EDI_276460 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_276460OTHER0.9998950.0000360.000070
No Results

  • Fasta :-

    >EDI_276460 MKWKEASFVHNEFNSNGIIIKMDNYIVGLTNKYGWNIHQNDVIEMKTIKRNGELIQIQSK EVNIITVKIEEDIINKEERQLFEKYLMIEYQMCDDIEWNENTVGSEISDEVIIRYGDSTN GPSILQHIEIKAKVIERYYHLNSLIGCIVQPHSPRNSSGCFVMNCKSQVIGLILFTDTRK NTTTIININLVINAIGNFNELVTDNSTGIYKIRSRNREGSCCGIKHWGEKTMFVTTSHLL ENRYSPVEIINPITQQVIQGRILFYSWCFDLIVISAHTKMKIIAENKIKISLTNNSTKKH IGYPVNINNLKEVEGQICSTSLKGKELIHCTYCSIVDGMSGGGLIDNGKFIGMLQSCDNE FSYSLSSEIIDEIIKGIEQEKTEEEIQNEMMEYGILEESILGAGSYYSYRSY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_276460.fa Sequence name : EDI_276460 Sequence length : 412 VALUES OF COMPUTED PARAMETERS Coef20 : 3.644 CoefTot : -0.226 ChDiff : -11 ZoneTo : 4 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.171 1.471 0.155 0.598 MesoH : -0.461 0.315 -0.329 0.187 MuHd_075 : 14.809 14.769 4.685 4.957 MuHd_095 : 9.723 6.660 1.734 2.360 MuHd_100 : 12.967 2.662 2.130 1.985 MuHd_105 : 13.618 2.562 1.945 1.661 Hmax_075 : 7.200 9.100 -1.165 4.690 Hmax_095 : -3.700 2.013 -4.049 2.065 Hmax_100 : 1.000 0.400 -3.688 2.310 Hmax_105 : 6.767 0.800 -2.717 3.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9547 0.0453 DFMC : 0.9645 0.0355
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 412 EDI_276460 MKWKEASFVHNEFNSNGIIIKMDNYIVGLTNKYGWNIHQNDVIEMKTIKRNGELIQIQSKEVNIITVKIEEDIINKEERQ 80 LFEKYLMIEYQMCDDIEWNENTVGSEISDEVIIRYGDSTNGPSILQHIEIKAKVIERYYHLNSLIGCIVQPHSPRNSSGC 160 FVMNCKSQVIGLILFTDTRKNTTTIININLVINAIGNFNELVTDNSTGIYKIRSRNREGSCCGIKHWGEKTMFVTTSHLL 240 ENRYSPVEIINPITQQVIQGRILFYSWCFDLIVISAHTKMKIIAENKIKISLTNNSTKKHIGYPVNINNLKEVEGQICST 320 SLKGKELIHCTYCSIVDGMSGGGLIDNGKFIGMLQSCDNEFSYSLSSEIIDEIIKGIEQEKTEEEIQNEMMEYGILEESI 400 LGAGSYYSYRSY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_276460 2 -----MK|WK 0.078 . EDI_276460 4 ---MKWK|EA 0.085 . EDI_276460 21 SNGIIIK|MD 0.067 . EDI_276460 32 IVGLTNK|YG 0.060 . EDI_276460 46 NDVIEMK|TI 0.067 . EDI_276460 49 IEMKTIK|RN 0.066 . EDI_276460 50 EMKTIKR|NG 0.138 . EDI_276460 60 LIQIQSK|EV 0.075 . EDI_276460 68 VNIITVK|IE 0.064 . EDI_276460 76 EEDIINK|EE 0.053 . EDI_276460 79 IINKEER|QL 0.130 . EDI_276460 84 ERQLFEK|YL 0.079 . EDI_276460 114 SDEVIIR|YG 0.086 . EDI_276460 131 LQHIEIK|AK 0.065 . EDI_276460 133 HIEIKAK|VI 0.073 . EDI_276460 137 KAKVIER|YY 0.086 . EDI_276460 155 VQPHSPR|NS 0.104 . EDI_276460 166 CFVMNCK|SQ 0.070 . EDI_276460 179 ILFTDTR|KN 0.076 . EDI_276460 180 LFTDTRK|NT 0.079 . EDI_276460 211 NSTGIYK|IR 0.062 . EDI_276460 213 TGIYKIR|SR 0.155 . EDI_276460 215 IYKIRSR|NR 0.081 . EDI_276460 217 KIRSRNR|EG 0.093 . EDI_276460 225 GSCCGIK|HW 0.077 . EDI_276460 230 IKHWGEK|TM 0.065 . EDI_276460 243 SHLLENR|YS 0.078 . EDI_276460 261 QQVIQGR|IL 0.092 . EDI_276460 279 VISAHTK|MK 0.078 . EDI_276460 281 SAHTKMK|II 0.074 . EDI_276460 287 KIIAENK|IK 0.057 . EDI_276460 289 IAENKIK|IS 0.066 . EDI_276460 298 LTNNSTK|KH 0.069 . EDI_276460 299 TNNSTKK|HI 0.152 . EDI_276460 311 VNINNLK|EV 0.087 . EDI_276460 323 ICSTSLK|GK 0.074 . EDI_276460 325 STSLKGK|EL 0.085 . EDI_276460 349 GLIDNGK|FI 0.077 . EDI_276460 375 IIDEIIK|GI 0.068 . EDI_276460 381 KGIEQEK|TE 0.068 . EDI_276460 410 GSYYSYR|SY 0.163 . ____________________________^_________________

  • Fasta :-

    >EDI_276460 ATGAAATGGAAAGAAGCAAGTTTTGTTCATAATGAATTTAATTCAAATGGAATTATCATA AAAATGGATAATTACATTGTTGGATTAACCAATAAATATGGGTGGAATATTCATCAGAAT GATGTTATTGAAATGAAAACTATAAAGAGAAATGGTGAACTAATTCAAATTCAAAGTAAA GAAGTTAATATCATCACTGTTAAAATAGAAGAAGACATTATTAATAAAGAAGAAAGACAA CTTTTTGAGAAGTATTTAATGATTGAATACCAGATGTGTGATGATATAGAATGGAATGAA AATACTGTAGGTAGTGAGATTAGTGATGAAGTGATAATAAGGTATGGAGATTCTACTAAT GGACCATCTATTTTACAGCACATTGAAATCAAAGCAAAAGTCATAGAAAGGTATTATCAT TTAAATTCACTTATTGGATGTATTGTTCAACCACACTCACCTCGAAATTCTAGTGGATGT TTTGTTATGAATTGTAAAAGTCAAGTTATTGGTTTAATTCTTTTTACAGACACAAGAAAA AATACAACAACAATTATCAATATTAATCTTGTTATAAATGCAATAGGAAATTTCAATGAG TTAGTTACTGATAATTCAACTGGAATTTATAAAATAAGAAGTAGAAATCGAGAAGGAAGT TGTTGTGGAATAAAACACTGGGGAGAAAAAACAATGTTTGTTACAACATCTCATTTACTT GAAAACAGATATTCCCCAGTAGAAATTATTAATCCAATAACACAACAAGTTATTCAAGGA AGGATTTTGTTTTATTCATGGTGTTTTGATCTTATTGTGATTAGTGCTCATACAAAGATG AAAATTATTGCAGAAAACAAAATAAAGATTAGTTTAACAAATAATAGTACAAAGAAACAT ATTGGATATCCAGTCAATATAAATAATTTAAAAGAAGTAGAAGGGCAAATATGTAGTACA TCTCTCAAAGGAAAAGAACTTATTCATTGTACATATTGTAGTATTGTTGATGGGATGAGT GGTGGTGGATTAATTGACAATGGAAAGTTTATTGGAATGCTTCAGAGTTGTGATAATGAA TTTAGTTATTCATTAAGTTCTGAAATCATCGATGAAATTATCAAAGGGATTGAACAAGAA AAAACAGAAGAAGAGATTCAAAATGAAATGATGGAATATGGTATTCTTGAAGAAAGTATT CTTGGAGCTGGTTCATATTATTCGTATCGGTCATACTAA
  • Download Fasta

  • Fasta :-

    MKWKEASFVHNEFNSNGIIIKMDNYIVGLTNKYGWNIHQNDVIEMKTIKRNGELIQIQSK EVNIITVKIEEDIINKEERQLFEKYLMIEYQMCDDIEWNENTVGSEISDEVIIRYGDSTN GPSILQHIEIKAKVIERYYHLNSLIGCIVQPHSPRNSSGCFVMNCKSQVIGLILFTDTRK NTTTIININLVINAIGNFNELVTDNSTGIYKIRSRNREGSCCGIKHWGEKTMFVTTSHLL ENRYSPVEIINPITQQVIQGRILFYSWCFDLIVISAHTKMKIIAENKIKISLTNNSTKKH IGYPVNINNLKEVEGQICSTSLKGKELIHCTYCSIVDGMSGGGLIDNGKFIGMLQSCDNE FSYSLSSEIIDEIIKGIEQEKTEEEIQNEMMEYGILEESILGAGSYYSYRSY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_276460153 SVQPHSPRNS0.997unspEDI_276460245 SENRYSPVEI0.992unsp

EDI_276460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India