVEGK|MK 0.088 . EDI_276390 268 WVEGKMK|ET 0.079 . EDI_276390 295 EMDTTVK|NS 0.061 . EDI_276390 333 FSYYGIK|WE 0.057 . EDI_276390 341 EQESYYK|SS 0.072 . EDI_276390 344 SYYKSSK|RK 0.067 . EDI_276390 345 YYKSSKR|KG 0.129 . EDI_276390 346 YKSSKRK|GQ 0.155 . EDI_276390 354 QFTEINK|ST 0.064 . EDI_276390 357 EINKSTK|KF 0.066 . EDI_276390 358 INKSTKK|FV 0.237 . EDI_276390 371 DGPFGGR|IN 0.076 . ____________________________^_________________

  • Fasta :-

    >EDI_276390 ATGAAAACACTTTCTCCTTTAACATACGGATTAAACACTGAATTTAATACAATGCTTTTC CCTTGTAACAAATATAATTCAATGTATTCATCTGATGAATGTAAATATTGTAAAACTCCT TGTGGCTCAGGGTGTTGTACAAAAATATCATCATCAATGTACCATAAAGATGGTATGATT GATCTTTCAGTTGGAAGTGTACGAAGGGCTGGACATTCAATGCTTGTAGTTGGATGGAAT GATGAATTTCCTGTAGAAAGAAATAGATATTCATCTCCTCCAATATACACTGCAGCATGG AATGCTATTGACAATAAAACACAAACTAAACTAACAAAAAATAATGTTGAAATACCATTA GATCGATGGACAAAAGGTGGACTAATACTAAAGAATAGTTATGGAGAGCATGGTCATACA TTAGGATATTTTCTTCAGAACCATTCTTTATTGAATGAAGATACAATTTGTCCATTAAGT ATTCACCCAAGTAGATATTATCCACTTGATGTAGAGTGTATTAAAAGTGGAAATAGTTTT ATGAATTGTTCAAATGATAAACTACGTAAAGTGAGTGATGGAAAAATATTTTATGGAGCA ACAATACTTAAATGTAAGAGTGAATTAGGTAACGATTATGCTAAAAATCTTGGATTTGAG GAATGTGGTACTAATAAAGATTATAGATACGCACTATCCATGGAATGGTTTAATGTCACT TTTAAACGTGGAGTATGCAAAACTAGAGAGATGGGAGATGGACTTATTGTTTATTTAGCA AGATGGGTAGAAGGGAAAATGAAAGAAACGATCACAGAAGTACATACTCAAATTACTTCG TGGGATTTTATTGCACAATTATTTGAAATGGATACTACAGTTAAGAACTCAGAACATTGT GGGTATTATTTCCAACCTTATGATACTATTGAATACTTAATTTCAATGTATCAACATGAT GGATTTGAATCATATGGATTTTCTTATTACGGCATCAAATGGGAACAAGAGTCATATTAT AAATCCTCGAAAAGAAAAGGACAATTTACAGAAATCAATAAATCAACAAAAAAGTTTGTT ACACCTCAATTTGATGGGCCTTTTGGTGGTCGTATAAATTAA
  • Download Fasta

  • Fasta :-

    MKTLSPLTYGLNTEFNTMLFPCNKYNSMYSSDECKYCKTPCGSGCCTKISSSMYHKDGMI DLSVGSVRRAGHSMLVVGWNDEFPVERNRYSSPPIYTAAWNAIDNKTQTKLTKNNVEIPL DRWTKGGLILKNSYGEHGHTLGYFLQNHSLLNEDTICPLSIHPSRYYPLDVECIKSGNSF MNCSNDKLRKVSDGKIFYGATILKCKSELGNDYAKNLGFEECGTNKDYRYALSMEWFNVT FKRGVCKTREMGDGLIVYLARWVEGKMKETITEVHTQITSWDFIAQLFEMDTTVKNSEHC GYYFQPYDTIEYLISMYQHDGFESYGFSYYGIKWEQESYYKSSKRKGQFTEINKSTKKFV TPQFDGPFGGRIN

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EDI_276390355 SEINKSTKKF0.992unsp

EDI_276390      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India