EDI_278410 | sentrin-specific protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_278410OTHER0.9999150.0000830.000003
No Results

  • Fasta :-

    >EDI_278410 MSISSIGDVTLYPCDEKLVKNGWFNDNLISYQIEYIKKEFPLKDALIIDPLGYVLLSLGD DKQLLNDLNAKEYHHLIITVNDLTDNNSVNNGSHWTLLYIDLFSKMGYYYDSVPSHSTFH AEVLLDKISLFFGFPITFYKAHCPLQTNGLDCGPHVLANIYALCILLKDNIRSFEVLHPP YTASEIRSLVYSEIHHL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_278410.fa Sequence name : EDI_278410 Sequence length : 197 VALUES OF COMPUTED PARAMETERS Coef20 : 3.632 CoefTot : 0.086 ChDiff : -10 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.018 1.388 0.126 0.602 MesoH : 0.019 0.482 -0.248 0.328 MuHd_075 : 13.460 7.418 5.332 0.648 MuHd_095 : 22.940 17.712 8.042 4.171 MuHd_100 : 16.907 13.190 6.162 2.884 MuHd_105 : 10.720 6.042 3.490 1.242 Hmax_075 : 11.433 9.567 3.300 2.930 Hmax_095 : 14.525 15.050 4.333 4.847 Hmax_100 : 13.500 12.700 3.981 4.140 Hmax_105 : 3.800 8.517 0.926 3.617 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9645 0.0355 DFMC : 0.9548 0.0452
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 197 EDI_278410 MSISSIGDVTLYPCDEKLVKNGWFNDNLISYQIEYIKKEFPLKDALIIDPLGYVLLSLGDDKQLLNDLNAKEYHHLIITV 80 NDLTDNNSVNNGSHWTLLYIDLFSKMGYYYDSVPSHSTFHAEVLLDKISLFFGFPITFYKAHCPLQTNGLDCGPHVLANI 160 YALCILLKDNIRSFEVLHPPYTASEIRSLVYSEIHHL 240 ................................................................................ 80 ................................................................................ 160 ..................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_278410 17 LYPCDEK|LV 0.061 . EDI_278410 20 CDEKLVK|NG 0.055 . EDI_278410 37 YQIEYIK|KE 0.058 . EDI_278410 38 QIEYIKK|EF 0.074 . EDI_278410 43 KKEFPLK|DA 0.080 . EDI_278410 62 LSLGDDK|QL 0.060 . EDI_278410 71 LNDLNAK|EY 0.068 . EDI_278410 105 YIDLFSK|MG 0.054 . EDI_278410 127 AEVLLDK|IS 0.055 . EDI_278410 140 FPITFYK|AH 0.070 . EDI_278410 168 ALCILLK|DN 0.071 . EDI_278410 172 LLKDNIR|SF 0.108 . EDI_278410 187 YTASEIR|SL 0.159 . ____________________________^_________________

  • Fasta :-

    >EDI_278410 ATGAGTATTTCTTCAATAGGTGATGTCACTTTATATCCTTGTGATGAAAAACTTGTAAAA AATGGATGGTTTAATGATAACTTGATTTCATATCAAATTGAATACATCAAAAAAGAATTT CCATTGAAAGATGCTTTGATAATTGATCCATTAGGATATGTGTTATTAAGTCTTGGGGAT GATAAACAATTGTTAAATGATTTAAACGCAAAAGAATACCATCATTTAATTATCACAGTT AATGATTTAACTGATAACAATAGTGTAAATAACGGATCTCATTGGACACTTCTTTATATT GATTTATTTTCCAAAATGGGATATTACTATGACAGCGTTCCCTCTCATTCTACTTTTCAT GCAGAAGTTCTTCTAGATAAAATATCTCTTTTCTTTGGCTTTCCTATTACTTTTTATAAG GCACATTGTCCTCTTCAAACAAATGGACTTGACTGTGGACCTCATGTTTTAGCAAATATT TATGCGTTATGTATTTTATTAAAGGATAACATACGTAGCTTTGAAGTACTTCATCCACCT TATACTGCTTCAGAAATCCGTTCATTAGTGTACTCAGAGATTCATCACCTTTAA
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  • Fasta :-

    MSISSIGDVTLYPCDEKLVKNGWFNDNLISYQIEYIKKEFPLKDALIIDPLGYVLLSLGD DKQLLNDLNAKEYHHLIITVNDLTDNNSVNNGSHWTLLYIDLFSKMGYYYDSVPSHSTFH AEVLLDKISLFFGFPITFYKAHCPLQTNGLDCGPHVLANIYALCILLKDNIRSFEVLHPP YTASEIRSLVYSEIHHL

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EDI_278410      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India